Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq7343 311 8e-80 seq7149 219 4e-52 seq5761 147 2e-30 seq7010 141 8e-29 seq6955 141 8e-29 seq7453 116 3e-21 seq6233 116 3e-21 seq1586 116 3e-21 >seq7343 Length=933009 Score = 311 bits (344), Expect = 8e-80 Identities = 605/884 (68%), Gaps = 16/884 (2%) Strand=Plus/Plus Query 57540 TTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCA 57599 |||||||| || || ||| ||||||||||||| ||| | | |||||| || || ||||| Sbjct 374401 TTTGTCATCTTCCCCATTCAATATCCAGACATCTGGGAAAAGTACAAGAAAGCGGAAGCC 374460 Query 57600 TCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCT-GAGCGATTGGGATTCCCT 57658 |||||||||||| |||||||| ||||| ||| | || || || | ||||| || || Sbjct 374461 TCGTTTTGGACCACGGAAGAAGTGGACCTATCTCAAGACCTCGATC-ATTGGAATAAGCT 374519 Query 57659 --CAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGAT 57716 |||| ||| || || | || || || ||| |||| |||||||| ||||| ||| Sbjct 374520 GACAAACAAT--GAAAGGCACTTCATATCGCATGTGCTGGCCTTTTTCGCAGCATCTGAT 374577 Query 57717 GGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCG 57776 || ||||| ||||| ||| | || ||| |||| || ||||||||||| || ||||| Sbjct 374578 GGCATTGTGAACGAAAATCTTGTGGAACGATTCAGCCAGGAAGTGCAAGTAACCGAGGCT 374637 Query 57777 AGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTA 57836 ||||| || || || |||||| | ||||| ||||| | || || |||||||| | Sbjct 374638 AGATGTTTCTATGGGTTTCAAATAGCCATCGAAAATATTCACTCTGAAATGTACAGCATG 374697 Query 57837 CTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAA 57896 || || || || ||| | | || | ||||| || |||| ||||| || ||| Sbjct 374698 CTGATTGAGACCTACATCAGCGATCCTGTTCAGAAAAGTTTCTTGTTTAACGCAATTGAA 374757 Query 57897 ACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCC--- 57953 ||| | ||| | | ||| || || ||| | | || ||||| ||| || Sbjct 374758 ACACTTCCCTGTGTAAGGAGGAAAGCGGACTGGGCGCTTAAGTGGAT---CAGCTCCAAG 374814 Query 57954 ACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCG 58013 ||| |||| || | ||||| | |||| ||||| || |||||||| ||||| || || Sbjct 374815 ACGTCCACATTTGGAGAGAGAATCGTCGCTTTCGCAGCTGTCGAAGGAATATTTTTCTCT 374874 Query 58014 GGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTT 58073 ||||||||||| | || || ||| | |||||||||||| |||||||||||||||| ||| Sbjct 374875 GGCAGCTTTGCTTCGATCTTCTGGCTTAAGAAACGCGGCTTGATGCCCGGCCTGACATTT 374934 Query 58074 AGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTAC 58133 || || |||| || | ||||| || | ||| ||| ||||| || || | | | Sbjct 374935 TCAAATGAACTGATCTCCAGAGACGAAGGATTGCATTGTGACTTTGCCTGTTTACTATTC 374994 Query 58134 TCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTC 58193 || | | || | ||||| | || | | || |||||| || || || Sbjct 374995 TCCTATCTCGTTCAAAAACCCTCCAAAGAAAGAGTGACGGGCATTATTCGAGATGCAGTT 375054 Query 58194 GCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAAT 58253 | |||||| | |||||| | | || || || || || | |||| |||||| Sbjct 375055 GTTATCGAACAGGAGTTTCTGTCGGATGCACTGCCTGTTAGTCTTATCGGGATGAACTGC 375114 Query 58254 GATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT-GATTG- 58311 | | |||| ||||||| || ||||| || ||| |||| | | ||||| | ||| Sbjct 375115 AAGCTCATGTGCCAGTACATAGAATTTGTGGCTGACCGACTGCTAATGGAACTCGGTTGT 375174 Query 58312 GAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGG 