Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq7453 118 1e-21 seq6955 113 4e-20 seq6233 113 4e-20 seq5761 113 4e-20 seq1586 113 4e-20 seq7010 107 2e-18 seq7149 100 3e-16 seq7343 98.7 9e-16 >seq7453 Length=213858 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | ||| | || ||| ||||| | || |||||||| || |||||||| || Sbjct 107663 GCCTCCCCTCAACCTCAACACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCCGA 107722 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| || || ||||||||||| ||| |||| | ||||||||||| ||||| Sbjct 107723 CAAAGTGCGTCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCGGGAGG 107782 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185 ||| || ||||| || |||||| |||| | | | || | |||||| | | ||||| Sbjct 107783 GATGCCCTCTTTATCCTGGATTTT-GGCTTTAACATTTTCGATAGTATCTGATGGCTCGA 107841 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || ||||| || ||||| |||||||| Sbjct 107842 CCTCAAGAGTGATGGTCTTGCCCGTCAGAGTCTTCACGAAGATCTGCAT 107890 >seq6955 Length=469295 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | ||| | || ||| ||||| | || |||||||||||||||||||| || Sbjct 95094 CCTCCCCTCAATCTCAACACCAAATGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGAT 95035 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| | |||||| ||||| |||| || | ||||||||| || || Sbjct 95034 AAAGTGCGTCCATCCTCCAACTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGA 94975 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| ||| ||| | | ||| | || || | || || | Sbjct 94974 ATGCCTTCCTTGTCTTGGATCTTCGCCTTAACGTTCTCAATTGTGTCTGAGGGTTCCACT 94915 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||||| ||||||| |||||| ||||| || ||||| Sbjct 94914 TCCAAAGTAATCGTTTTGCCGGTTAAAGTTTTCACGAAGATTTGCAT 94868 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | ||||| || || | || || ||||| || ||||||||||| | Sbjct 95322 CCACCTCTCAACCTGAGCACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGAC 95263 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || | || || |||||| | || | | ||| ||||| || || Sbjct 95262 AAAGTTCGGCCGTCTTCCAATTGTTTTCCTGCGAAAATCAGTCTCTGTTGGTCTGGGGGA 95203 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||||||||| ||| || |||| | | | || | |||||| | | ||||| Sbjct 95202 ATTCCTTCTTTGTCCTGGATCTT-GGCTTTAACATTTTCAATAGTATCAGAAGGCTCGAC 95144 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| |||||| || || |||||||| || ||||| ||||| Sbjct 95143 TTCAAGTGTAATGGTTTTTCCAGTAAGAGTTTTGACAAAAATTTGCAT 95096 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 ||||| || || | ||| || |||||||| |||||||| ||| | ||||| ||| Sbjct 95535 AGCACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCGGAAAGTGTGCGGCCATCC 95476 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || | |||||| || || |||| | |||||||||||| || ||||| ||||| ||||| Sbjct 95475 TCCAACTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCTTCCTTGTCT 95416 Query 131143 GTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 ||| || |||| | | | || | ||||| | || || | || | || | ||| Sbjct 95415 TGGATCTT-AGCTTTAACGTTTTCGATGGTATCTGAGGCTTCCACTTCCAAAGTGATGGT 95357 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||| || || || ||||| || || || ||||| Sbjct 95356 TTTTCCAGTCAGGGTTTTAACAAAGATTTGCAT 95324 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 |||| || || || | || ||||| || || |||||||| ||| | ||||| Sbjct 94398 CGCAAAACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCA 94339 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 || || | ||||| || ||| | || | |||||||||||| || ||||||||||||||| Sbjct 94338 TCTTCCAATTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCTGGGGGGATTCCTTCTTTG 94279 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || |||||| ||| | | ||| | || || | | || | || | || | | Sbjct 94278 TCCTGGATTTTAGCCTTAACATTCTCGATTGTGTCTGAAGGTTCCACTTCCAAAGTGATG 94219 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||| || |||| ||||| ||||| |||||||| Sbjct 94218 GTTTTTCCAGTTAATGTTTTCACGAAGATCTGCAT 94184 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 ||||| || || | || || ||||| || ||||||||||| | ||||| ||| Sbjct 95763 AGCACCAAGTGAAGAGTGGATTCCTTCTGTATGTTGTAATCCGATAAAGTGCGGCCGTCT 95704 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || | || ||||||||| | || || | ||||||||| ||||| || ||||||||||| Sbjct 95703 TCCAATTGTTTGCCTGCGAAAATCAACCTCTGCTGGTCTGGAGGAATGCCTTCTTTGTCC 95644 Query 131143 GTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 ||| || |||| | | | ||| | || || | || || | || | || | || Sbjct 95643 TGGATCTT-AGCTTTAACATTCTCGATGGTGTCTGAGGGTTCCACTTCCAAAGTGATAGT 95585 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||| || || || ||||| |||||||| ||||| Sbjct 95584 TTTTCCAGTCAGGGTTTTCACGAAAATTTGCAT 95552 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || ||| ||||| | || || || ||||| ||||| ||||| Sbjct 94638 CCACCTCTCAATCTCAACACCAAATGCAGAGTGGATTCTTTTTGGATGTTATAATCTGAT 94579 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || | ||| ||||| ||| | || || || || ||||| || || Sbjct 94578 AGGGTGCGGCCATCTTCCAACTGTTTGCCAGCGAAAATCAATCGTTGTTGGTCTGGGGGA 94519 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||| | | |||| | | | ||| | ||| || | | || | Sbjct 94518 ATTCCTTCCTTGTCT-TGAATCTTGGCTTTAACGTTCTCAATAGTGTCTGATGGTTCAAC 94460 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||||| || || | ||| || |||||||||||||| Sbjct 94459 CTCAAGTGTGATAGTTTTGCCAGTCAAAGTCTTCACGAAAATCTGCAT 94412 >seq6233 Length=1575 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | ||| | || ||| ||||| | || |||||||| || ||||| || || Sbjct 641 GCCTCCCCTCAACCTCAACACCAAATGCAAAGTGGACTCCTTCTGGATGTTATAGTCCGA 582 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| || || ||||||||||| ||| |||| | ||||||||||| ||||| Sbjct 581 CAAAGTGCGTCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCGGGAGG 522 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185 ||| || |||||||| |||||| |||| | | | || | ||||| | | ||||| Sbjct 521 GATGCCCTCTTTGTCCTGGATTTT-GGCTTTAACATTTTCGATGGTATCTGATGGCTCGA 463 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || ||||| || ||||| |||||||| Sbjct 462 CCTCAAGAGTGATGGTCTTCCCCGTCAGAGTCTTCACGAAGATCTGCAT 414 >seq5761 Length=8615 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 ||||| ||||| | ||| || ||||| || |||||||| ||| | ||| || || Sbjct 310 AGCACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTACGTCCATCT 251 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || | |||||| || ||| |||| ||||||||||| || ||||| || ||||| ||||| Sbjct 250 TCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGATCGGGAGGTATGCCTTCCTTGTCC 191 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 |||||| || | | || | || || | | ||||| || | ||| | ||| Sbjct 190 TGAATTTTCGCTTTTACATTTTCGATGGTGTCTGATGGCTCGACCTCAAGGGTGATGGTC 131 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||| || |||||||| |||||||| ||||| Sbjct 130 TTACCAGTGAGAGTTTTCACGAAAATTTGCAT 99 >seq1586 Length=2413 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | ||| | || ||| ||||| | || |||||||| || ||||| || || Sbjct 2079 GCCTCCCCTCAACCTCAACACCAAATGCAAAGTGGACTCCTTCTGGATGTTATAGTCCGA 2020 