Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_030940.1 Length=32637 Score E Sequences producing significant alignments: (Bits) Value seq1760 104 5e-18 >seq1760 Length=1669 Score = 104 bits (114), Expect = 5e-18 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 2854 GGGCCTATAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTTCGAG 2913 |||||||||||||||| ||||||||||| ||||||||||||| |||||| || |||| || Sbjct 589 GGGCCTATAGCTCAGTTGGTTAGAGCAGCGGACTCATAATCCGTTGGTCGACAGTTCAAG 648 Query 2914 TCCGTGTGGGCCCACCA 2930 || || ||||||||||| Sbjct 649 TCTGTCTGGGCCCACCA 665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104306657016744