Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq7319 235 4e-56 seq6955 113 4e-19 seq7387 104 2e-16 seq7320 104 2e-16 >seq7319 Length=1095930 Score = 235 bits (260), Expect = 4e-56 Identities = 340/478 (71%), Gaps = 14/478 (3%) Strand=Plus/Plus Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT---- 552169 ||||| ||||| || || || ||||| ||||||||||| ||||| | || |||| Sbjct 883362 CATGACATTGTCCTGGTGGGAGGATCGACAAGAATTCCAAAAATACAACAACTGTTGCAA 883421 Query 552170 AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGC 552229 || ||||| |||||| ||| || | ||| ||| ||||||||||||| ||||| || Sbjct 883422 AACTTCTT----CAATGGAAAACAACTCAATCTCAGTATTAATCCAGATGAAGCTGTAGC 883477 Query 552230 CTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAA 552289 |||||||| ||| ||||||| ||| || | |||| | ||||| || | ||| | Sbjct 883478 TTATGGTGCAGCAGTTCAAGCCGCTGTTTTGAGTGGAGACACTGACAGCAAGATTCAAGA 883537 Query 552290 TATTGTACTT---GTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTAT 552346 ||||||| || |||||||| || ||||| || || | ||||||| ||||| | Sbjct 883538 ---TGTACTTTTAGTGGATGTTACGCCACTATCCCTGGGCATCGAAACAGCCGGAGGCGT 883594 Query 552347 TATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTC 552406 ||||| || | || || |||||| | | |||||||| || | || | ||||| | Sbjct 883595 GATGACGAAGATCATTGAAAGAAATGCCAGAATTCCTTGCAAGCAGTCGCAAATATTTAC 883654 Query 552407 TACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATT 552466 || || || || || ||| | ||||| || || ||| | ||||| || |||||| | Sbjct 883655 CACCTACTCCGACAACCAACCGGCTGTAACCATCCAAGTCTTTGAGGGTGAAAGAGCCAT 883714 Query 552467 CACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCG 552526 || ||||| || |||| | || ||||| | || || |||||||| || ||||| Sbjct 883715 GACCAAAGACAACAATCTCTTGGGCACTTTCGACCTAACTGGCATTCCTCCAGCCCCTCG 883774 Query 552527 TGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTG 552584 |||||| || |||| ||||| |||||||| | ||||||||||| ||| | || ||| Sbjct 883775 TGGAGTCCCTAAAATCGAAGTCACTTTCGACCTAGATGCCAATGGTATTCTCAACGTG 883832 Score = 206 bits (228), Expect = 2e-47 Identities = 375/544 (69%), Gaps = 10/544 (2%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||||| || ||||||||| ||||||||||| |||||| |||| ||||| ||| Sbjct 889395 GGTATTGATTTGGGTACCACATATTCGTGTGTTGGTGTCTGGCAACATGGAAAAGTGGAA 889454 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || || ||||| || ||||| ||| | || || || ||||||| |||| || || || Sbjct 889455 ATCATCGCCAACGACCAAGGAAACCGCACAACCCCCAGTTATGTTGCTTTTACAGACACC 889514 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAA---GCCACTGGTAATCCTACCAATACT 550174 || | | || |||| || || ||||| | ||| |||| || || || | || ||| Sbjct 889515 GAGCGTCTACTTGGAGACGCCGCAAAGAACCAAGTTGCCA-TG--AACCCATCTAACACT 889571 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 | || || || ||||| |||||||| | | || ||||| | | | || |||| Sbjct 889572 GTCTTCGACGCAAAACGACTAATTGGACGCAAATTCGATGATCCCAAGATCCAACAAGAT 889631 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACT 550294 || || |||||||| || || | || || | ||||||||| | | ||| Sbjct 889632 ATCAAACATTGGCCGTTTAAAGTCGTCAACGACCATGGAAAACCAAAACTCCAAGTCGAA 889691 Query 550295 CATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAA 550354 || | || |||| || |||| ||| |||| || |||||||||| |||| Sbjct 889692 CACAAGGGCGAAACTAAAACGTTCGCACCTGAAGAAATCAGCTCCATGGTTTTAACGAAA 889751 Query 550355 ATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA--GTTACGGATGCAGTAATAACTG 550412 ||||| |||| || || | | |||| || || || | ||||| || | || | Sbjct 889752 ATGAAGGAAACTGCAGAGGCGTATCTTGG--AACAACTGTAAAAGATGCTGTTGTTACCG 889809 Query 550413 TACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTG 550472 | ||||| || || || || || ||| | ||||| |||||||| |||||| ||||||| Sbjct 889810 TTCCAGCCTACTTCAACGATTCCCAAAGGCAAGCCACTAAAGACGCTGGAGTGATTGCTG 889869 Query 550473 GACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTG 550532 | || ||||| | | ||||| || |||||||| || ||||| ||||| ||||| || | Sbjct 889870 GTCTAAATGTAATGAGAATTATTAACGAACCTACCGCAGCTGCCCTTGCTTATGGCCTGG 889929 Query 550533 ATAA 550536 | || Sbjct 889930 ACAA 889933 Score = 192 bits (212), Expect = 5e-43 Identities = 366/539 (68%), Gaps = 0/539 (0%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||||| || ||||||||| || || ||||| ||||| |||| ||||| ||| Sbjct 882387 GGTATCGATTTGGGCACCACATATTCCTGCGTCGGTGTCTGGCAGCATGGAAAAGTGGAA 882446 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || || || || || || || ||| |||| || || ||||||| | || ||||| || Sbjct 882447 ATCATCGCTAACGACCAGGGAAACCGAACAACACCCAGTTATGTTGCCTTTACGGACTCT 882506 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 || | | | |||| || || || || | |||| || |||||| |||| || || Sbjct 882507 GAGCGTCTCCTTGGGGACGCTGCCAAGAACCAAGTGGCTATGAATCCTTCCAACACCGTT 882566 Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237 ||||| || ||| | || |||||| | | | | | || ||| | || || || Sbjct 882567 TTTGACGCCAAAAGATTGATTGGACGCAAGTATGACGACCCGAAAATCCAACAGGACATC 882626 Query 550238 AAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCAT 550297 ||||| ||||| ||| || | || | | | || ||||| | || ||| || Sbjct 882627 AAGCACTGGCCATTCAAAGTGGTCAGCGACTGCGGCAAACCCAAGATCCAAGTCGAGCAC 882686 Query 550298 GAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATG 550357 |||| | ||| | ||| | || ||| || | || |||||||||| || ||| Sbjct 882687 AAAGGCGAAATCAAAAAGTTTGCTCCGGAAGAAGTCAGCTCCATGGTTTTAACAAAGATG 882746 Query 550358 AAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCA 550417 || ||||||| || | |||| ||| ||| || |||||||| || || || Sbjct 882747 AAGGAAACAGCGGAAGCGTACCTTGGACAATCCATTAAAGACGCAGTAATCACCGTTCCT 882806 Query 550418 GCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTT 550477 |||||||| || ||||| ||||| ||||| || ||||| || ||| ||| || ||| | Sbjct 882807 GCATATTTCAACGACTCTCAACGGCAAGCAACCAAAGACGCCGGAGTTATAGCAGGATTG 882866 Query 550478 AATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 |||||| | | || ||||||||||| || || ||||| | || |||||||| || || Sbjct 882867 AATGTTATGAGAATCATCAATGAACCCACCGCCGCTGCCTTAGCTTATGGACTGGACAA 882925 Score = 187 bits (206), Expect = 2e-41 Identities = 464/700 (66%), Gaps = 11/700 (2%) Strand=Plus/Minus Query 551890 CCAA-AGCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCT 551948 |||| ||| ||| | || |||||||| || ||| | ||||| || |||| || || Sbjct 871287 CCAAGAGCCCTTAGGCGACTAAGAACAGCGGCAGAACGCGCCAAGAGAACTCTGTCTTCA 871228 Query 551949 GGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCT 552008 ||||| || | || || ||| | || | |||| || || || |||| ||| || Sbjct 871227 AGTACTGAAGCAACCATCGAAATTGACGCTCTATTCGAAGGCATCGATTTC--TACACCA 871170 Query 552009 ATTTCGA--GGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAAC 552066 | || | || | ||| ||||| | | |||| | || ||| ||| || | | Sbjct 871169 AAGTCAGTCGAGCAAGATTCGAAGAATTGAATGCTGACTTATTCAGAGGAACTCTTCAGC 871110 Query 552067 CAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAA---TCCAAAGTACATGAAATTG 552123 | || ||| ||| | | ||| | || |||||| |||| | || || || | Sbjct 871109 CTGTTGAAAAAGCTCTGGCCGATGCCCGAATGGATAAAGGTTCCA---TCCACGACATCG 871053 Query 552124 TGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCA 552183 | | || || ||||| |||||||| || ||||| | | ||||| || |||| Sbjct 871052 TCTTGGTAGGAGGATCAACAAGAATCCCAAAAATCCAACATCTGTTACAAAACTACTTCA 870993 Query 552184 ATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAA 552243 |||| ||| || | ||| ||| ||||||||||||| ||||| || ||||| || ||| Sbjct 870992 ATGGAAAACAACTCAATCTCAGTATTAATCCAGATGAAGCTGTAGCTTATGGCGCAGCAG 870933 Query 552244 TTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAG 552303 |||| || ||| |||| ||| ||||||| || | || | | | || || | Sbjct 870932 TTCAGGCTGCTGTTCTAAGTGGTGAAACTGACAGCAAGATTCAGGACGTACTTCTGGTGG 870873 Query 552304 ATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCG 552363 ||||||| || ||||||||||| | ||||||| ||||| | ||||| || |||| | Sbjct 870872 ATGTTACGCCACTATCTCTTGGCATCGAAACAGCAGGAGGCGTGATGACGAAAATTATTG 870813 Query 552364 ATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATC 552423 | |||||| | | ||||| || | | |||||| || | || || | || || | Sbjct 870812 AAAGAAATGCGAGAATTCCCTGCAGACAATCTCAGACGTTCACAACATACGCCGACAACC 870753 Query 552424 AAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATC 552483 | | || || || |||||| | |||||||| ||||||| | || ||||| || || Sbjct 870752 AGCCAGCAGTAACCATTCAAGTATTTGAAGGTGAAAGAACCATGACAAAAGACAACAACT 870693 Query 552484 AACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTG 552543 | | || || || | || || |||||||| || || | ||||| || |||||| Sbjct 870692 TATTGGGAACCTTCGACTTGACTGGAATTCCTCCAGCACCAAGAGGAGTGCCCAAAATTG 870633 Query 552544 AAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGT 552583 | || || ||||| | ||||| ||||| ||| |||| || Sbjct 870632 ATGTCACCTTCGACCTGGATGCAAATGGTATTCTGAACGT 870593 Score = 165 bits (182), Expect = 7e-35 Identities = 384/574 (67%), Gaps = 4/574 (1%) Strand=Plus/Plus Query 552018 GCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAA 552077 |||| ||| ||||| | ||| ||||| || ||| ||| | | || || ||| | Sbjct 890274 GCCAGATTCGAAGAATTGAATTCCGATCTGTTCAGAGGAACTTTACAGCCGGTTGAAAAG 890333 Query 552078 GTT-TTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGG 552136 | ||||| ||| | || || |||||| | || |||| ||||| || || || || Sbjct 890334 GCACTTAAG-GATGCCAAAATGGATAAAGGCTCTGTGGATGACATTGTTCTAGTGGGAGG 890392 Query 552137 ATCTACAAGAATTCCTAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAAT 552195 ||||| || ||||| ||||||| | || | | ||| ||| | || ||| | Sbjct 890393 CTCTACCAGGATTCCGAAAATTCAACAGCTGCTGCAAAACTTCTTT-AGCGGCAAACCGT 890451 Query 552196 TAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTA 552255 |||| || | || || ||||||||||| |||||||| || || | ||||| || Sbjct 890452 TAAACCTCAGCATCAACCCTGATGAGGCTGTAGCCTATGGGGCTGCCGTGCAAGCTGCAG 890511 Query 552256 TTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTC 552315 || | |||| ||||||| || | || || | | ||||||||||| | || | Sbjct 890512 TTTTGAATGGAGAAACTGACTCGAAGATTCAGGATGTGTTGCTTGTAGATGTAGCGCCGC 890571 Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375 | ||| | ||| | ||||||| ||||| | ||||| || | ||||| |||||| | | Sbjct 890572 TGTCTTTGGGTATTGAAACAGCCGGAGGCGTAATGACGAAGATCATCGAAAGAAATTCGA 890631 Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435 ||||| || || | | | || | || || || || || ||| | ||||| | Sbjct 890632 GAATTCCATGCAAGCAGACCCAGACGTTCACCACCTACTCCGACAACCAACCGGCTGTAA 890691 Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495 | |||||| | ||||| || |||||| | || ||||| || |||| | || || | Sbjct 890692 CCATTCAAGTATTTGAGGGCGAAAGAGCCATGACCAAAGACAACAATCTCTTGGGCACGT 890751 Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555 | | || || |||||||| || |||||||| || || |||| |||||||| |||| Sbjct 890752 TCGACCTAACTGGCATTCCTCCGGCCCCTCGTGGTGTTCCTAAAATCGAAGTTACCTTCG 890811 Query 552556 ATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 |||| || || ||||| || | ||||| |||| Sbjct 890812 ATATGGACGCTAATGGCATCCTAAATGTTTCTGC 890845 >seq6955 Length=469295 Score = 113 bits (124), Expect = 4e-19 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||||| | ||||| ||||| | ||||||||| || ||||| ||||| Sbjct 95277 ATGTTGTAATCAGACAAAGTTCGGCCGTCTTCCAATTGTTTTCCTGCGAAAATCAGTCTC 95218 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || || || || |||||||||||||| || || || || ||| || ||||| ||| Sbjct 95217 TGTTGGTCTGGGGGAATTCCTTCTTTGTCCTGGATCTTGGCTTTAACATTTTCAATAGTA 95158 Query 563413 TCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGC 563472 |||| | ||| || |||| ||||| |||||||||||||| || ||||||||| Sbjct 95157 TCAGAAGGCTCGACTTCAAGTGTAATGGTTTTTCCAGTAAGAGTTTTGACAAAAATTTGC 95098 Query 563473 AT 563474 || Sbjct 95097 AT 95096 Score = 104 bits (114), Expect = 2e-16 Identities = 139/190 (73%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| || || ||||| | ||| || | |||||| | |||||| || || ||||| Sbjct 95966 TTTGG--ATGTTATAATCTGATAGGGTGCGGCCATCTTCCAATTGTTTGCCTGCGAAAAT 95909 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 ||||| || || || |||||||||||||| || || || || ||| || || || Sbjct 95908 CAGTCTCTGTTGGTCTGGAGGAATTCCTTCCTTGTCCTGGATCTTTGCCTTAACATTTTC 95849 Query 563406 AATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 || ||||||| || || ||| || |||| |||||| ||||| ||||||||||| | Sbjct 95848 GATGGTATCAGATGGTTCGAC-TTCAAGTGTAATAGTTTTGCCAGTCAGAGTTTTAACAA 95790 Query 563465 AAATTTGCAT 563474 |||| ||||| Sbjct 95789 AAATCTGCAT 95780 Score = 102 bits (112), Expect = 7e-16 Identities = 134/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || ||||| |||| | || | | |||||| | ||||| ||||||||||| | || Sbjct 94821 ATGTTGTAGTCAGACAATGTACGTCCATCTTCTAACTGTTTGCCGGCAAAAATTAACCTC 94762 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || || || |||||||||||||| || || ||||| || ||| || ||||| ||| Sbjct 94761 TGTTGGTCTGGAGGAATTCCTTCCTTGTCCTGAATCTTGGCTTTAACATTTTCAATGGTA 