58371 || | || ||| || | |||||||| ||||||||| | || || |||| Sbjct 375175 GAAAAGGT--TTATAATGTCACTAATCCGTTCGATTTTATGTCGATAATATCTACAGAGG 375232 Query 58372 GCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAA 58415 ||||||| |||||||||||||| || || ||||||| || ||| Sbjct 375233 GCAAGACCAACTTTTTCGAAAAGAAGGTCGGCGAATACCAGAAA 375276 >seq7149 Length=218332 Score = 219 bits (242), Expect = 4e-52 Identities = 398/572 (70%), Gaps = 13/572 (2%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 ||| || || || ||||| |||| || |||||||| ||||| | | ||||||||| || Sbjct 124036 CTTATCGACGGTGAACTGGATGGGATTGGCGGCCGGCTTGGTTCTCAAATAATACATTCC 123977 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 || ||||| ||| ||||||| ||||||| || ||||| | || || || || | Sbjct 123976 GGTTTTCAGGCCCTTCTTCCAACCGTAAAAGTGCATCGAGGACAGAACGCCGTAGCTGGC 123917 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 || |||| | || || || || || |||||||| || || ||||| ||||| Sbjct 123916 TTTTTCAATGTGGATGTTCAAACTTTGGCTTTGGTCGATAAATGCGCCGCGATCCGCGGC 123857 Query 22285 CATATTTATCAATGTACGCAT--CGACATTTCCCATACGGTCTTGTACAGTTGCCTG-AT 22341 ||||| | | || || | ||| |||||||| || |||||||| | |||||| | Sbjct 123856 CATATCGAGGA-TG-ACTTTTTGCGAAATTTCCCACACCGTCTTGTAGA-TTGCCTTCAA 123800 Query 22342 CTC-TAACGG-TATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTT 22399 || | | || | ||| ||| | || | || |||| |||| ||||| || Sbjct 123799 GTCATCAGGGATGTCGGG--GATGTTTTGTATCGAGCCGTGATTGGCTATGACTTGGTTC 123742 Query 22400 TTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACC 22459 || ||||| |||| ||||| || | ||||||| || |||| ||||| | || ||| Sbjct 123741 TTCATCGTGTCGTCCCACAGTCCTCTTTCGGTCAAGTCCTTGAGAAGATGCTGATTGACC 123682 Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519 ||||||||||| ||||||| ||| | || ||||||||| ||| |||| |||| Sbjct 123681 ACTTGAAACTCCCCGGACAGGACTCTCCGAGTGTAAATGTTACTAGTGTACGGCTCGACG 123622 Query 22520 GATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGC 22579 ||| || |||||||| || || ||||| ||||| || ||||| || |||| || | | Sbjct 123621 CTTTCGTTATTTCCCAGGATTTGGGCGGTTGAAGCCGTGGGCATTGGGGCCAGAAGCAAC 123562 Query 22580 GAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCG 22639 |||||||| | ||| || || | ||||| ||| | | || ||| ||||||||||| Sbjct 123561 GAGTTTCTTACGCCATGTTTGGCGATTTTCGCCTTTAACGCCGCCCAATCCCACAGATCT 123502 Query 22640 GACGGCGTCACATTGTCCCACATATCGTATTG 22671 | ||| | ||| |||||||| ||||| || Sbjct 123501 GTGGGCATGACA---TCCCACATGTCGTACTG 123473 Score = 150 bits (166), Expect = 2e-31 Identities = 320/477 (67%), Gaps = 5/477 (1%) Strand=Plus/Minus Query 22730 GCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTC 22789 || ||||||||||| | ||||| ||| || || || | || ||||| || ||||||| Sbjct 123361 GCCAGTTCGCAGCTGGTCTCCAGCGCCCCATAGTACAACGTTTCGAATATCCGCTTGTTC 123302 Query 22790 AATTCGGCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATA 22849 || || || | ||| ||| | ||||| ||||||| | ||| ||||| |||| Sbjct 123301 AAAAGGGTCGCATCAGGGCTATCGAAGGGCATTCGCATCAAAATGAAGGCGTCGGCCAGG 123242 Query 22850 CCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAA 22909 || || | || || || || || | || || ||||| ||||||||| | Sbjct 123241 CCTTGGATTCCAATCCCTATAGGCCTGTGCCGCATGTTCGAGTTCTTTGCCTCGATTACC 123182 Query 22910 GGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNN 22969 || || | ||| || || | ||| ||| || | || || | |||||| || Sbjct 123181 GGGTAAAAGTTCACGTCAATAATCTTGTCCAAATTCCGCGTGACTACTTTCGTGATGGCC 123122 Query 22970 NNNNNNNNNTCAAAGTCGTAAACGC--CCGATT-GTACA-ACAAACTTGTTGACGGCGAT 23025 || ||||| |||| | ||||| | | |||||| |||| || || | Sbjct 123121 TTTAACTTCTCGAAGTCA-AAACTCTTCCGATCAGCGGATACAAACATGTTAACCGCCAC 123063 Query 23026 CGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACA 23085 ||||| |||||||| ||||| | || || || ||||| || || ||||| || || Sbjct 123062 TGAGGCCAGATTGCAAACGGCGATTTCATCGGCTGAAGTGTATTCAACGATTTCCGTGCA 123003 Query 23086 TAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATC 23145 |||||||| | |||||||||||||| || |||||||| ||| || ||||| | || Sbjct 123002 AAGATTGCTGCTCTTTATCGTGCCCAGGTTCTTCTGGTTGGATTTGCGGTTGCAGGCGTC 122943 Query 23146 CTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCA 23202 ||||| |||||||| ||||| || || || || ||||| |||| | || ||||| Sbjct 122942 TTTGTACAGCATGTAGGGCGTCCCGGTTTCCACTTGCGAGGCGATAACAGCGCGCCA 122886 Score = 125 bits (138), Expect = 6e-24 Identities = 236/347 (68%), Gaps = 0/347 (0%) Strand=Plus/Minus Query 23593 ACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCAT 23652 |||||| |||| || ||||| || | | || ||||||||| | ||| || || | Sbjct 122321 ACCTTTCGCTCTAATATTGTGTACATTTATGCCGATGCCTCCGGCGCTTTTGGAAATAAA 122262 Query 23653 CGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAA 23712 || ||||| | || |||||||||||| |||||||| || || | || Sbjct 122261 GGCACATTGAGTAAGGCACGTGTAGATGCCCTCAATGCTGTCATCGGGCATCATCAGCAG 122202 Query 23713 GAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTG 23772 ||| || || || | ||| | | ||||||| ||||| |||||| || || |||||||| Sbjct 122201 GAAGCAGGAGGATAGTTGAGGTCTGGGCGTGGCGGCGTTGAACAGAGTGGGACTGGCGTG 122142 Query 23773 CGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCC 23832 ||| ||| | | ||||| | ||||| || ||||| || | |||||| || ||||| Sbjct 122141 CGTGAAGAACTTCTCTGACATGAAGTTGTAGGTTTCGATTGCTGAATCAATATCTTCTCC 122082 Query 23833 GTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTT 23892 || || || | | ||| | ||||| ||||| || || || || || | ||||| Sbjct 122081 ATGGATGCCCACTGAGACCCTCATCAACATGTGCTGCGGCCTTTCAACAATCTTTCCGTT 122022 Query 23893 AATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGT 23939 || || | ||||| || | | || ||||| |||||||| |||| Sbjct 122021 GATCTTCAGAAGATACGACCTCTCCAGGGTTTTGAATCCAAAGTAGT 121975 Score = 98.7 bits (108), Expect = 9e-16 Identities = 110/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 23423 TTTTTC--AAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAA 23480 |||||| | || |||||| || ||||| || |||||||| || || | ||||| ||||| Sbjct 122555 TTTTTCGGAGATTCAAAAAATCGAACACATCAGCATGCCAGGGTTCCAAGTAAATGGCAA 122496 Query 23481 ACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTC 23540 | || || || | |||||| ||||| || || || || ||| || ||||| |||| Sbjct 122495 AAGCCCCAGGCCGCTTATTTCCGCCTTGGTCCACATATTTGGCTGTACTGTTGAACACCT 122436 Query 23541 TTAGCATCGGCACGAGACCGTTGGAC 23566 | ||||||||||| | ||||||||| Sbjct 122435 TCAGCATCGGCACCAAGCCGTTGGAC 122410 >seq5761 Length=8615 Score = 147 bits (162), Expect = 2e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || ||||| || || || || |||||| | || || || || || Sbjct 