Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq7319 194 7e-44 seq6955 156 2e-32 seq7641 109 2e-18 seq7609 89.7 2e-12 seq6657 89.7 2e-12 seq6348 89.7 2e-12 >seq7319 Length=1095930 Score = 194 bits (214), Expect = 7e-44 Identities = 1023/1609 (64%), Gaps = 56/1609 (3%) Strand=Plus/Plus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||| | || |||||| | || ||||| | ||| ||||| ||||| | ||| ||||||| Sbjct 889389 GCAGTGGGTATTGATTTGGGTACCACATATTCGTGTGTTGGTGTCTGGCAACATGGAAAA 889448 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACG 451033 || ||||| || || || ||||||||| || || || || | || |||||| Sbjct 889449 GTGGAAATCATCGCCAACGACCAAGGAAACCGCACAACCCCCAGTTATGTTGCTTTTACA 889508 Query 451034 GATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCAAA-A 451091 || | || | || | || | || || || | | | | | | || ||| | Sbjct 889509 GACACCGAGCGTCTACTTGGAGACGCCGCAAAGAACCAAGTTGCCATGAAC--CCATCTA 889566 Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAA 451151 |||| || | || || ||||| ||||||| || | | |||||| | | ||| Sbjct 889567 ACACTGTCTTCGACGCAAAACGACTAATTGGACGCAAATTCGATGATCCCAAGATCCAAC 889626 Query 451152 AAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAG 451211 |||| | ||| | | | | | || || || | | ||||| || | | |||| Sbjct 889627 AAGATATCAAACATTGGCCGTTTAAAGTCGTCAACGACCATGGAAAACCAAAACTCCAAG 889686 Query 451212 TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTA 451271 | | | || || ||||||||||| || || ||||||||||| || |||||| | | Sbjct 889687 TCGAACACAAGGGCGAAACTAAAACGTTCGCACCTGAAGAAATCAGCTCCATGGTTTTAA 889746 Query 451272 CTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTA 451331 | |||||||| ||||| ||||| ||| |||| | | || | ||||| || ||| Sbjct 889747 CGAAAATGAAGGAAACTGCAGAGGCGTATCTTGGAACAACTGTAAAAGATGCTGTTGTTA 889806 Query 451332 CTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTG 451391 | ||||| || || ||||| ||| | ||| ||||||| |||||||| || ||| |||| Sbjct 889807 CCGTTCCAGCCTACTTCAACGATTCCCAAAGGCAAGCCACTAAAGACGCTGGAGTGATTG 889866 Query 451392 CTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGAC 451451 ||||| ||||||| | |||||||||| |||||||| |||||||| || || ||||| | Sbjct 889867 CTGGTCTAAATGTAATGAGAATTATTAACGAACCTACCGCAGCTGCCCTTGCTTATGGCC 889926 Query 451452 T--AGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGG 451509 | | | |||| |||| | ||||| || | | | || ||| |||| || || Sbjct 889927 TGGACAAGAATCTAAAG-----GGCGAAAAGAACGTCCTGATTTTCGATCTTGGAGGCGG 889981 Query 451510 AACTCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGAAGTAAAGGCAAC 451566 |||| ||| || | || | ||||| || || |||| || ||||| | || Sbjct 889982 AACTTTCGATGTGTCCATCCTAACTATTGATGAAGGTTCACTATTCGAGGTAAAATCGAC 890041 Query 451567 CAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAATGGTTGAA 451626 || || || ||||| ||||||||||| | || || | || | || Sbjct 890042 GGCAGGCGACACCCATCTTGGAGGTGAAGACTTCGACAACCGTCTAGTCAATCACTTCGC 890101 Query 451627 AACTGATGTTCAACGAAAACTAAAAGTAGATATTTCTACTAACCAAAAAGCACTTAGACG 451686 ||| || ||||| | ||| ||| | | |||| || |||| ||||| | Sbjct 890102 CGATGAATTTTTGAGAAAATTCAAAAAAGACCTCCGCAGCAACCCAAGAGCAATTAGAAG 890161 Query 451687 