94702 Query 563413 TCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| || || ||| || |||| ||||| |||||||| ||||| || |||||||| Sbjct 94701 TCAGATGGTTCGAC-TTCAAGTGTAATTGTTTTGCCAGTAAGGGTTTTTACAAAAATTTG 94643 Query 563472 CAT 563474 ||| Sbjct 94642 CAT 94640 Score = 93.3 bits (102), Expect = 3e-13 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||| | || ||| | ||||| | |||||| || || ||||| | || Sbjct 95733 ATGTTGTAATCCGATAAAGTGCGGCCGTCTTCCAATTGTTTGCCTGCGAAAATCAACCTC 95674 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 ||||| || |||||||| |||||||| || || || || ||| || ||| || || Sbjct 95673 TGCTGGTCTGGAGGAATGCCTTCTTTGTCCTGGATCTTAGCTTTAACATTCTCGATGGTG 95614 Query 563413 TCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 || | | | | || ||| | ||| | |||||| ||||| || ||||| ||||||||||| Sbjct 95613 TCTGAGGGT-TCCACTTCCAAAGTGATAGTTTTTCCAGTCAGGGTTTTCACGAAAATTTG 95555 Query 563472 CAT 563474 ||| Sbjct 95554 CAT 95552 >seq7387 Length=2571978 Score = 104 bits (114), Expect = 2e-16 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 394007 GTCACAATTTCATCAAATGTTAAATTCATTGCAATAATTTGTGGTAGTCCCACTTCATTA 394066 || ||||||||| |||||| | ||| ||| ||| || ||||| ||| |||| || | Sbjct 627558 GTAACAATTTCAGGAAATGTCATATTTTGTGCGATACTTCTTGGTACTCCTACTTGATCA 627617 Query 394067 AGAGCAATATTTGGATCCGAGGTAATAACTGTACGACCTGACATATCCACACGTTTTCCC 394126 | | | ||||||||| | || || || ||||| | || | || |||||||||||| Sbjct 627618 ATACGTAGATTTGGATCTGGCGTGATCACGGTACGTGCAGAAAAGTCTACACGTTTTCCC 627677 Query 394127 ATAAGATTTCCACGAATTCTACCTTCTTTACC 394158 ||||| ||||| |||||||| |||||||| || Sbjct 627678 ATAAGGTTTCCTCGAATTCTTCCTTCTTTTCC 627709 >seq7320 Length=937134 Score = 104 bits (114), Expect = 2e-16 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 550382 GGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGT 550441 ||| || ||| || | || || || || || ||||| ||||| |||||||| |||||| Sbjct 231413 GGTAAATCAGTCACCAACGCTGTTATTACAGTGCCAGCTTATTTCAATGACTCTCAACGT 231354 Query 550442 CAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAA 550501 ||||| || || || ||||| ||| | || ||| | ||||| | || ||||||||| Sbjct 231353 CAAGCAACAAAGGACTCTGGAACTATCTCAGGTCTTCAGGTTCTCAGAATCATCAATGAA 231294 Query 550502 CCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 || ||||| || ||| |||| ||||| ||||| || Sbjct 231293 CCAACTGCGGCCGCAATTGCGTATGGTCTTGACAA 231259 Score = 98.7 bits (108), Expect = 8e-15 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| |||| || ||| | || || || || |||||||| || | ||| | || || Sbjct 231939 AGCTGTAGGAATCGATCTTGGCACAACTTACTCATGTGTTGGCGTCTTCCAACACGGAAA 231880 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 |||||||| ||||||||||| || ||||||||||| || || || |||||| | ||||| Sbjct 231879 GGTTGAAATCATTGCCAATGACCAGGGTAACAGAACGACGCCCTCATATGTTGCCTTCAC 231820 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAA---GCCACTGGTAATCCTAC 550167 || || || | | | |||| ||||| || || | ||| |||| || || || | Sbjct 231819 AGATACGGAGCGTCTGATTGGGGATGCTGCCAAGAACCAAGTGGCCA-TG--AACCCCAA 231763 Query 550168 CAATACTATTTTTG 550181 ||| || ||||||| Sbjct 231762 CAACACAATTTTTG 231749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028862981632120