99 ATGCAAATTTTCGTGAAAACTCTCACTGGTAAGACCATCACCCTTGAGGTCGAGCCATCA 158 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||||| || ||| || ||| ||||||||||||| | || ||||| ||| Sbjct 159 GACACCATCGAAAATGTAAAAGCGAAAATTCAGGACAAGGAAGGCATACCTCCCGATCAG 218 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||| | || |||||||| || ||||||||||| | | | || | ||| || || Sbjct 219 CAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAAGA-TGGACGTACCCTATCCGACTACAA 277 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || ||||| || |||||| |||| || ||| |||| || |||| Sbjct 278 CATCCAGAAGGAATCCACCCTTCATTTGGTGCTCAGATTGAGAGGAGGTA 327 >seq7010 Length=35453 Score = 141 bits (156), Expect = 8e-29 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || ||||| || || || || |||||| | || || || || || Sbjct 8906 ATGCAAATTTTCGTGAAAACTCTCACTGGTAAGACCATCACCCTTGAGGTCGAGCCATCA 8847 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||||| || ||| || ||| ||||||||||||| | || ||||| ||| Sbjct 8846 GACACCATCGAAAATGTAAAAGCGAAAATTCAGGACAAGGAAGGCATACCTCCCGATCAG 8787 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||| | || |||||||| || ||||||||||| | | | || | ||| || || Sbjct 8786 CAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAAGA-TGGACGTACCCTATCCGACTACAA 8728 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || ||||| || ||||| |||| || ||| |||| || |||| Sbjct 8727 CATCCAGAAGGAATCCACCCTTCACTTGGTGCTCAGATTGAGAGGAGGTA 8678 >seq6955 Length=469295 Score = 141 bits (156), Expect = 8e-29 Identities = 172/230 (75%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||| |||| |||||||| ||||| | || |||||||| || Sbjct 94412 ATGCAGATTTTCGTGAAGACTTTGACTGGCAAAACTATCACACTTGAGGTTGAACCATCA 94471 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || |||| | || | ||| | | |||||||||| | || || ||||| Sbjct 94472 GACACTATTGAGAACGTTAAAGCCAAGATTCAAG-ACAAGGAAGGAATTCCCCCAGACCA 94530 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA--CTCTATGACTATGAGCGATTAT 31369 || || | || ||||||||||||||||||||||| | |||| | |||||| Sbjct 94531 ACAACGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGCCGCACCCTATCA--GATTAT 94588 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| ||||||||||| ||||| ||| |||| | ||| |||| || || Sbjct 94589 AACATCCAAAAAGAATCCACTCTGCATTTGGTGTTGAGATTGAGAGGTGG 94638 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || ||||| || ||||| ||||| | || || ||||| || Sbjct 95552 ATGCAAATTTTCGTGAAAACCCTGACTGGAAAAACTATCACTTTGGAAGTGGAACCCTCA 95611 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || ||| | || |||||| |||||| | || || |||||| Sbjct 95612 GACACCATCGAGAATGTTAAAGCTAAGATCCAGGACAAAGAAGGCATTCCTCCAGACCAG 95671 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || ||||| |||||||| ||||||||| ||| | ||||| ||| Sbjct 95672 CAGAGGTTGATTTTCGCAGGCAAACAATTGGAAGACGGCCGCACTTTATCGGATTACAAC 95731 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || ||||| |||||||| |||| || || |||| || || Sbjct 95732 ATACAGAAGGAATCCACTCTTCACTTGGTGCTCAGGTTGAGAGGAGG 95778 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| ||||| || || || |||||||| || || | || || ||||| || Sbjct 94640 ATGCAAATTTTTGTAAAAACCCTTACTGGCAAAACAATTACACTTGAAGTCGAACCATCT 94699 