Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= NC_031117.1 Length=44885 Score E Sequences producing significant alignments: (Bits) Value seq1920 80.6 8e-11 >seq1920 Length=8530 Score = 80.6 bits (88), Expect = 8e-11 Identities = 73/92 (79%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 30223 CAGTGGTTTATCGACAAAGGCTATGGTGAGCTAAAGAAAACTGATAACGGTTACAACCAG 30282 || ||||||||||||||||| ||||| || | ||| | || || | || ||| || Sbjct 2312 CAATGGTTTATCGACAAAGGTTATGGCGAAGTCAAGCAGACAGAACAAGGCTACCCACAA 2253 Query 30283 TCAAAATTCACCAATAAAGGCGAACAATGGGT 30314 || ||||||||||||||||||||||| ||||| Sbjct 2252 TCCAAATTCACCAATAAAGGCGAACAGTGGGT 2221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143496446125032