Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_022323.1 Length=136910 Score E Sequences producing significant alignments: (Bits) Value seq2064 118 9e-22 >seq2064 Length=2520 Score = 118 bits (130), Expect = 9e-22 Identities = 146/199 (73%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 132655 AAGCCACCACCACCTTGCCAGTTTACAGACTTAGAAATACCACCTTGATCTTCCCCATCG 132714 || || || ||||||||||| || |||| || ||||||||||| || ||||| Sbjct 593 AAACCGCCTCCACCTTGCCAATTCACAGTAGATGAGATACCACCTTGCTCA---CCATCA 649 Query 132715 ATCACTTTTTCCAAGCGCGGAATAATATGGGTATGGCAATGATCACCAATCTCGATGGAG 132774 || |||||||| | || |||||||||||||| | ||| || || || || || Sbjct 650 ATAACTTTTTCAAGACGAGGAATAATATGGGTCTTTGCATGCTCGCCCATTTCAATCCCA 709 Query 132775 ATCCAACGTCTTTTCATCTTGTGAGCTACAGCGGCAGTAGTTCCCGAACCACCGAATGAA 132834 || | |||||| |||||||||| |||||||| ||||| ||||| |||||| ||| || Sbjct 710 ATATAGCGTCTTCTCATCTTGTGGGCTACAGCTGCAGTTGTTCCTGAACCAAGGAAAGAG 769 Query 132835 TCCAATACCAAATCACCTT 132853 || | || | |||||||| Sbjct 770 TCAAGAACAATATCACCTT 788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 437939172337600