Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq7319 269 2e-66 seq7320 122 6e-22 seq6955 120 2e-21 seq7387 107 1e-17 seq7010 95.1 8e-14 seq5761 95.1 8e-14 seq7641 91.5 1e-12 >seq7319 Length=1095930 Score = 269 bits (298), Expect = 2e-66 Identities = 392/551 (71%), Gaps = 2/551 (0%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| | ||||||||||| || || || || ||||| | ||| |||||| |||| || Sbjct 889388 TGCAGTGGGTATTGATTTGGGTACCACATATTCGTGTGTTGGTGTCTGGCAACATGGAAA 889447 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| ||||| || ||||| |||||||| || | ||||| || |||||| ||||||| Sbjct 889448 AGTGGAAATCATCGCCAACGACCAAGGAAACCGCACAACCCCCAGTTATGTTGCTTTTAC 889507 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 || || || | ||| ||||||| || || || | |||| ||| || || ||| Sbjct 889508 AGACACCGAGCGTCTACTTGGAGACGCCGCAAAGAACCAAGTTGCCATGAACCCATCTAA 889567 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 ||| | || || || ||| || | ||||| || || || |||||| ||| ||||| Sbjct 889568 CACTGTCTTCGACGCAAAACGACTAATTGGACGCAAATTCGATGATCCCAAGATCCAACA 889627 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC 474627 ||||| |||||||| ||||| || | || | ||| |||||| | | ||| Sbjct 889628 AGATATCAAACATTGGCCGTTTAAAGTCGTCAACGACCATGGAAAACCAAAACTCCAAGT 889687 Query 474628 AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 |||| || ||||||||| || |||| ||| |||| || ||||||||| | Sbjct 889688 CGAACACAAGGGCGAAACTAAAACGTTCGCACCTGAAGAAATCAGCTCCATGGTTTTAAC 889747 Query 474688 CAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTA 474746 |||||||| |||| || ||| | ||||||||| | |||| ||||| || ||| Sbjct 889748 GAAAATGAAGGAAACTGCAGAG-GCGTATCTTGGAACAACTGTAAAAGATGCTGTTGTTA 889806 Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806 | |||||||| || || || ||||| ||| | ||||| |||||||| || ||| |||| Sbjct 889807 CCGTTCCAGCCTACTTCAACGATTCCCAAAGGCAAGCCACTAAAGACGCTGGAGTGATTG 889866 Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTC 474866 | ||||| ||||| | | |||||||| ||||| || ||||| || ||||||||||| | Sbjct 889867 CTGGTCTAAATGTAATGAGAATTATTAACGAACCTACCGCAGCTGCCCTTGCTTATGGCC 889926 Query 474867 TTGATAAGAAT 474877 | || |||||| Sbjct 889927 TGGACAAGAAT 889937 Score = 223 bits (246), Expect = 2e-52 Identities = 378/548 (69%), Gaps = 0/548 (0%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||| ||||||| ||||| || || || || || || | ||| ||||| |||| ||| Sbjct 882381 GCAGTTGGTATCGATTTGGGCACCACATATTCCTGCGTCGGTGTCTGGCAGCATGGAAAA 882440 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| || || || ||||| || || |||||||||| |||||| | ||||| Sbjct 882441 GTGGAAATCATCGCTAACGACCAGGGAAACCGAACAACACCCAGTTATGTTGCCTTTACG 882500 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || |||| | ||| |||| || ||||| || | |||| || |||||| || Sbjct 882501 GACTCTGAGCGTCTCCTTGGGGACGCTGCCAAGAACCAAGTGGCTATGAATCCTTCCAAC 882560 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || ||||||| || |||||||||||||| || || | ||| || | | ||||| Sbjct 882561 ACCGTTTTTGACGCCAAAAGATTGATTGGACGCAAGTATGACGACCCGAAAATCCAACAG 882620 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCA 474628 || || || ||||| || || ||| | | | | || ||||| | || ||| Sbjct 882621 