Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq7015 91.5 2e-13 >seq7015 Length=178321 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/209 (71%), Gaps = 12/209 (6%) Strand=Plus/Minus Query 38445 TGGCCCAAGAGCATGAAGCAGACGCCGCAACAGTTGGCCGAGGCCGGCTTCTACTATTCG 38504 ||||| ||||||||||| ||||| || ||| |||||||||| || || || |||||| Sbjct 2914 TGGCCAAAGAGCATGAAACAGACCCCCCAAGAGTTGGCCGACGCTGGATTTTACTATCTC 2855 Query 38505 GGCACCGGAGACCAGGTCAAATG--TTTCTTT---TGCGGCGGCGGCCTTAAGGACTGGG 38559 ||||| || || ||||| | || |||| || || |||||| | || ||||||| Sbjct 2854 GGCACTGGGGA-----TCAAACGATTTGCTTTCACTGTGGTGGCGGCTTGAAAGACTGGG 2800 Query 38560 AGCCTGCGGACGATCCGTGGGCGCAGCACGCGCGCTGGTTCGACAGGTGCGCTTACGTGC 38619 | | ||| || |||| ||||||||| | |||||| || ||| | |||||| Sbjct 2799 AACAGAACGACAGCCCTTGGGAGCAGCACGCCCTTTGGTTCCCCAAGTGTTCCTACGTG- 2741 Query 38620 TCACCG-TCAAAGGCGCCGACTACGTTCA 38647 | | | | ||||| |||| ||| |||| Sbjct 2740 TATCTGATGAAAGGGCCCGAATACATTCA 2712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537548176312480