Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq7319 389 3e-102 seq7320 134 1e-25 seq6348 98.7 8e-15 seq7641 95.1 9e-14 seq7357 93.3 3e-13 >seq7319 Length=1095930 Score = 389 bits (430), Expect = 3e-102 Identities = 968/1457 (66%), Gaps = 21/1457 (1%) Strand=Plus/Minus Query 517264 CACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCT 517323 ||| || ||||||||||||||||| | || || |||||||| |||| |||||| || | Sbjct 883832 CACGTTGAGAATACCATTGGCATCTAGGTCGAAAGTGACTTCGATTTTAGGGACTCCACG 883773 Query 517324 CTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAA 517383 | || || || || || | | || || |||| ||| || ||||| || | Sbjct 883772 AGGGGCTGGAGGAATGCCAGTTAGGTCGAAAGTGCCCAAGAGATTGTTGTCTTTGGTCAT 883713 Query 517384 TTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGT 517443 || ||||||||| || | |||||| || || | | ||| || || || || || || Sbjct 883712 GGCTCTTTCACCCTCAAAGACTTGGATGGTTACAGCCGGTTGGTTGTCGGAGTAGGTGGT 883653 Query 517444 AAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 517503 ||||| | || | || ||||||||| | | ||||| ||||| || || ||||| | Sbjct 883652 AAATATTTGCGACTGCTTGCAAGGAATTCTGGCATTTCTTTCAATGATCTTCGTCATCAC 883593 Query 517504 ACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 517563 || || |||||||| | || || || || || || ||||| |||| | | || ||| Sbjct 883592 GCCTCCGGCTGTTTCGATGCCCAGGGATAGTGGCGTAACATCCACTAAAAGTACATCTTG 883533 Query 517564 AAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 517623 || || ||||| | ||| | || ||| ||||||| || |||||||| || || Sbjct 883532 AATCTTGCTGTCAGTGTCTCCACTCAAAACAGCGGCTTGAACTGCTGCACCATAAGCTAC 883473 Query 517624 AGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAG 517683 ||||||||| ||||||| | | ||| |||| ||| |||||||| || ||| | || Sbjct 883472 AGCTTCATCTGGATTAATACTGAGATTGAGTTGTTTTCCATTGAAGAAGTTTTGCAACAG 883413 Query 517684 TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 517743 |||| || || ||||| | | |||||||| || | ||||| ||||| | || || Sbjct 883412 TTGTTGTATTTTTGGAATTCTTGTCGATCCTCCCACCAGGACAATGTCATGGA--TG-GA 883356 Query 517744 ---TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAA 517800 |||||||| ||| | || || | ||||||| ||||| | || |||| || Sbjct 883355 GCCTTTATCCATTTTGGCGTCAGCTAGAGCTTTTTCCACGGGCTGGAGGGTTCCTCTGAA 883296 Query 517801 CAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCC 517860 ||||| | | |||||||||||| | |||| ||||| || | | || | || Sbjct 883295 TAAGTCGGCATTTAGTTCTTCGAATCTTGCTCGAGTAACTTTGGTGTAGAAGTCGACGCC 883236 Query 517861 TTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGC 517920 |||||| | || |||| |||||| || | || ||| ||||| || | | || || Sbjct 883235 TTCGAATAGAGCGTCAATTTCAATGGTTGCTTCAGTACTTGAAGAGAGAGTTCTCTTGGC 883176 Query 517921 ACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA-ATCTGTTT 517979 ||||| ||| || || ||||| | || ||| ||| | | || || |||| | | Sbjct 883175 GCGTTCTGCTGCCGTTCTCAGTCTCCTCAAAGCTCTTG-GGTTGGAGCGAAGATCTTTCT 883117 Query 517980 TATATTTTCTCTTGAAATCTTCAACACACCATGTT-ACAAGACGATTATCAAAATCTTCA 518038 | ||||||||||||| ||||| | || ||| || | | || ||||| ||||| Sbjct 883116 TGAATTTTCTCTTGAATTCTTCGGC-CAAGTGGTTGACTAATCTGTTGTCAAAGTCTTCT 883058 Query 518039 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA---GTCCATCTTCAAGA 518095 || ||||| | || | || | || | ||| || | || | ||| || || | Sbjct 883057 