Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq5140 102 2e-16 >seq5140 Length=3466 Score = 102 bits (112), Expect = 2e-16 Identities = 72/81 (89%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 294858 ATATGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCT 294917 ||||||||||| || | |||||||||| || |||||||||||||||||||||||||||| Sbjct 7 ATATGGTGCCGGCACACGGATTCGAACT-GTGGACCTACTGATTACAAGTCAGTTGCTCT 65 Query 294918 ACCAGCTGAGCTATAACGGCA 294938 |||| ||||||||| ||||| Sbjct 66 ACCAACTGAGCTATGCCGGCA 86 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989230610164764