TCTTAAAACATCAGCAGAAAAAGCTAAAATTACACTCAGTTCAACACAAACTA--CTAGT 451744 | | |||| |||| || || |||| | ||| || | || | | | | | | Sbjct 890162 ATTGAGAACAGCAGCTGAGCGGGC-AAAACGA-ACTTTGTCCTCCAGCACCGAAGCCACT 890219 Query 451745 ATAAACATTGATAGTTTAGTTGATGGAATGGA-TTATGCTACTACTCTTACCCGTGCTAA 451803 | | |||||| | || | || || |||| || | | |||| | |||| || | Sbjct 890220 CTGGAAATTGATGCTCTATTCGAAGGGGTGGACTTCTAC-ACTAAAATCTCCCGAGCCAG 890278 Query 451804 ATTTGAATCAATTTGTTCCAGTATTTTTGCACGGGTA--ATGAAACCTGTTGATCAAGTA 451861 ||| ||| | | |||| || | | || || | | | || ||||| | | | Sbjct 890279 ATTCGAAGAATTGAATTCC--GATCTGTTCAGAGGAACTTTACAGCCGGTTGAAAAGGCA 890336 Query 451862 TTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAATTGTGCTTGTAGGAGGTTCT 451921 | | ||| | ||||| ||||| | ||||| ||||| || || ||||| ||| Sbjct 890337 CTTAAGGATGCCAAAATGGATAAAGGCTCTGTGGATGACATTGTTCTAGTGGGAGGCTCT 890396 Query 451922 ACACGAATTCCTAAAATTCAAGATATGTTG----TCTTCTTATTTTGGAGGAAAACAACT 451977 || | ||||| ||||||||| | || || |||| ||| | || |||| | Sbjct 890397 ACCAGGATTCCGAAAATTCAACAGCTGCTGCAAAACTTC----TTTAGCGGCAAACCGTT 890452 Query 451978 ATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTAT 452037 | ||| | || |||||||| ||||| || ||||| ||||| || ||||| || | Sbjct 890453 AAACCTCAGCATCAACCCTGATGAGGCTGTAGCCTATGGGGCTGCCGTGCAAGCTGCAGT 890512 Query 452038 TCTAACAGGTTCAGATGA-TGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTC 452096 | | | || | ||| | || ||| | ||| | || | ||||||||| | || | Sbjct 890513 TTTGAATGGAGAAACTGACTCGAAGATTCAG-GATGTGTTGCTTGTAGATGTAGCGCCGC 890571 Query 452097 TATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTT 452156 | ||| | || |||||||||| || || | ||||| || | || | | ||| || Sbjct 890572 TGTCTTTGGGTATTGAAACAGCCGGAGGCGTAATGACGAAGATCATCGA---AAGAAATT 890628 Query 452157 C---TATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGT--GATAACCAACCAGG 452211 | ||||| || || ||| || || || | || | | | || |||||||| | Sbjct 890629 CGAGAATTCCATGCAAGCAGACCCAGACGTTCA--CCACCTACTCCGACAACCAACCGGC 890686 Query 452212 TGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGG 452271 |||||| |||||||| ||||| || ||| | || ||||| ||| || ||| || || Sbjct 890687 TGTAACCATTCAAGTATTTGAGGGCGAAAGAGCCATGACCAAAGACAACAAT-CTCTTGG 890745 Query 452272 AGAATTT--ACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATT 452329 | || || || | ||||||||| || | || |||| |||| ||| || Sbjct 890746 GCACGTTCGAC-CTAACTGGCATTCCTCCGGCCCCTCGTGGTGTTCCTAAAATCGAAGTT 890804 Query 452330 ACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCA----TC 452385 |||| ||| | || || ||||| || || ||||| ||| |||| || | || Sbjct 890805 ACCTTCGATATGGACGCTAATGGCATCCTAAATGTTTCTGC----GAAAGATAACAGTTC 890860 Query 452386 TGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATAT 452445 || | | | ||| || || || | |||||||| ||| ||||| ||| ||||| Sbjct 890861 AGGCAGAGAAAGAAACATCACCATCAAGAATGATAAGGGCCGACTATCTCAAGCCGATAT 890920 Query 452446 TGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAACAA 452494 || | ||| | ||| || || || |||||| || |||||| || Sbjct 890921 CGACAGGATGCTTTCTGAGGCCGACCGATACAAGGACGAAGATGAAAAA 890969 Score = 163 bits (180), Expect = 1e-34 Identities = 381/565 (67%), Gaps = 25/565 (4%) Strand=Plus/Plus Query 450902 GTCAAAAAAGT---AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTT 450958 || ||||||| |||| |||| || ||| | || ||||| | ||| || || ||||| Sbjct 882366 GTGAAAAAAGCTCCAGCAGTTGGTATCGATTTGGGCACCACATATTCCTGCGTCGGTGTC 882425 Query 450959 TACCAAAATGGAAATGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCA 451018 | || ||||||| || ||||| || || || ||||| ||| ||||| || || || Sbjct 882426 TGGCAGCATGGAAAAGTGGAAATCATCGCTAACGACCAGGGAAACCGAACAACACC--CA 882483 Query 451019 TGGGTAAGTT----TTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAA-T 451071 | || ||| ||||||| || || | || | ||| | ||||| || | ||| | Sbjct 882484 --GTTATGTTGCCTTTACGGACTCTGAGCGTCTCCTTGGGGACGCTGCCAAGAACCAAGT 882541 Query 451072 GG---TAAATTCAAATGCCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTAT 451128 || | ||| | | |||| ||| || | ||| || ||| | || ||||| || | Sbjct 882542 GGCTATGAATCC---TTCCAA---CACCGTTTTTGACGCCAAAAGATTGATTGGACGCAA 882595 Query 451129 GTATGATGATGATACTGTACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCA 451188 |||||| || | | ||| | || | || || | | | || || | | Sbjct 882596 GTATGACGACCCGAAAATCCAACAGGACATCAAGCACTGGCCATTCAAAGTGGTCAGCGA 882655 Query 451189 AAAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGA 451248 || || ||| | || ||||| | | ||||| |||| |||| |||||||| || Sbjct 882656 CTGCGGCAAACCCAAGATCCAAGTCGAGCACAAAGGCGAAATCAAAAAGTTTGCTCCGGA 882715 Query 451249 AGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTC 451308 |||| | || |||||| | || || ||||| |||||||| ||| || |||| Sbjct 882716 AGAAGTCAGCTCCATGGTTTTAACAAAGATGAAGGAAACAGCGGAAGCGTACCTTGGACA 882775 Query 451309 -TCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAG 451367 |||| ||| || |||||||| || ||||| || |||||||| || | |||||||||| Sbjct 882776 ATCCA-TTAAAGACGCAGTAATCACCGTTCCTGCATATTTCAACGACTCTCAACGGCAAG 882834 Query 451368 CAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTA 451427 |||| ||||| || ||| ||| || || || |||||| | |||| || |||||||| | Sbjct 882835 CAACCAAAGACGCCGGAGTTATAGCAGGATTGAATGTTATGAGAATCATCAATGAACCCA 882894 Query 451428 CAGCAGCTGCTCTAGCATATGGACT 451452 | || ||||| |||| |||||||| Sbjct 882895 CCGCCGCTGCCTTAGCTTATGGACT 882919 Score = 158 bits (174), Expect = 5e-33 Identities = 409/610 (67%), Gaps = 30/610 (5%) Strand=Plus/Plus Query 451896 ATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGT--- 451952 |||| ||||| || || ||||| || ||| ||||||| ||||| ||| | ||||| Sbjct 883363 ATGACATTGTCCTGGTGGGAGGATCGACAAGAATTCCAAAAATACAACAACTGTTGCAAA 883422 Query 451953 -CTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCA 452011 |||||| | ||||||||||| | || | ||||| ||||||||||| || Sbjct 883423 ACTTCTTCAAT----GGAAAACAACTCAATCTCAGTATTAATCCAGATGAAGCTGTAGCT 883478 Query 452012 TATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGA---TGA-TGAAAAATTAGG 452067 |||||||| ||||||||||| ||| || | | || ||| ||| | || ||| Sbjct 883479 TATGGTGCAGCAGTTCAAGCCGCTGTTTTGA---GTGGAGACACTGACAGCAAGATT-CA 883534 Query 452068 AGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAAT 452127 |||| | || ||||| ||||| || || ||||| || || | |||||||| || || | Sbjct 883535 AGATGTACTTTTAGTGGATGTTACGCCACTATCCCTGGGCATCGAAACAGCCGGAGGCGT 883594 Query 452128 GATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAG 452187 |||||| || | ||| || || | |||||||| || || |||| ||||| Sbjct 883595 GATGACGAAGATCATTGAAAGAAATGCCAGAATTCCTTGCAAGCAGTCGCAAATATTTA- 883653 Query 452188 TACAGCAAGT--GATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCA 452245 || | | | || |||||||| | |||||| || ||||| ||||| || ||| | || Sbjct 883654 -CCACCTACTCCGACAACCAACCGGCTGTAACCATCCAAGTCTTTGAGGGTGAAAGAGCC 883712 Query 452246 ATGACACGAGATAATAATAAACTAGGAGAATTT--ACTCTTTCAAACATTCCTCCTATGC 452303 ||||| ||| || ||| || || | ||| || || | ||||||||| | Sbjct 883713 ATGACCAAAGACAACAAT-CTCTTGGGCACTTTCGAC-CTAACTGGCATTCCTCCAGCCC 883770 Query 452304 CAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATG 452363 | | ||| ||| |||| ||| | || | || | ||||| ||||||||||| || | Sbjct 883771 CTCGTGGAGTCCCTAAAATCGAAGTCACTTTCGACCTAGATGCCAATGGTATTCTCAACG 883830 Query 452364 TGAGTGCAGTTGAA-AAATCA--TCTGGAAAATCAGAAAAAATTACAATTACTAATGATA 452420 || |||| || | | || || || ||| | ||| ||||| || | || || | Sbjct 883831 TG---GCAGCAAAAGATACCAGCTCAGGCAAAGAACGAAATATTACCATCAAGAACGACA 883887 Query 452421 AAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGG 452480 || ||| ||||| ||| ||||| || | |||| | ||||| ||||| | ||| | Sbjct 883888 AAGGCCGCCTATCTCAAGCTGATATCGACAGAATGTTGTCCGAAGCTGAAAAGTACAAAG 883947 Query 452481 ATGATGATGA 452490 | || || || Sbjct 883948 AAGAAGACGA 883957 Score = 140 bits (154), Expect = 1e-27 Identities = 392/589 (67%), Gaps = 16/589 (3%) Strand=Plus/Minus Query 451910 GTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTTGGAGGA 451969 |||||||| || ||| |||| || ||||| ||| || |||| || || ||| Sbjct 871047 GTAGGAGGATCAACAAGAATCCCAAAAATCCAACATCTGTTACAAAACTACTTCAATGGA 870988 Query 451970 AAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAA 452029 |||||||| | || | ||||| ||||||||||| || ||||| || |||||||| Sbjct 870987 AAACAACTCAATCTCAGTATTAATCCAGATGAAGCTGTAGCTTATGGCGCAGCAGTTCAG 870928 Query 452030 GCAGCTATTCTAACAGGTTCAGATGA-TGAAAAATT-AGGAGATA-TTCTGTTAGTAGAT 452086 || ||| |||||| ||| | ||| | || ||| |||| || ||||| || ||| Sbjct 870927 GCTGCTGTTCTAAGTGGTGAAACTGACAGCAAGATTCAGGACGTACTTCTG---GTGGAT 870871 Query 452087 GTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAA 452146 || || || ||||||||||| | |||||||| || || ||||||| || | ||| || Sbjct 870870 GTTACGCCACTATCTCTTGGCATCGAAACAGCAGGAGGCGTGATGACGAAAATTATTGAA 870811 Query 452147 CGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAA 452206 || | ||||| || | | | ||| || || | ||| || ||||| Sbjct 870810 AGAAATGCGAGAATTCCCTGCAGACAATCTCAGACGTTCACAACATACGCCGACAACCAG 870751 Query 452207 CCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAA 452266 |||| ||||| |||||||| |||||||| ||| | | |||||| ||| || || | Sbjct 870750 CCAGCAGTAACCATTCAAGTATTTGAAGGTGAAAGAACCATGACAAAAGACAACAACTTA 870691 Query 452267 CTAGGAGAATT-TACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGA 452325 | ||| || ||| | | |||||||| ||||| ||| || ||||||| Sbjct 870690 