Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq7506 89.7 7e-13 >seq7506 Length=1784414 Score = 89.7 bits (98), Expect = 7e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 197088 GTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCC 197147 ||| ||||| || | ||| |||| || || ||||||| ||| ||| || | | || Sbjct 667094 GTAGCAGGCCAGCAGGAATCCGCCATAAGTGCCCGTTCGCTTGCCCTTGCCCAAGTACCC 667153 Query 197148 TCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGTTT 197207 || || ||||||| |||| || |||| || || |||| ||| || || ||||| || Sbjct 667154 CCCAATCACCACCACGTCCAATGTATCGCCTACGCCCTCCAAGTAGTCCTTTTTCAGCTT 667213 Query 197208 GAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGAT 197267 ||||| | | |||| ||||| || ||||| || || | ||||||||||| | Sbjct 667214 CAGCCAATTGCGCGATCGTTTGGCGATTTCGTACGTGGCATCCTGCTCCAGGGTCTTCAC 667273 Query 197268 CATCAATCCCTCGCAAT 197284 ||| | |||||||||| Sbjct 667274 CATTAGACCCTCGCAAT 667290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676660336725440