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| || ||| | || |||||||||||| | || || ||||| Sbjct 94700 GATACCATTGAAAATGTTAAAGCCAAGATTCAGGACAAGGAAGGAATTCCTCCAGACCAA 94759 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 ||| | |||| || || ||||||||||| ||||| | | | || || || || || Sbjct 94760 CAGAGGTTAATTTTTGCCGGCAAACAGTTAGAAGA-TGGACGTACATTGTCTGACTACAA 94818 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || |||||||| ||| | ||| |||| | |||||||| || || Sbjct 94819 CATCCAGAAAGAATCCACTTTACATTTGGTTTTGAGACTGAGAGGAGG 94866 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || || ||||| || ||||| ||||| | || || ||| | || Sbjct 95324 ATGCAAATCTTTGTTAAAACCCTGACTGGAAAAACCATCACTTTGGAAGTGGAAGCCTCA 95383 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||||| || ||| | || |||||||||||| | || || |||||| Sbjct 95384 GATACCATCGAAAACGTTAAAGCTAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 95443 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||| || |||||||| || || | ||| || ||| Sbjct 95444 CAGCGTCTCATCTTTGCTGGAAAGCAGTTGGAGGATGGCCGCACACTTTCCGACTACAAC 95503 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || ||||| ||||| || ||||| |||| || || ||||| || || Sbjct 95504 ATCCAAAAGGAATCCACCCTTCACTTGGTGCTCAGGCTGAGAGGAGG 95550 Score = 107 bits (118), Expect = 2e-18 Identities = 147/201 (73%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || || |||||||| |||||||| || || | || || ||||| || Sbjct 95780 ATGCAGATTTTTGTTAAAACTCTGACTGGCAAAACTATTACACTTGAAGTCGAACCATCT 95839 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||||| || || || ||| | |||||||||||| | || || ||||| Sbjct 95840 GATACCATCGAAAATGTTAAGGCAAAGA-TCCAGGACAAGGAAGGAATTCCTCCAGACCA 95898 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA--CTCTATGACTATGAGCGATTAT 31369 ||| | || || ||||| |||||||| |||||||| | |||| | |||||| Sbjct 95899 ACAGAGACTGATTTTCGCAGGCAAACAATTGGAAGATGGCCGCACCCTATCA--GATTAT 95956 Query 31370 AACATTCAAAAAGAATCGACT 31390 ||||| ||||||||||| ||| Sbjct 95957 AACATCCAAAAAGAATCCACT 95977 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || || ||||| || || ||||| || || | || || || || || Sbjct 95096 ATGCAAATTTTTGTCAAAACTCTTACTGGAAAAACCATTACACTTGAAGTCGAGCCTTCT 95155 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | |||| || ||| | || |||||| ||||| | || || ||||| Sbjct 95156 GATACTATTGAAAATGTTAAAGCCAAGATCCAGGACAAAGAAGGAATTCCCCCAGACCAA 95215 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||| || ||||| ||||||||| ||| || ||||| ||| Sbjct 95216 CAGAGACTGATTTTCGCAGGAAAACAATTGGAAGACGGCCGAACTTTGTCTGATTACAAC 95275 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || ||||| |||||||| |||| || || |||| || || Sbjct 95276 ATCCAGAAGGAATCCACTCTTCACTTGGTGCTCAGGTTGAGAGGTGG 95322 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || | || || ||||| ||||| | || || ||||| || Sbjct 94184 ATGCAGATCTTCGTGAAAACATTAACTGGAAAAACCATCACTTTGGAAGTGGAACCTTCA 94243 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | ||| |||||| ||||| | || || |||||| Sbjct 94244 GACACAATCGAGAATGTTAAGGCTAAAATCCAGGACAAAGAAGGAATCCCCCCAGACCAG 94303 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || |||||||| || || |||||||| | | | ||| | ||| || || Sbjct 94304 CAGCGTCTCATTTTCGCTGGAAAGCAATTGGAAGA-TGGACGCACTCTTTCCGACTACAA 94362 