Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq25 84.2 3e-11 >seq25 Length=1288025 Score = 84.2 bits (92), Expect = 3e-11 Identities = 154/226 (68%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || ||||| || || || || || || |||| || || | | | Sbjct 1056603 TGCAGATCTTTGTCAAGACATTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCTTCTG 1056662 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| | ||||| || || || ||| ||| || ||||||||||| ||||| | Sbjct 1056663 ATACTATCGAGAATGTTAAGGCCAAGATTCAAGATAAGGAGGGCATTCCACCAGATCAGC 1056722 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | || ||||| || ||||| | || ||| | | || || | |||||||| | Sbjct 1056723 AGCGTTTGATCTTTGCTGGCAAACAGCTGGAAGATGGTCGTACCTTGTCTGATTATAACA 1056782 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || || ||||| || | || ||||| | || | |||||||| Sbjct 1056783 TCCAGAAGGAATCTACCCTGCACTTAGTCCTCCGTCTGAGAGGAGG 1056828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786115436763120