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| || || ||||||||||| ||| |||| | ||||||||||| ||||| Sbjct 2019 CAAAGTGCGTCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCGGGAGG 1960 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185 ||| || |||||||| |||||| |||| | | | || | ||||| | | ||||| Sbjct 1959 GATGCCCTCTTTGTCCTGGATTTT-GGCTTTAACATTTTCGATGGTATCTGATGGCTCGA 1901 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || ||||| || ||||| |||||||| Sbjct 1900 CCTCAAGAGTGATGGTCTTCCCCGTCAGAGTCTTCACGAAGATCTGCAT 1852 >seq7010 Length=35453 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 ||||| || || | ||| || ||||| || |||||||| ||| | ||| || || Sbjct 8695 AGCACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTACGTCCATCT 8754 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || | |||||| || ||| |||| ||||||||||| || ||||| || ||||| ||||| Sbjct 8755 TCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGATCGGGAGGTATGCCTTCCTTGTCC 8814 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 |||||| || | | || | || || | | ||||| || | ||| | ||| Sbjct 8815 TGAATTTTCGCTTTTACATTTTCGATGGTGTCTGATGGCTCGACCTCAAGGGTGATGGTC 8874 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||| || |||||||| |||||||| ||||| Sbjct 8875 TTACCAGTGAGAGTTTTCACGAAAATTTGCAT 8906 >seq7149 Length=218332 Score = 100 bits (110), Expect = 3e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 145843 CTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCC 145902 ||||||||| || ||| ||||||| || || || |||||||| |||||||| || Sbjct 122792 CTCTTCTTCATACTTCTCATAGAGCTTTTCGAATTCGTCCCCGTAGCATTCGGACAGTCC 122733 Query 145903 GGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAA 145962 ||| | | | ||| |||||||||||||| || || |||| | || |||| ||| || Sbjct 122732 GGGCGATTGATGGGGGCACATCAGCGACCAAACCCCATTGGACTGCACTCGCTTCATGAA 122673 Query 145963 CAAATCTGGCACCCACAGCGCGTACATCAAGTC 145995 ||||| |||||||||| ||||| | ||| || Sbjct 122672 TAAATCGGGCACCCACAAGGCGTAGAACAAATC 122640 Score = 86.0 bits (94), Expect = 6e-12 Identities = 489/790 (62%), Gaps = 59/790 (7%) Strand=Plus/Minus Query 145054 CTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAA 145113 ||||||||| || |||||||| |||| || || | || || | |||| ||| | Sbjct 123691 CTGATTGACCACTTGAAACTCCCCGGACAGGACTCTCCGAGTGTAAATGTTACTAGTGTA 123632 Query 145114 GGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGC 145173 || || | |||||||| ||||||||||| ||||| | || |||||||| || Sbjct 123631 CGGCTCGACGCTTTCGTTATTTCCCAGGATTTGGGCGGTTGAAGCCGTGGGCATTGGGGC 123572 Query 145174 CACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATC 145233 || | || || || | | ||| || || ||| | |||||| || ||||||| Sbjct 123571 CAGAAGCAACGAGTTTCTTACGCCATGTTTGGCGATTTTCGCCTTTAACGCCGCCCAATC 123512 Query 145234 CCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCC----CTCGCTGG 145289 ||| || || ||| | || ||||||||||||||||| | || || ||| |||| Sbjct 123511 CCACAGATCTGTGGGCATGACATCCCACATGTCGTACTGGAGGATTCCTTGACTCACTGG 123452 Query 145290 CGGGGCTGC-----------------CTTGA-------------AAGGAA--CTGTAACT 145317 || |||| |||| || ||| || | || Sbjct 123451 CGAACCTGCAAATAAGTTTTTTTTAGTTTGAGTTGATCGGGGACAATGAAGTCTTCACCT 123392 Query 145318 ---------------GCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAGAGCGCCG 145360 | ||| || | | || || ||||| || | |||||| || || Sbjct 123391 TGATAAGTAGAGTAGGTCCCCAGCTCCTCAGCCAGTTCGCAGCTGGTCTCCAGCGCCCCA 123332 Query 145361 AAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTACGGC 145420 | || | || ||| || || |||| | || |||| ||| ||| ||| | ||| Sbjct 123331 