GACATCAAGCACTGGCCATTCAAAGTGGTCAGCGACTGCGGCAAACCCAAGATCCAAGTC 882680 Query 474629 ATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCC 474688 ||| ||| |||| ||| | ||| | |||||| || | || ||||||||| | Sbjct 882681 GAGCACAAAGGCGAAATCAAAAAGTTTGCTCCGGAAGAAGTCAGCTCCATGGTTTTAACA 882740 Query 474689 AAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 || ||||| |||| ||| | || ||||||||| | | || |||||||| || Sbjct 882741 AAGATGAAGGAAACAGCGGAAGCGTACCTTGGACAATCCATTAAAGACGCAGTAATCACC 882800 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 ||||| |||||||| || || |||||||| |||||||| ||||| || ||| || ||| Sbjct 882801 GTTCCTGCATATTTCAACGACTCTCAACGGCAAGCAACCAAAGACGCCGGAGTTATAGCA 882860 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTT 474868 || | |||||| | | || || |||||||| || || || || | |||||||| || Sbjct 882861 GGATTGAATGTTATGAGAATCATCAATGAACCCACCGCCGCTGCCTTAGCTTATGGACTG 882920 Query 474869 GATAAGAA 474876 || ||||| Sbjct 882921 GACAAGAA 882928 Score = 221 bits (244), Expect = 8e-52 Identities = 549/817 (67%), Gaps = 16/817 (2%) Strand=Plus/Plus Query 475358 GTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT- 475416 || ||| | |||||||| || | ||| | || || ||||| ||||| || ||| | || Sbjct 883023 GTCAGATCCACAGCTGGTGACACCCATTTGGGCGGAGAAGACTTTGACAACAGATTAGTC 883082 Query 475417 ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTT-GATCTTT-CAACATCTGCT 475474 | | || | ||||| |||||||| |||| | ||| |||||| | || | | Sbjct 883083 AACCACTTG-GCCGAAGAATTCAAGAG-AAAATTCAAGAAAGATCTTCGCTCCAACC-CA 883139 Query 475475 AAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCT 475534 | ||| || || | || ||||| || ||||| || ||| || |||| ||||| | Sbjct 883140 AGAGCTTTGAGGAGACTGAGAACGGCAGCAGAACGCGCCAAGAGAACTCTCTCTTCAAGT 883199 Query 475535 ACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATT 475594 ||| || | || ||||| |||| |||| || ||||| | || | | || || Sbjct 883200 ACTGAAGCAACCATTGAAATTGACGCTCTATTCGAAGGCGTCGACTTCTACACCAAAGTT 883259 Query 475595 ACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTT 475654 || | || | ||| ||||| | | | || | || ||| ||| | | ||||| Sbjct 883260 ACTCGAGCAAGATTCGAAGAACTAAATGCCGACTTATTCAGAGGAACCCTCCAGCCCGTG 883319 Query 475655 GAACAAGTTCTCAGAGATTCTAAACTTGACAAAT-CACAAGTCCATGAAATTGTTCTTGT 475713 ||| ||| ||| || | ||| | || ||| | | | ||||||| ||||| || || Sbjct 883320 GAAAAAGCTCTAGCTGACGCCAAAATGGATAAAGGCTCCA-TCCATGACATTGTCCTGGT 883378 Query 475714 AGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTA 475772 ||||| || |||||||||||||||||| | || || || || | | || ||||| | Sbjct 883379 GGGAGGATCGACAAGAATTCCAAAAATACAACAACTG-TTGCAAAACTTCTTCAATGGAA 883437 Query 475773 AAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAG 475832 || | | ||| ||| | ||||| ||||||||||| || ||||| || || || |||| Sbjct 883438 AACAACTCAATCTCAGTATTAATCCAGATGAAGCTGTAGCTTATGGTGCAGCAGTTCAAG 883497 Query 475833 CAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTT---GTTGACG 475889 | ||| |||| || | | ||| || || | | | ||||||| || || | Sbjct 883498 CCGCTGTTTTGAGTGGAGACACTGAC-AGCAAG--ATTCAAGATGTACTTTTAGTGGATG 883554 Query 475890 TAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACA 475949 | || ||||| || | || | ||||||| ||||| | ||||| || | ||||| | Sbjct 883555 TTACGCCACTATCCCTGGGCATCGAAACAGCCGGAGGCGTGATGACGAAGATCATTGAAA 883614 Query 475950 GAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAA 476009 ||||| | || || ||||| | || || ||||| |||| || || || || ||| Sbjct 883615 GAAATGCCAGAATTCCTTGCAAGCAGTCGCAAATATTTACCACCTACTCCGACAACCAAC 883674 Query 476010 CAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAAC 476069 | |||||||||||||| ||||||| ||||||||| | || ||||| || || Sbjct 883675 CGGCTGTAACCATCCAAGTCTTTGAGGGTGAAAGAGCCATGACCAAAGACAACAATCTCT 883734 Query 476070 TTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAG 476129 | || ||||| | || || |||||||| || || | ||||| ||| |||| |||| Sbjct 883735 TGGGCACTTTCGACCTAACTGGCATTCCTCCAGCCCCTCGTGGAGTCCCTAAAATCGAAG 883794 Query 476130 TTACTTTTGATATTGATGCAAATGGTATTCTTAATGT 476166 | ||||| || | ||||| ||||||||||| || || Sbjct 883795 TCACTTTCGACCTAGATGCCAATGGTATTCTCAACGT 883831 Score = 217 bits (240), Expect = 1e-50 Identities = 551/824 (67%), Gaps = 28/824 (3%) Strand=Plus/Minus Query 475358 GTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTA 475417 || ||||| ||||| || || | ||||| || || ||||| ||||| || ||| | ||| Sbjct 871401 GTCAGAGCTACAGCAGGTGACACCCATCTGGGCGGAGAAGACTTTGACAACAGATTAGTA 871342 Query 475418 T----CATGGTGTGTTGAAGATTTCAAGAGGAAA---AATAAAGTTGATCTTTCAACATC 475470 | ||| | ||||| |||||||||||| | |||| | || |||| ||| Sbjct 871341 AACCACTTGGCG----GAAGAATTCAAGAGGAAATTCAGGAAAGATCTTCGATCAA-ATC 871287 Query 475471 TGCTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTC 475530 | | ||| | || || || ||||| || ||||| || ||| || |||| ||||| Sbjct 871286 --CAAGAGCCCTTAGGCGACTAAGAACAGCGGCAGAACGCGCCAAGAGAACTCTGTCTTC 871229 Query 475531 TGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCT 475590 |||| || | || | ||| |||| |||| || ||||| || |||| | || Sbjct 871228 AAGTACTGAAGCAACCATCGAAATTGACGCTCTATTCGAAGGCATCGATTTCTACACCAA 871169 Query 475591 TATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACC 475650 | | | || | ||| ||||| | | |||| | || ||| ||| || | || Sbjct 871168 AGTCAGTCGAGCAAGATTCGAAGAATTGAATGCTGACTTATTCAGAGGAACTCTTCAGCC 871109 Query 475651 CGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAA--TCACAAGTCCATGAAATTGTT 475708 |||||| ||| ||| ||| | | | || ||| | || |||| || || || Sbjct 871108 TGTTGAAAAAGCTCTGGCCGATGCCCGAATGGATAAAGGTTCCA--TCCACGACATCGTC 871051 Query 475709 CTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCA-TATTTTAA 475767 | |||||||| ||||||||||| |||||||| | | || || || | || || || Sbjct 871050 TTGGTAGGAGGATCAACAAGAATCCCAAAAATCCAACATCTG-TTACAAAACTACTTCAA 870992 Query 475768 TGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGT 475827 ||| ||| | | ||| ||| | ||||| ||||||||||| || ||||| || || || Sbjct 870991 TGGAAAACAACTCAATCTCAGTATTAATCCAGATGAAGCTGTAGCTTATGGCGCAGCAGT 870932 Query 475828 CCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTT---GT 475884 || || ||| || || ||| || | ||| || || | | | |||||| || Sbjct 870931 TCAGGCTGCTGTTCTAAGTGGTGAAACTGAC-AGCAAG--ATTCAGGACGTACTTCTGGT 870875 Query 475885 TGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTAT 475944 || || || ||||| || | || | ||||||| ||||| | ||||| || |||| Sbjct 870874 GGATGTTACGCCACTATCTCTTGGCATCGAAACAGCAGGAGGCGTGATGACGAAAATTAT 870815 Query 475945 TGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAA 476004 ||| |||||| | || || |||| | |||| | || | || || | || || Sbjct 870814 TGAAAGAAATGCGAGAATTCCCTGCAGACAATCTCAGACGTTCACAACATACGCCGACAA 870755 Query 476005 TCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAA 476064 || || | |||||||| ||| | |||||||||||||||| | || ||||| || || Sbjct 870754 CCAGCCAGCAGTAACCATTCAAGTATTTGAAGGTGAAAGAACCATGACAAAAGACAACAA 870695 Query 476065 CAAACTTGGAACTTTTAATCTTGAA-GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAA 476123 | | | ||||| || | ||||| || |||||||| || || |||||||| || ||| Sbjct 870694 CTTATTGGGAACCTTCGA-CTTGACTGGAATTCCTCCAGCACCAAGAGGAGTGCCCAAAA 870636 Query 476124 TTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTT 476167 |||| || || || || | ||||||||||||||||| || ||| Sbjct 870635 TTGATGTCACCTTCGACCTGGATGCAAATGGTATTCTGAACGTT 870592 Score = 105 bits (116), Expect = 4e-17 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||||||||||||||||| || || || || ||| || | ||| ||||| |||| ||| Sbjct 872043 GCAATTGGTATTGATTTGGGCACGACGTATTCTTGCGTTGGTGTCTGGCAGCATGGAAAA 871984 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| || || || ||||| || || |||||||||| |||||| | ||||| Sbjct 871983 GTGGAAATCATCGCTAACGACCAGGGAAACCGAACAACACCCAGTTATGTTGCCTTTACG 871924 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || |||| | ||| |||| || ||||| || | |||| || |||||| || Sbjct 871923 GACTCTGAGCGTCTCCTTGGGGACGCTGCCAAGAACCAAGTGGCTATGAATCCTTCCAAC 871864 Query 474509 ACTATTTTTGATG 474521 || ||||||||| Sbjct 871863 ACCGTTTTTGATG 871851 Score = 102 bits (112), Expect = 5e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||||||||||||||||| || || || || ||| || | ||| ||||| |||| ||| Sbjct 879155 GCAATTGGTATTGATTTGGGCACGACGTATTCTTGCGTTGGTGTCTGGCAGCATGGAAAA 879096 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| || || || ||||| || || |||||||||| |||||| | ||||| Sbjct 879095 GTGGAAATCATCGCTAACGACCAGGGAAACCGAACAACACCCAGTTATGTTGCCTTTACG 879036 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || |||| | ||| |||| || ||||| || | |||| || |||||| || Sbjct 879035 GACTCTGAGCGTCTCCTTGGGGACGCTGCCAAGAACCAAGTGGCTATGAATCCTTCCAAC 878976 Query 474509 ACTATTTTTGA 474519 || ||||||| Sbjct 878975 ACCGTTTTTGA 878965 >seq7320 Length=937134 Score = 122 bits (134), Expect = 6e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 || || ||||| || ||||| ||||| ||||| ||||||||||||||||| || || | Sbjct 231395 GCTGTTATTACAGTGCCAGCTTATTTCAATGACTCTCAACGTCAAGCAACAAAGGACTCT 231336 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856 |||| || |||||||| | ||| | | || || ||||||||||| || |||||| || Sbjct 231335 GGAACTATCTCAGGTCTTCAGGTTCTCAGAATCATCAATGAACCAACTGCGGCCGCAATT 231276 Query 474857 GCTTATGGTCTTGATAAGAA 474876 || ||||||||||| ||||| Sbjct 231275 GCGTATGGTCTTGACAAGAA 231256 Score = 98.7 bits (108), Expect = 6e-15 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 474335 GGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAA 474394 || || ||| | || || |||||| ||||| | || | ||| | || || || ||| Sbjct 