Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq7387 105 2e-17 >seq7387 Length=2571978 Score = 105 bits (116), Expect = 2e-17 Identities = 205/303 (68%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| ||| || | |||||| ||||||||||| || | || |||||||||||| Sbjct 626025 TCCATAGCCTTTATCAGACGACGTTGAATATAACCTGTCTCGGCGGTCTTTACAGCTGTA 626084 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694 ||||| | ||| ||||||| ||||| || || || | | ||| || || || Sbjct 626085 TCAATCAAACCTTCACGACCTCCCATGGCGTGAAAATAGAACTCGGAAGGAGTTAATCCG 626144 Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAG 302754 ||| | | || |||| ||||| || || || || || ||| || | || Sbjct 626145 GCAAGATATGAATTCTCTACGAACCCTTTCGATTCAGGTCCATAATCGTCTTTAATGAAA 626204 Query 302755 TGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGT 302814 || ||||| | || ||| |||| |||| ||||| ||||| || |||||||||||| Sbjct 626205 TGCGGCAGACTTCTCTTCCTGAAGCCAAATGGAATACGTTTTCCTTCTACGTTCTGCTGT 626264 Query 302815 CCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAGCATTTACC 302874 || | || | ||| | ||| || ||||| | || | |||||||| || | | ||| Sbjct 626265 CCTACACAAGCAATAACCTGTGATATATTAATATTAGATCCCTTGGAACCCGAAACGACC 626324 Query 302875 ATA 302877 ||| Sbjct 626325 ATA 626327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471663193455356