Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_004629.1 Length=280334 Score E Sequences producing significant alignments: (Bits) Value seq1760 104 4e-17 >seq1760 Length=1669 Score = 104 bits (114), Expect = 4e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 272868 TATATGGTGGGCCCAGCAGGACTTGAACCTGCGACCAAGCGATTATGAGTCGCCTGCTCT 272927 |||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||| Sbjct 669 TATATGGTGGGCCCAGACAGACTTGAACTGTCGACCAACGGATTATGAGTCCGCTGCTCT 610 Query 272928 AACCAACTGAGCTATAGGCCCT 272949 |||||||||||||||||||||| Sbjct 609 AACCAACTGAGCTATAGGCCCT 588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 896848998109120