CCGCCCAAATGGGTGTCACCAGCTGTGGATCTGACCTCAAACAATGATCCTTCATCGATG 882998 Query 518096 GACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT 518155 | | | | ||||| || || || |||| || ||||| || |||||| ||||| Sbjct 882997 GTAAGGATTGAGACATCGAAAGTGCCGCCTCCCAGGTCGAAAATTAGCACATTCTTTTCT 882938 Query 518156 TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATT 518215 | ||| || || || ||||| || || ||||| || || |||||||| || ||| Sbjct 882937 CCCTTCAAGTTCTTGTCCAGTCCATAAGCTAAGGCAGCGGCGGTGGGTTCATTGATGATT 882878 Query 518216 CTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 518275 |||| |||||| | || || || ||| || ||||| || ||||| | ||| || ||| Sbjct 882877 CTCATAACATTCAATCCTGCTATAACTCCGGCGTCTTTGGTTGCTTGCCGTTGAGAGTCG 882818 Query 518276 TTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTT 518335 || |||||||||||||| || || || || || | | || |||| || ||||| Sbjct 882817 TTGAAATATGCAGGAACGGTGATTACTGCGTCTTTAATGGATTGTCCAAGGTA--CGCTT 882760 Query 518336 --GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCT 518393 || |||| ||||| || |||||| ||| || | || ||| || | | | | | Sbjct 882759 CCGCTGTTTCCTTCATCTTTGTTAAAACCATGGAGCTGACTTCTTCCGGAGCAAACTTTT 882700 Query 518394 TGGATTCATTTTGATATGAT--ACTTCAAAATATGGTTTATTACCAACATTAATAACTTT 518451 || ||| || | || | |||| | | ||||| | | | | ||||| Sbjct 882699 TGATTTCGCCTT--TGTGCTCGACTTGGATCTTGGGTTTGCCGCAGTCGCTGACCACTTT 882642 Query 518452 AAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAA 518511 |||||||||| || || || ||| | | |||| | | | | | ||||| || Sbjct 882641 GAATGGCCAGTGCTTGATGTCCTGTTGGATTTTCGGGTCGTCATACTTGCGTCCAATCAA 882582 Query 518512 TCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATC 518571 || ||| || ||||||| || |||| ||||| || || |||| | ||||| || || Sbjct 882581 TCTTTTGGCGTCAAAAACGGTGTTGGAAGGATTCATAGCCACTTGGTTCTTGGCAGCGTC 882522 Query 518572 TCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTG 518631 |||| ||| | || | || ||||| | |||||| || ||||| || || || || Sbjct 882521 CCCAAGGAGACGCTCAGAGTCCGTAAAGGCAACATAACTGGGTGTTGTTCGGTTTCCCTG 882462 Query 518632 ATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGT 518691 || || || || ||||| ||||| |||| ||||| ||||| || || | | || || Sbjct 882461 GTCGTTAGCGATGATTTCCACTTTTCCATGCTGCCAGACACCGACGCAGGAATATGTGGT 882402 Query 518692 TCCTAAATCAATACCAA 518708 || ||||| ||||||| Sbjct 882401 GCCCAAATCGATACCAA 882385 Score = 385 bits (426), Expect = 4e-101 Identities = 969/1459 (66%), Gaps = 19/1459 (1%) Strand=Plus/Minus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 |||| ||||| || || ||||| || |||| ||| || || ||||| |||| ||| || Sbjct 890845 GCAGAAACATTTAGGATGCCATTAGCGTCCATATCGAAGGTAACTTCGATTTTAGGAACA 890786 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 || | | || || || || || | | || || |||| ||| || ||||| Sbjct 890785 CCACGAGGGGCCGGAGGAATGCCAGTTAGGTCGAACGTGCCCAAGAGATTGTTGTCTTTG 890726 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438 || | || ||| ||||| || | ||| || || || | | ||| || || || || Sbjct 890725 GTCATGGCTCTTTCGCCCTCAAATACTTGAATGGTTACAGCCGGTTGGTTGTCGGAGTAG 890666 Query 517439 GTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 517497 || || || ||||| | | || || |||||| | | ||||| || || || || || Sbjct 890665 GTGGTGAACG-TCTGGGTCTGCTTGCATGGAATTCTCGAATTTCTTTCGATGATCTTCGT 890607 