TTGGGAACCTTCGACT-TGACTGGAATTCCTCCAGCACCAAGAGGAGTGCCCAAAATTGA 870632 Query 452326 AATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAA-AAATCA- 452383 | |||| || | ||||||||||||||||| || || | | | || | | || Sbjct 870631 TGTCACCTTCGACCTGGATGCAAATGGTATTCTGAACGT---TTCCGCCAAAGACACCAG 870575 Query 452384 -TCTGGAAAATCAG-AAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAG 452441 || || | | ||| |||| || || || | || || ||| ||| ||||| ||| | Sbjct 870574 CTCAGGCAGA-CAGCAAAATATCACCATCAAGAACGACAAAGGCCGCCTATCTCAAGCTG 870516 Query 452442 ATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGA 452490 |||| || | ||| | ||||| || | || |||||| || ||||| Sbjct 870515 ATATCGACAGGATGTTGTCCGAAGCGGAGAGATACAAGGAAGAAGATGA 870467 >seq6955 Length=469295 Score = 156 bits (172), Expect = 2e-32 Identities = 175/234 (75%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| || ||||| || ||||| ||||| ||||| ||||| || ||| |||| Sbjct 94639 AATGCAAATTTTTGTAAAAACCCTTACTGGCAAAACAATTACACTTGAAGTCGAACCATC 94698 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| ||||||| | ||||| || ||||| || ||||||||||||||||| || || Sbjct 94699 TGATACCATTGAAAATGTTAAAGCCAAGATTCAGGACAAGGAAGGAATTCCTCCAGACCA 94758 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | |||||||| | || ||||| | ||||||||| | || ||| | || || || Sbjct 94759 ACAGAGGTTAATTTTTGCCGGCAAACAGTTAGAAGATGGACGTACATTGTCTGACTACAA 94818 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 || | || || | || | || || || || |||||||||||| ||| || Sbjct 94819 CATCCAGAAAGAATCCACTTTACATTTGGTTTTGAGACTGAGAGGAGGAATGCA 94872 Score = 145 bits (160), Expect = 3e-29 Identities = 142/183 (78%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| |||||||| |||||||| ||||||||||| ||||| || ||| |||| Sbjct 95779 AATGCAGATTTTTGTTAAAACTCTGACTGGCAAAACTATTACACTTGAAGTCGAACCATC 95838 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| ||| ||| | |||| ||| || || || ||||||||||||||||| || || Sbjct 95839 TGATACCATCGAAAATGTTAAGGCAAAGATCCAGGACAAGGAAGGAATTCCTCCAGACCA 95898 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | |||||| |||| |||||| | |||||||| | || | | |||||||| Sbjct 95899 ACAGAGACTGATTTTCGCAGGCAAACAATTGGAAGATGGCCGCACCCTATCAGATTATAA 95958 Query 391229 TAT 391231 || Sbjct 95959 CAT 95961 Score = 140 bits (154), Expect = 1e-27 Identities = 175/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||||| |||||||| || ||||| |||||| |||| Sbjct 94412 ATGCAGATTTTCGTGAAGACTTTGACTGGCAAAACTATCACACTTGAGGTTGAACCATCA 94471 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| ||||| || |||||||| |||||||||||||| || || ||| Sbjct 94472 GACACTATTGAGAACGTTAAAGCCAAGATTCAAGACAAGGAAGGAATTCCCCCAGACCAA 94531 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| || |||||| | || ||||| | |||||||| | || | | |||||||| Sbjct 94532 CAACGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGCCGCACCCTATCAGATTATAAC 94591 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACAttttttt 391289 || | || || | || || || || || || ||| ||||||| ||| || ||||| Sbjct 94592 ATCCAAAAAGAATCCACTCTGCATTTGGTGTTGAGATTGAGAGGTGGAATGCAAATTTTT 94651 Score = 140 bits (154), Expect = 1e-27 