Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq7149 82.4 1e-10 >seq7149 Length=218332 Score = 82.4 bits (90), Expect = 1e-10 Identities = 111/153 (73%), Gaps = 4/153 (3%) Strand=Plus/Minus Query 111241 TGATGCCAAATTGCAAACAGCCGTCTCATC--CTTATCTGTGTACTCTAAAATTTCTGTA 111298 ||| |||| ||||||||| || | ||||| || | ||||| || | ||||| || Sbjct 123062 TGAGGCCAGATTGCAAACGGCGATTTCATCGGCTGAA--GTGTATTCAACGATTTCCGTG 123005 Query 111299 CATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCA 111358 || | ||| ||||| ||||| |||| ||||| ||||| || |||||| || Sbjct 123004 CAAAGATTGCTGCTCTTTATCGTGCCCAGGTTCTTCTGGTTGGATTTGCGGTTGCAGGCG 122945 Query 111359 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCC 111391 || ||||| ||||||||||||||||| || ||| Sbjct 122944 TCTTTGTACAGCATGTAGGGCGTCCCGGTTTCC 122912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627967720924800