Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq7475 91.5 1e-13 >seq7475 Length=156416 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 108844 AACATTTTCCCAAGAGAAAACAAATTGGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCAC 108903 |||||| || | |||||| || || ||||| || |||| | || || || ||||| Sbjct 96601 AACATTAAACCGACAGAAAATAAGTTTGTGGCTGCTGTGGCCTTTGGAGAAGGCTGGCAT 96660 Query 108904 AACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTGGGGAA 108953 ||||||||||| |||||||| | ||||||||||| |||||| ||||||| Sbjct 96661 AACTACCACCATGTGTTCCCTTGGGACTACAAGGCAGCCGAGCTGGGGAA 96710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381734702415072