Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_017975.1 Length=167292 Score E Sequences producing significant alignments: (Bits) Value seq2768 109 6e-19 >seq2768 Length=8677 Score = 109 bits (120), Expect = 6e-19 Identities = 207/305 (68%), Gaps = 0/305 (0%) Strand=Plus/Minus Query 97130 CCCATATCATCTTCGCCGCGACGAGACTCGTTAGCTAACCACGCTTCATTTAAGTTAGCA 97189 |||||||||||||| || |||| | |||||||||||| ||| ||||| ||||||| Sbjct 1423 CCCATATCATCTTCACCTTTACGATAAGGGTTAGCTAACCAAGCTCCATTTTCGTTAGCA 1364 Query 97190 TTAGCATCCCAAGTTTTAGTTCCTAACTTACGGAAGTCTTCTGCGTTAGTGTAACCACGA 97249 || |||| |||||| ||| || | ||||| | | || || || ||||| Sbjct 1363 TTTGCATTCCAAGTATTACAGCCAATGGCTCGGAACTGAGCAGCATTGTCATATCCACGC 1304 Query 97250 ATGTAACCTAGTAGTTCGGCTACGGCTGCTTTCCAATAACTCTTACGTGTAGTAAGCATC 97309 | ||| |||| ||| || || | ||||| ||||| ||||| || || || |||| | Sbjct 1303 AAGTAGCCTAATAGCTCAGCAATAGCTGCCTTCCAGTAACTTTTTCGGGTCGTAACTAAG 1244 Query 97310 GGTAGTATACCTGCTTCAACATCATATTCCATGTTAGCACGTATAACAGTTAGGCAACGT 97369 || | | | || | || | || || | | |||| ||||| |||| ||||| Sbjct 1243 GGGAATTCATTCGCCCCTACGTGGTACTCTAAATCAGCATTAATAACGGTTAAACAACGC 1184 Query 97370 TTACCTGTACGTTCATTATATACCCATTCACCTTCTTCTACAATACGACGACCTAAGTCT 97429 || || || || ||||| | |||||| | ||||| || || || || ||| || ||| Sbjct 1183 TTTCCAGTTCGCTCATTTTCAACCCATACGCCTTCATCAACTATGCGTTGACACAAATCT 1124 Query 97430 AAATA 97434 | ||| Sbjct 1123 AGATA 1119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535151621624960