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 517557 ||| | || || |||||||| | ||| | ||| || || | ||||| || || | | Sbjct 890606 CATTACGCCTCCGGCTGTTTCAATACCCAAAGACAGCGGCGCTACATCTACAAGCAACAC 890547 Query 517558 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 517617 || |||| || ||||||| ||| | || || ||||| | ||||| ||||| Sbjct 890546 ATCCTGAATCTTCGAGTCAGTTTCTCCATTCAAAACTGCAGCTTGCACGGCAGCCCCATA 890487 Query 517618 TGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGA 517677 || ||||| |||||||| || | | |||| ||| || | || || ||| Sbjct 890486 GGCTACAGCCTCATCAGGGTTGATGCTGAGGTTTAACGGTTTGCCGCTAAAGAAGTTTTG 890427 Query 517678 AAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCAC 517737 || || ||| | || ||||| | | || ||||| |||| ||||| |||| ||| Sbjct 890426 CAGCAGCTGTTGAATTTTCGGAATCCTGGTAGAGCCTCCCACTAGAACAATGTCATCCAC 890367 Query 517738 CTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCT 517797 |||||||| ||| | |||| | | |||||||| || | | | |||| Sbjct 890366 AGAGCCTTTATCCATTTTGGCATCCTTAAGTGCCTTTTCAACCGGCTGTAAAGTTCCTCT 890307 Query 517798 AAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCA 517855 |||| || ||| | |||||||||| | |||| | ||| | | || || || Sbjct 890306 GAACAGATCGGAATTCAATTCTTCGAATCTGGCTCGGG--AGATTTTAGTGTAGAAGTCC 890249 Query 517856 ATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGT 517915 | |||||||| | || ||||| ||| | || | || || || || | | ||| Sbjct 890248 ACCCCTTCGAATAGAGCATCAATTTCCAGAGTGGCTTCGGTGCTGGAGGACAAAGTTCGT 890189 Query 517916 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA--T 517973 || || || ||| |||||| || | ||||| | ||| ||| | ||| | | | | Sbjct 890188 TTTGCCCGCTCAGCTGCTGTTCTCAATCTTCTAATTGCTCTTG--GGTTGCTGCGGAGGT 890131 Query 517974 CTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAAT 518033 || |||| |||||||| || || || | | | || ||||| || || || | Sbjct 890130 CTTTTTTGAATTTTCTCAAAAATTCATCGGCGAAGTGATTGACTAGACGGTTGTCGAAGT 890071 Query 518034 CTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT---CCATCTT 518090 |||||||||| | | || | |||| ||| | | |||| | ||| ||| || || | Sbjct 890070 CTTCACCTCCAAGATGGGTGTCGCCTGCCGTCGATTTTACCTCGAATAGTGAACCTTCAT 890011 Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150 ||| || | | | ||||| ||||| || || | ||| ||||| || || ||| Sbjct 890010 CAATAGTTAGGATGGACACATCGAAAGTTCCGCCTCCAAGATCGAAAATCAGGACGTTCT 889951 Query 518151 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 518210 |||| | | | || || || || ||||| |||| ||||| || || ||||| |||| Sbjct 889950 TTTCGCCCTTTAGATTCTTGTCCAGGCCATAAGCAAGGGCAGCTGCGGTAGGTTCGTTAA 889891 Query 518211 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 518270 ||||||||| ||||| ||||||||||| ||| || |||||||||||||| ||||| | Sbjct 889890 TAATTCTCATTACATTTAGACCAGCAATCACTCCAGCGTCTTTAGTGGCTTGCCTTTGGG 889831 Query 518271 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAG 518330 ||||||| || || || ||||| |||| ||| ||||| |||| | | |||| ||| | Sbjct 889830 AATCGTTGAAGTAGGCTGGAACGGTAACAACAGCATCTTTTACAGTTGTTCCAAGATACG 889771 Query 518331 CGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG--GGGAATA 518388 | ||| |||| |||||||| |||||| ||| || |||| ||| | | ||| Sbjct 889770 CCTCTGCAGTTTCCTTCATTTTCGTTAAAACCATGGAGCTGATTTCTTCAGGTGCGAACG 889711 Query 518389 TTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC 518448 || || | ||| | | | |||| | | |||||| | | || | || Sbjct 889710 TT--TTAGTTTCGCCCTTGTGTTCGACTTGGAGTTTTGGTTTTCCATGGTCGTTGACGAC 889653 Query 518449 TTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACCAA 518507 |||||| ||||| | ||| |||||| ||| | ||| || |||| || | | |||| Sbjct 889652 TTTAAACGGCCAATGTTTGATATCTTGTTGGA-TCTTGGGATCATCGAATTTGCGTCCAA 889594 Query 518508 TTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTG 518567 ||| ||||||||| || || | ||| || | ||| || || ||| |||| | || || | Sbjct 889593 TTAGTCGTTTTGCGTCGAAGACAGTGTTAGATGGGTTCATGGCAACTTGGTTCTTTGCGG 889534 Query 518568 CATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTAC 518627 | ||||||| ||| | || || |||||||| | |||||| || |||||||| || | Sbjct 889533 CGTCTCCAAGTAGACGCTCGGTGTCTGTAAAAGCAACATAACTGGGGGTTGTGCGGTTTC 889474 Query 518628 CTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAG 518687 |||| || || || || ||||| ||||| |||| |||||| ||||| ||||| | | | Sbjct 889473 CTTGGTCGTTGGCGATGATTTCCACTTTTCCATGTTGCCAGACACCAACACACGAATATG 889414 Query 518688 TTGTTCCTAAATCAATACC 518706 | || || ||||||||||| Sbjct 889413 TGGTACCCAAATCAATACC 889395 Score = 311 bits (344), Expect = 7e-79 Identities = 691/1023 (68%), Gaps = 29/1023 (3%) Strand=Plus/Plus Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324 || || ||||||||||| ||||||| || || ||||| ||||||| || || ||||| Sbjct 870593 ACGTTCAGAATACCATTTGCATCCAGGTCGAAGGTGACATCAATTTTGGGCACTCCTCTT 870652 Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTA-TTATTATCTTTAGTGAA 517383 | || || || || || ||| | || ||||||| || | || || ||||| || | Sbjct 870653 GGTGCTGGAGGAATTCCAGTCAAGTCGAAGGTTCCCA-ATAAGTTGTTGTCTTTTGTCAT 870711 Query 517384 TTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGT 517443 ||| |||||| || || | ||| || || ||| | | || || || | || ||||| Sbjct 870712 GGTTCTTTCACCTTCAAATACTTGAATGGTTACTGCTGGCTGGTTGTCGGCGTATGTTGT 870771 Query 517444 AAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAA 517502 || |||| |||| | | || |||||| | | ||||| |||||||| || ||||| | Sbjct 870772 GAA-CGTCTGAGATTGTCTGCAGGGAATTCTCGCATTTCTTTCAATAATTTTCGTCATCA 870830 Query 517503 TACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTT 517562 || ||||||||||| | |||||||| || || || ||||| || || | | | | Sbjct 870831 CGCCTCCTGCTGTTTCGATGCCAAGAGATAGTGGCGTAACATCCACCAGAAGTACGTCCT 870890 Query 517563 GAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 517622 ||| || ||||||| |||| |||| ||| || |||| || || ||||| || | Sbjct 870891 GAATCTTGCTGTCAGTTTCACCACTTAGAACAGCAGCCTGAACTGCTGCGCCATAAGCTA 870950 Query 517623 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT---TGAAA 517679 |||||||||| ||||||| | | ||| |||| ||| |||||||| | || | | | Sbjct 870951 CAGCTTCATCTGGATTAATACTGAGATTGAGTTGTTTTCCATTGAAGTAGTTTTGTAACA 871010 Query 517680 GAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCT 517739 || |||| || || || || | | ||||||||| || || || || || || | | Sbjct 871011 GATGTTGGATT---TTTGGGATTCTTGTTGATCCTCCTACCAAGACGATGTCGTGGA--T 871065 Query 517740 GTGA--TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCT 517797 | | |||||||| | | ||| | | |||||||||| || | |||| |||| Sbjct 871066 GGAACCTTTATCCATTCGGGCATCGGCCAGAGCTTTTTCAACAGGCTGAAGAGTTCCTCT 871125 Query 517798 AAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAAT 517857 || ||||| | | | |||||||||| | |||| | | | || | |||| || Sbjct 871126 GAATAAGTCAGCATTCAATTCTTCGAATCTTGCTCGACTGACTTTGGTGTAGAAATCGAT 871185 Query 517858 TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTT 517917 |||||||| | || |||| ||| || || | || ||| ||||| || | | || Sbjct 871186 GCCTTCGAATAGAGCGTCAATTTCGATGGTTGCTTCAGTACTTGAAGACAGAGTTCTCTT 871245 Query 517918 AGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGA-TTGATTCAA-ATCT 517975 || ||||| ||||| ||||||| | | |||| ||| || ||||| || |||| Sbjct 871246 GGCGCGTTCTGCCGCTGTTCTTAGTCGCCTAAGGGCTCTTG--GATTTGATCGAAGATCT 871303 Query 517976 GTTTTATATTTTCTCTTGAAATCTTCAACACACCATG----TTACAAGACGATTATCAAA 518031 | | |||| |||||||| ||||| | ||| | |||| | | || ||||| Sbjct 871304 TTCCTGAATTTCCTCTTGAATTCTTC----CGCCAAGTGGTTTACTAATCTGTTGTCAAA 871359 Query 518032 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG---TCCATC 518088 ||||| || |||| | || | |||| |||||||| |||| || || ||| || Sbjct 871360 GTCTTCTCCGCCCAGATGGGTGTCACCTGCTGTAGCTCTGACTTCAAATAGTGATCCCTC 871419 Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148 || | | ||||| | ||||| || || || |||| || ||||| || ||||| Sbjct 871420 ATCGATGGTCAAAATTGAGACATCGAAAGTGCCGCCTCCCAAGTCGAAAATGAGCACATT 871479 Query 518149 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 518208 ||||| | || || || | |||||| || |||||||| || || |||||||| Sbjct 871480 TCTTTCTCCTTTCAAATTCTTGTCCAAACCATAAGCTAAAGCAGCGGCGGTGGGTTCATT 871539 Query 518209 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 518268 || ||||||| |||||| | || || || ||| || ||||| || ||||| ||||| Sbjct 871540 GATGATTCTCATAACATTCAATCCTGCTATAACTCCGGCGTCTTTGGTTGCTTGCCTTTG 871599 Query 518269 TGA 518271 || Sbjct 871600 AGA 871602 Score = 105 bits (116), Expect = 5e-17 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 518520 CATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCA 518579 ||||||||| || |||| ||||| || || |||| | ||||| || || |||| | Sbjct 871851 CATCAAAAACGGTGTTGGAAGGATTCATAGCCACTTGGTTCTTGGCAGCGTCCCCAAGGA 871910 Query 518580 GATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCG 518639 || | || | || ||||| | |||||| || ||||| || || || || || || | Sbjct 871911 GACGCTCAGAGTCCGTAAAGGCAACATAACTGGGTGTTGTTCGGTTTCCCTGGTCGTTAG 871970 Query 518640 CAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAAT 518699 | || ||||| ||||| |||| ||||| ||||| || ||| | | || || || |||| Sbjct 871971 CGATGATTTCCACTTTTCCATGCTGCCAGACACCAACGCAAGAATACGTCGTGCCCAAAT 872030 Query 518700 CAATACCAATAGC 518712 |||||||||| || Sbjct 872031 CAATACCAATTGC 872043 Score = 102 bits (112), Expect = 6e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 518522 TCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGA 518581 ||||||| || |||| ||||| || || |||| | ||||| || || |||| ||| Sbjct 878965 TCAAAAACGGTGTTGGAAGGATTCATAGCCACTTGGTTCTTGGCAGCGTCCCCAAGGAGA 879024 Query 518582 TGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCA 518641 | || | || ||||| | |||||| || ||||| || || || || || || || Sbjct 879025 CGCTCAGAGTCCGTAAAGGCAACATAACTGGGTGTTGTTCGGTTTCCCTGGTCGTTAGCG 879084 Query 518642 ATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCA 518701 || ||||| ||||| |||| ||||| ||||| || ||| | | || || || |||||| Sbjct 879085 ATGATTTCCACTTTTCCATGCTGCCAGACACCAACGCAAGAATACGTCGTGCCCAAATCA 