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || ||||| || |||||||| |||| | | ||||| || || Sbjct 94363 CATCCAGAAAGAGTCTACTCTTCACTTGGTTTTGCGGCTGAGAGGAGG 94410 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| || ||| | || ||||||||||| || | || || ||||| || Sbjct 94868 ATGCAAATCTTCGTGAAAACTTTAACCGGCAAAACGATTACTTTGGAAGTGGAACCCTCA 94927 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || || || |||||||||||| | || || |||||| Sbjct 94928 GACACAATTGAGAACGTTAAGGCGAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 94987 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 ||| | | || || || || || |||||||| || | | | ||| | || || || Sbjct 94988 CAGAGATTGATCTTTGCAGGAAAGCAGTTGGAGGA-TGGACGCACTTTATCTGACTACAA 95046 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||||||| || || ||| | ||| |||| | ||| ||||||| || Sbjct 95047 CATTCAAAAGGAGTCCACTTTGCATTTGGTGTTGAGATTGAGGGGAGG 95094 >seq7453 Length=213858 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||||||||| ||||| || ||||| | || || || || || Sbjct 107890 ATGCAGATCTTCGTGAAGACTCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCATCA 107831 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||||| || ||| | ||| ||| || || ||| | || ||||||||| Sbjct 107830 GATACTATCGAAAATGTTAAAGCCAAAATCCAGGATAAAGAGGGCATCCCTCCCGACCAG 107771 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 ||||| || || ||||| ||||| ||| ||||||| | | | ||| || || || || Sbjct 107770 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGA-TGGACGCACTTTGTCGGACTACAA 107712 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || || ||| | ||| |||| | || ||||||| || Sbjct 107711 CATCCAGAAGGAGTCCACTTTGCATTTGGTGTTGAGGTTGAGGGGAGG 107664 >seq6233 Length=1575 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||||||||| || || || ||||| | || || || || || Sbjct 414 ATGCAGATCTTCGTGAAGACTCTGACGGGGAAGACCATCACTCTTGAGGTCGAGCCATCA 473 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||||| || ||| | ||| |||||| || ||| | || ||||||||| Sbjct 474 GATACCATCGAAAATGTTAAAGCCAAAATCCAGGACAAAGAGGGCATCCCTCCCGACCAG 533 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 ||||| || || ||||| ||||| ||| ||||||| | | | ||| || || ||||| Sbjct 534 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGA-TGGACGCACTTTGTCGGACTATAA 592 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || || ||| | ||| |||| | || ||||||| || Sbjct 593 CATCCAGAAGGAGTCCACTTTGCATTTGGTGTTGAGGTTGAGGGGAGG 640 >seq1586 Length=2413 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||||||||| || || || ||||| | || || || || || Sbjct 1852 ATGCAGATCTTCGTGAAGACTCTGACGGGGAAGACCATCACTCTTGAGGTCGAGCCATCA 1911 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||||| || ||| | ||| |||||| || ||| | || ||||||||| Sbjct 1912 GATACCATCGAAAATGTTAAAGCCAAAATCCAGGACAAAGAGGGCATCCCTCCCGACCAG 1971 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 ||||| || || ||||| ||||| ||| ||||||| | | | ||| || || ||||| Sbjct 1972 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGA-TGGACGCACTTTGTCGGACTATAA 2030 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || || ||| | ||| |||| | || ||||||| || Sbjct 2031 CATCCAGAAGGAGTCCACTTTGCATTTGGTGTTGAGGTTGAGGGGAGG 2078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445720775808960