Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq110 89.7 8e-13 >seq110 Length=421644 Score = 89.7 bits (98), Expect = 8e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 161402 GGCGTAGCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATG 161461 || || ||||| || |||| |||||||| |||| || ||| ||||| ||| ||| Sbjct 51245 GGTGTTGCTAAGCTTTATGCCTATTGGATCGTAACTAATTACCGAGAGGCTTACAACATG 51304 Query 161462 CACGCCAGTAGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTA 161521 ||| ||| ||||||||| ||||||||||| || || || |||||||| |||||| Sbjct 51305 TTCGCTTGTAATGGTATTCTCTTCAACCATGAAAGTCCTCGTCGTGGTGAGACCTTCGTA 51364 Query 161522 ACCCGTAAGATTAC 161535 ||| | ||||| || Sbjct 51365 ACCAGAAAGATCAC 51378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729882282313680