231932 GGAATCGATCTTGGCACAACTTACTCATGTGTTGGCGTCTTCCAACACGGAAAGGTTGAA 231873 Query 474395 ATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACT 474454 || |||||||||||||| ||||| ||||| || || ||||||||| | || || || || Sbjct 231872 ATCATTGCCAATGACCAGGGTAACAGAACGACGCCCTCATATGTTGCCTTCACAGATACG 231813 Query 474455 GAACATCTTATTGGAGATGCTGCTAAATATCAAG 474488 || | ||| ||||| |||||||| || | |||| Sbjct 231812 GAGCGTCTGATTGGGGATGCTGCCAAGAACCAAG 231779 Score = 87.8 bits (96), Expect = 1e-11 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 290823 CAAGACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGAC 290882 |||||||||| | | || || || ||||||||||| || ||||| | || | ||||| Sbjct 231263 CAAGACCATACGCAATTGCGGCCGCAGTTGGTTCATTGATGATTCTGAGAACCTGAAGAC 231322 Query 290883 CTGCAATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGA 290942 ||| || || | || || ||||| || ||||| | ||||| |||||||| || | Sbjct 231323 CTGAGATAGTTCCAGAGTCCTTTGTTGCTTGACGTTGAGAGTCATTGAAATAAGCTGGCA 231382 Query 290943 CTGTAATAACAGCTTT 290958 ||||||||||||| || Sbjct 231383 CTGTAATAACAGCGTT 231398 >seq6955 Length=469295 Score = 120 bits (132), Expect = 2e-21 Identities = 132/176 (75%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 |||||||| | ||| || | | |||||| | ||| || || || ||||| || | ||| Sbjct 95958 TTATAATCTGATAGGGTGCGGCCATCTTCCAATTGTTTGCCTGCGAAAATCAGTCTCTGT 95899 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || |||||||||||||||||||| || |||||| || ||| ||| || |||||| Sbjct 95898 TGGTCTGGAGGAATTCCTTCCTTGTCCTGGATCTTTGCCTTAACATTTTCGATGGTATCA 95839 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || |||||| ||||||||||| || || ||||| ||||| ||||| || Sbjct 95838 GATGGTTCGACTTCAAGTGTAATAGTTTTGCCAGTCAGAGTTTTAACAAAAATCTG 95783 Score = 114 bits (126), Expect = 8e-20 Identities = 131/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 |||||||| | ||| || | | |||||| | || || ||||| ||||| | |||||| Sbjct 94590 TTATAATCTGATAGGGTGCGGCCATCTTCCAACTGTTTGCCAGCGAAAATCAATCGTTGT 94531 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || || |||||||||||||||||||||||||| ||| || |||||||| || Sbjct 94530 TGGTCTGGGGGAATTCCTTCCTTGTCTTGAATCTTGGCTTTAACGTTCTCAATAGTGTCT 94471 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||||| || |||||||| || || | |||||| |||||||| || Sbjct 94470 GATGGTTCAACCTCAAGTGTGATAGTTTTGCCAGTCAAAGTCTTCACGAAAATCTG 94415 Score = 111 bits (122), Expect = 1e-18 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||||| | ||||| | ||||| | ||| ||||| || ||||| || | ||| Sbjct 95274 TTGTAATCAGACAAAGTTCGGCCGTCTTCCAATTGTTTTCCTGCGAAAATCAGTCTCTGT 95215 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || || ||||||||||| ||||| || ||||| ||| ||| ||||||||||||| Sbjct 95214 TGGTCTGGGGGAATTCCTTCTTTGTCCTGGATCTTGGCTTTAACATTTTCAATAGTATCA 95155 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | |||||| ||||| ||||| || || ||||| || || |||||||| Sbjct 95154 GAAGGCTCGACTTCAAGTGTAATGGTTTTTCCAGTAAGAGTTTTGACAAAAATTTG 95099 Score = 105 bits (116), Expect = 4e-17 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| | || || || |||||||| | | ||||| || ||||||||||||||||| Sbjct 94795 ATCTTCTAACTGTTTGCCGGCAAAAATTAACCTCTGTTGGTCTGGAGGAATTCCTTCCTT 