TAGTACAACGTTTCGAATATCCGCTTGTTCAAAAGGGTCGCATCAGGGCTATCGAAGGGC 123272 Query 145421 ATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGATGT 145480 || |||| || | || || ||||| || || || ||||| | || || |||| || Sbjct 123271 ATTCGCATCAAAATGAAGGCGTCGGCCAGGCCTTGGATTCCAATCCCTATAGGCCTGTGC 123212 Query 145481 TTCATGTTGCTCATCCTCGCCGACTCGAT---AGGATATCGATTACGGTCGATAATTTTA 145537 |||||| || | || |||||| || || || ||| ||||| || Sbjct 123211 CGCATGTTCGAGTTCTTTGC---CTCGATTACCGGGTAAAAGTTCACGTCAATAATCTTG 123155 Query 145538 TTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGAGCC 145597 | ||| || ||| ||||| || || ||| | ||||| || |||||||| | | Sbjct 123154 TCCAAATTCCGCGTGACTACTTTCGTGATGGCCTTTAACTTCTCGAAGTCAAAACTCTTC 123095 Query 145598 TCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCTCC 145657 ||| || ||| | | || || || | || |||| ||| ||||| || | || Sbjct 123094 CGATCAGCGGATACAAACATGTTAACCGCCACTGAGGCCAGATTGCAAACGGCGATTTCA 123035 Query 145658 TCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGA 145717 ||||| |||||| ||||| || | ||| | |||||| | || || || ||||| Sbjct 123034 TCGGCTGAAGTGTATTCAACGATTTCCGTGCAAAGATTGCTGCTCTTTATCGTGCCCAGG 122975 Query 145718 TTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTC 145777 || | ||| || ||| | |||||| ||||| ||||| |||||||| || || || Sbjct 122974 TTCTTCTGGTTGGATTTGCGGTTGCAGGCGTCTTTGTACAGCATGTAGGGCGTCCCGGTT 122915 Query 145778 TCCACCTGCG 145787 ||||| |||| Sbjct 122914 TCCACTTGCG 122905 >seq7343 Length=933009 Score = 98.7 bits (108), Expect = 9e-16 Identities = 332/504 (66%), Gaps = 21/504 (4%) Strand=Plus/Plus Query 46101 GAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTAT 46160 |||| | ||||||||| | |||||||||| | || || | || || | ||| | || Sbjct 374778 GAAAGCGGACTGGGCGCTTAAGTGGATCAGCTCCAAGACGTCCACATTTGGAGAGAGAAT 374837 Query 46161 GGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTA 46220 || || || || ||| || || | ||||| |||||||| ||||| | ||||| | Sbjct 374838 CGTCGCTTTCGCAGCTGTCGAAGGAATATTTTTCTCTGGCAGCTTTGCTTCGATCTTCTG 374897 Query 46221 CATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGA 46280 | || | ||| | |||||||||||||| ||| || || ||||| || | || Sbjct 374898 GCTTAAGAAACGCGGCTTGATGCCCGGCCTGACATTTTCAAATGAACTGATCTCCAGAGA 374957 Query 46281 CGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACACTCGCGTGCACGACAAGC 46339 ||| || ||||| |||||||| ||| | ||| | | | || ||| || | || | Sbjct 374958 CGAAGGATTGCATTGTGACTTTGCCTGTTTACTATTCT-CCTATCTCGTTCA--AAAACC 375014 Query 46340 TTGCGCCCGACACCGTGCTGAGCA-TGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTT 46398 | | || | ||| | ||| | ||| | || || || | || || |||||||| Sbjct 375015 CT-CCAAAGAAAGAGTGACGGGCATTATTCGA-GATGCAGTTGTTATCGAACAGGAGTTT 375072 Query 46399 TTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAAC-GCACAGTCAATGTGCGACTA 46457 | ||| |||||||| | | || | || |||||| ||| || |||||| | || Sbjct 375073 CTGTCGGATGCACTGCCTGTTAGTCTTATCGGGATGAACTGCA-AGCTCATGTGCCAGTA 375131 Query 46458 CATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCG----AAGCATTTTC 46513 ||| || ||||| || ||||||||||| || | || | | | ||| || | Sbjct 375132 CATAGAATTTGTGGCTGACCGACTGCTAATGGAACT----CGGTTGTGAAAAGGTTTATA 375187 Query 46514 ACGCGCGCAATCCATTTGAGTTTATG--AACAACATCTCCCTGGAGGGCAAAACTAATTT 46571 | | ||||| || || |||||| | || |||| | |||||||| || || || Sbjct 375188 ATGTCACTAATCCGTTCGATTTTATGTCGATAATATCTAC--AGAGGGCAAGACCAACTT 375245 Query 46572 TTTCGAAAAGCGCGTCGGCGAGTA 46595 |||||||||| |||||||| || Sbjct 375246 TTTCGAAAAGAAGGTCGGCGAATA 375269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471964489489920