Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_021529.2 Length=247511 Score E Sequences producing significant alignments: (Bits) Value seq2699 87.8 3e-12 >seq2699 Length=13915 Score = 87.8 bits (96), Expect = 3e-12 Identities = 113/152 (74%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 95896 TTGGCGCTTCATGTTGGGCTCGAACCAACGACTCACGGATTAACAGTCCGTCACTCTACC 95955 ||||| |||| ||||||||||||| ||| ||||||||||||||||| ||||||| Sbjct 13549 TTGGCTCTTCCACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACC 13490 Query 95956 GACTGAGTTAATGAAGCAAATATGGC-GACGAAGGAGAATTTCGAAATCTCGACCTGCGG 96014 ||||||| || |||| | ||||||| | || | ||||| ||||||||| Sbjct 13489 GACTGAGCTATGGAAGAATATATGGCTCTCCAACCTG-GGCTCGAACCAGGGACCTGCGG 13431 Query 96015 GTTAACAGCCCGCTGCTCTGCC-TCTGAGCTA 96045 ||||||| ||| ||||| || |||||||| Sbjct 13430 ATTAACAGTCCGTCGCTCTACCGACTGAGCTA 13399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 791826148298080