879144 Query 518702 ATACCAATAGC 518712 |||||||| || Sbjct 879145 ATACCAATTGC 879155 Score = 87.8 bits (96), Expect = 1e-11 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 635438 AAATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTT 635497 |||||||| || || ||||| || |||||||| || ||||| || ||| | || || | Sbjct 158063 AAATGTACTCTCATATTGACTGAAGGAGATTCGGCCAAAACGTTGGCTGTTTCCGGGTTG 158122 Query 635498 AATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTT 635557 | |||||||||||| |||||||| || || || || | || || |||||| | || || Sbjct 158123 AGTGTTATTGGAAGGGATTATTACGGCGTGTTTCCTTTAAGGGGTAAACTTCTAAACGTC 158182 Query 635558 AGGGATGC 635565 || || || Sbjct 158183 AGAGAAGC 158190 >seq7320 Length=937134 Score = 134 bits (148), Expect = 1e-25 Identities = 480/739 (65%), Gaps = 10/739 (1%) Strand=Plus/Plus Query 517415 ACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGT 517473 ||| ||| |||||||| || || || ||||| |||| | | || ||||| || Sbjct 230313 ACTCCAGGCTGATTATCAGAGTAGGTGGTAAAGG-TCTGAGTCTGCTTGGTGGGAATGGT 230371 Query 517474 TGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAG 517533 ||||| || | ||| | |||||| | ||| || || || || | || | || | Sbjct 230372 GGTGTTCCTCTTAATGAGGGCGGTCATCACACCTCCGGCAGTCTCAATGCCCAACGACAA 230431 Query 517534 AGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAAT 517593 ||||| ||||| | || | | || ||| | | ||| | | |||| | ||| Sbjct 230432 GGGAGTAACATCCAGAAGAAGCAAATCTTGCACCTCCTCAGACTTGTCACCATGTAAAAT 230491 Query 517594 AGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAG 517653 || ||||| | || |||||||| |||||||| || ||||| || | | | || || Sbjct 230492 GGCAGCTTGCACGGCCGCACCATACGCAACAGCCTCGTCAGGGTTGATCGACTTGTTCAG 230551 Query 517654 TTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATC 517712 | || || ||||| || | ||| | || ||| || || |||||||| | || | Sbjct 230552 CTCCTTTCCGTTGAAGAAGTCCTGAAGCAATT-TCTGGACTTTGGGAATACGGGTGGAGC 230610 Query 517713 CTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTT 517772 |||| ||||| || || || || || || ||||| |||| || | ||| | | | Sbjct 230611 CTCCTACTAACACGATGTCGTGGACTTGGGATTTGTCCATCTTAGCATCGCGAATGGCCT 230670 Query 517773 TTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTC 517832 ||||||| ||||| | | | |||| || | | | ||||||||| || | Sbjct 230671 TTTCAACAGGTTCCATGGTGGAACGGAACAGATCGGCATTCAATTCTTCGAAACGGGCAC 230730 Query 517833 TAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGT 517890 || || || | || || || |||||||| ||||| ||||| | ||| || | | Sbjct 230731 GGGT--GATGGAGGTGTAGAAGTCGATTCCTTCAAACAAGGAATCGATTTCGATGCTGGC 230788 Query 517891 TTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAA 517950 ||| || |||||||| || | | || || | |||||| || || || || | || | Sbjct 230789 TTGGGTTGAAGAAGACAGAGTCCTCTTCGCCCTTTCACAGGCAGTTCTGAGCCGTCTCAG 230848 Query 517951 GGCTTTTGCTGATTGATTCAAA-TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACC 518009 |||| | || | || | | || |||| || || | |||||| || | ||| | Sbjct 230849 GGCTCTCT-TGTTGGAGGCGAGGTCCTTTTTGTACTTGCGCTTGAATTCCTGCACAAAGT 230907 Query 518010 ATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTC 518069 | || | | ||||| ||||||||||||||||| | ||| | ||| | |||| Sbjct 230908 GATTGACCATCCTGTTATCGAAATCTTCACCTCCCAAGTGAGTGTCTCCAGCAGTAGACT 230967 Query 518070 TTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCA 518129 |||||| ||| | ||||| |||| || || | | |||||| ||||||||||||| Sbjct 230968 TTACTTCGAAGATACCATCCTCAATAGTTAAGATGGACACATCAAAAGTTCCACCACCCA 231027 Query 518130 TATCAAAAATAAGTACATT 518148 ||| ||||| | ||| || Sbjct 231028 AATCGAAAATCAATACGTT 231046 Score = 107 bits (118), Expect = 1e-17 Identities = 124/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || || |||||||||||||||| || || |||||||||||||| || ||||| | ||| Sbjct 231256 TTCTTGTCAAGACCATACGCAATTGCGGCCGCAGTTGGTTCATTGATGATTCTGAGAACC 231315 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 | |||||| | || |||| | || || || ||||| | ||| || || || ||||| Sbjct 231316 TGAAGACCTGAGATAGTTCCAGAGTCCTTTGTTGCTTGACGTTGAGAGTCATTGAAATAA 231375 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGC 518331 || || || |||||||| || | || ||| |||||| | ||| || Sbjct 231376 GCTGGCACTGTAATAACAGCGTTGGTGACTGATTTACCTAAATAGGC 231422 >seq6348 Length=1092195 Score = 98.7 bits (108), Expect = 8e-15 Identities = 163/233 (70%), Gaps = 7/233 (3%) Strand=Plus/Plus Query 518079 AAAGT-CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAA 518137 ||||| || || |||| || || | | ||||| |||||| || |||| || ||| Sbjct 739242 AAAGTACCTTCATCAATAGCCAGGATGGACACATCGAAGGTTCCGCCTCCCAAGTCGAAA 739301 Query 518138 ATAAGTACATTCATTTCTTTGTCTTG---GTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 || || || ||| |||| | |||| ||| || || ||||| || || || || || Sbjct 739302 ATCAGCACGTTCTTTTC---GCCTTGCAGGTTCTTGTCCAGACCGTAGGCCAATGCGGCT 739358 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 ||||||||||| || || |||| | || || | ||| ||||| ||| || ||||| Sbjct 739359 GCAGTTGGTTCGTTGATGATTCGAAGCACGTTCAAACCTGCAATCACTCCGGCGTCTTTG 739418 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATC 518307 |||||||| | ||| || ||||| || || || || || || || || || || Sbjct 739419 GTGGCTTGCCGTTGCGAGTCGTTGAAGTAAGCTGGGACGGTGATGACTGCGTC 739471 >seq7641 Length=1756407 Score = 95.1 bits (104), Expect = 9e-14 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 518230 ACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGG 518289 |||||| || |||| ||||||||||| ||||||||||| |||||||||||||| || Sbjct 1563937 ACCAGCGATAGTTCCGGCATCTTTAGTAGCTTGTCTTTGGCTGTCGTTAAAATATGCCGG 1563996 Query 518290 AACAGTAATAACGGCATCAG 518309 ||| |||||||||||||||| Sbjct 1563997 AACGGTAATAACGGCATCAG 1564016 >seq7357 Length=1179844 Score = 93.3 bits (102), Expect = 3e-13 Identities = 131/182 (72%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 518116 GGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC--TTTGTCTTGGTTTTTATCA 518173 ||| |||||||| | ||||||||| || |||| || |||| || || || || Sbjct 919925 GGTGCCACCACCGAAATCAAAAATCAGCACATAGCGGTCGTTTTGGCTC--TTCTTGTCT 919868 Query 518174 AGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCA 518233 | ||||| |||| ||| || ||||| || || || ||||||| ||||| | ||| Sbjct 919867 AAGCCATATGCAACAGCGGCTGCAGTGGGCTCGTTTATAATTCGTTGAACATCCAAACCT 919808 Query 518234 GCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACA 518293 ||||| | ||||| || || |||||||||||||| || || || ||||| || || || Sbjct 919807 GCAATGGTGCCTGCGTCCTTCGTGGCTTGTCTTTGAGAGTCATTGAAATACGCTGGTACG 919748 Query 518294 GT 518295 || Sbjct 919747 GT 919746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780416084468728