Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= NC_030940.1 Length=32637 Score E Sequences producing significant alignments: (Bits) Value seq3421 82.4 2e-11 >seq3421 Length=34251 Score = 82.4 bits (90), Expect = 2e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 3086 TGGGCATAGCGCATGGTCATCTGTAGCGAGGCATGGCCCAGGACCCGCTGCAACGTGATG 3145 || ||||||||||||||||| | | || ||||||||||| | ||||| |||| | Sbjct 33669 TGTGCATAGCGCATGGTCATGGCCAAGGTGGTATGGCCCAGGATCTTCTGCAGTGTGAGG 33610 Query 3146 ATGTCGCCACCGTTGCGCATGTAGTGGCTCGCGAACGTGTGCCGCAGGACGTG 3198 |||| ||| ||| | | | |||| || |||||||| |||||||||||||| Sbjct 33609 ATGTTGCCGCCGCTCATGACGAAGTGACTGGCGAACGTATGCCGCAGGACGTG 33557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104310375780268