94736 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| |||||||| ||| ||| |||||| ||||||| || |||||| ||||| Sbjct 94735 GTCCTGAATCTTGGCTTTAACATTTTCAATGGTATCAGATGGTTCGACTTCAAGTGTAAT 94676 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || || || |||||||| Sbjct 94675 TGTTTTGCCAGTAAGGGTTTTTACAAAAATTTG 94643 >seq7387 Length=2571978 Score = 107 bits (118), Expect = 1e-17 Identities = 117/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 321759 GTAACAATTTCATCAAATGTAAGATTTTTTGCAATAATTAATGGTAAACCAACTTCATTC 321818 |||||||||||| |||||| | ||||| ||| ||| || ||||| || |||| | || Sbjct 627558 GTAACAATTTCAGGAAATGTCATATTTTGTGCGATACTTCTTGGTACTCCTACTTGA-TC 627616 Query 321819 AGTGC-AATATTTGGATCAGATGTGATAACTGTACGACCAGACATATCAACACGTTTACC 321877 | | | | ||||||||| | ||||| || ||||| |||| | || |||||||| || Sbjct 627617 AATACGTAGATTTGGATCTGGCGTGATCACGGTACGTGCAGAAAAGTCTACACGTTTTCC 627676 Query 321878 CATAAGATTTCCTCTAATACGACCTTCTTTTCC 321910 |||||| ||||||| ||| | ||||||||||| Sbjct 627677 CATAAGGTTTCCTCGAATTCTTCCTTCTTTTCC 627709 >seq7010 Length=35453 Score = 95.1 bits (104), Expect = 8e-14 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| | ||||| ||||| || || | ||| || ||||| ||||| || |||||||| Sbjct 8751 ATCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGATCGGGAGGTATGCCTTCCTT 8810 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735 ||| ||||| || ||| ||| ||| || || || | || | | |||||||| | Sbjct 8811 GTCCTGAATTTTCGCTTTTACATTTTCGATGGTGTCTGATGGCTCGA-CCTCAAGGGTGA 8869 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || ||||| |||||||| || ||||||||||| Sbjct 8870 TGGTCTTACCAGTGAGAGTTTTCACGAAAATTTG 8903 >seq5761 Length=8615 Score = 95.1 bits (104), Expect = 8e-14 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| | ||||| ||||| || || | ||| || ||||| ||||| || |||||||| Sbjct 254 ATCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGATCGGGAGGTATGCCTTCCTT 195 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735 ||| ||||| || ||| ||| ||| || || || | || | | |||||||| | Sbjct 194 GTCCTGAATTTTCGCTTTTACATTTTCGATGGTGTCTGATGGCTCGA-CCTCAAGGGTGA 136 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || ||||| |||||||| || ||||||||||| Sbjct 135 TGGTCTTACCAGTGAGAGTTTTCACGAAAATTTG 102 >seq7641 Length=1756407 Score = 91.5 bits (100), Expect = 1e-12 Identities = 130/178 (73%), Gaps = 4/178 (2%) Strand=Plus/Minus Query 474636 CAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGA 474695 |||||||||| ||| ||| | || ||| | || ||| |||||||| | ||||||| Sbjct 1564112 CAGGTGAAACGAAAACCTTTGCTCCTGAAGAGATCAGTTCCATGGTTTTGACGAAAATGA 1564053 Query 474696 AACAAACCGC-GAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGTAATTACTGTTCC 474753 | | || || ||| ||||| |||| |||| | ||||||| || ||||| ||||| Sbjct 1564052 AGGACACAGCTGAGG-CATAT-TTGGGGAAGAGTGCTTCTGATGCCGTTATTACCGTTCC 1563995 Query 474754 AGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGT 474811 ||||||||||| || ||| | ||||| ||||||||||| |||| || || ||| Sbjct 1563994 GGCATATTTTAACGACAGCCAAAGACAAGCTACTAAAGATGCCGGAACTATCGCTGGT 1563937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267827976951824