Identities = 166/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| || ||||| || ||||| ||||| ||||| ||||| || || | || Sbjct 95095 AATGCAAATTTTTGTCAAAACTCTTACTGGAAAAACCATTACACTTGAAGTCGAGCCTTC 95154 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| |||||| | ||||| || || || || || ||||||||||| || || || Sbjct 95155 TGATACTATTGAAAATGTTAAAGCCAAGATCCAGGACAAAGAAGGAATTCCCCCAGACCA 95214 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | |||||| |||| |||||| | ||||| || |||||||| | ||||| || Sbjct 95215 ACAGAGACTGATTTTCGCAGGAAAACAATTGGAAGACGGCCGAACTTTGTCTGATTACAA 95274 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || |||||||| || | || ||||||| Sbjct 95275 CATCCAGAAGGAATCCACTCTTCACTTGGTGCTCAGGTTGAGAGG 95319 >seq7641 Length=1756407 Score = 109 bits (120), Expect = 2e-18 Identities = 129/175 (74%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 451222 AGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAA 451281 ||||||||| ||||| |||||||||||||| || || |||||| | || |||||||| Sbjct 1564111 AGGTGAAACGAAAACCTTTGCTCCTGAAGAGATCAGTTCCATGGTTTTGACGAAAATGAA 1564052 Query 451282 AGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGC 451341 || ||||| || |||| | || | | ||||||| || ||||| ||||| || Sbjct 1564051 GGACACAGCTGAGGCATATTTGGGGAAGAGTGCTTCTGATGCCGTTATTACCGTTCCGGC 1563992 Query 451342 TTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396 ||||| || || ||| | ||||| ||||||||||| ||| ||| |||||| Sbjct 1563991 ATATTTTAACGACAGCCAAAGACAAGCTACTAAAGATGCCGGAACTATCGCTGGT 1563937 >seq7609 Length=530548 Score = 89.7 bits (98), Expect = 2e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 ||||| || ||||||||||| || | ||| |||| || ||||| || || ||||| || Sbjct 200901 ACTGTGCCAGCTTATTTCAACGACTCCCAAAGGCAGGCCACTAAGGACGCTGGACAAATC 200960 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 || || ||||| || || || | || |||||||| || || |||||||| || ||||| Sbjct 200961 GCCGGGTTAAACGTACTGAGAGTGATCAATGAACCCACTGCCGCTGCTCTTGCCTATGG 201019 >seq6657 Length=20173 Score = 89.7 bits (98), Expect = 2e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 || ||||||||| | || | ||||| | || | | ||||| || ||||| ||| | Sbjct 5518 AATATGAAAGAATCTGCTTCAGAATATTTAGGAGCGACGGTTACAGAAGCAGTTATTTCA 5459 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 ||||| || ||||||| | |||||||| | | || || |||| ||||| | | ||| Sbjct 5458 GTTCCTGCCTATTTCAGTAATGCACAAAAGAAGGCTACAAAAGCTGCAGCTAAACTAGCT 5399 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGC 451437 |||||||| || ||| | | |||| |||||| ||||||||| Sbjct 5398 GGTTTAAAGGTACTTAAATTGATTACTGAACCCGTAGCAGCTGC 5355 >seq6348 Length=1092195 Score = 89.7 bits (98), Expect = 2e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378 || ||||| || || || || ||||| ||||| || | ||||||||||| || ||||| Sbjct 739471 GACGCAGTCATCACCGTCCCAGCTTACTTCAACGACTCGCAACGGCAAGCCACCAAAGAC 739412 Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGC 451437 || ||| ||||| ||||| || || |||||||| || || ||||| || ||||| || Sbjct 739411 GCCGGAGTGATTGCAGGTTTGAACGTGCTTCGAATCATCAACGAACCAACTGCAGCCGC 739353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975511129852304