Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1123 556 2e-153 seq1179 446 2e-120 seq1705 441 8e-119 >seq1123 Length=366939 Score = 556 bits (616), Expect = 2e-153 Identities = 1210/1795 (67%), Gaps = 46/1795 (3%) Strand=Plus/Plus Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209 || ||||||||||| || | || | | ||||| |||||||| ||||| ||||| | | Sbjct 23486 ACCTGAAATTCTCCGGAAAGAACACGTCTTGTGTATATATTACTTGTATATGGTTCAAAA 23545 Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269 || ||||| || || | |||||| || || || || || ||||| || || || | ||| Sbjct 23546 GATTCATTGTTCCCAAGAATTTGTGCTGTCGAAGCTGTAGGCATTGGAGCTACAAGCAAA 23605 Query 53270 CTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGAT 53327 ||||||| | ||| ||||| || ||| | |||| | | | ||||||||||||| Sbjct 23606 CTATTTCGTATACC--ATGTTTTGCAATTCGAGCTTTCAAATCGTTCCAATTCCAAAGAG 23663 Query 53328 CCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTA----CTGGCGTACGAT 53383 | ||| | |||||||||| ||| |||| | || Sbjct 23664 ATGTTGGTTGACGATTCCACATGTCAAACTGTAGAATACTTTTAGATACTGGTG----AT 23719 Query 53384 CCTACATATGTATCGTATGGTCC-TTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGC 53442 ||| |||| || || ||||| || || | | ||||| | ||||||||| || |||||||| Sbjct 23720 CCTTCATACGTTTCATATGGACCATTTCGT-TCAGCCAATTCACAACTTGCTTCTAATGC 23778 Query 53443 ACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAA 53502 ||| |||||||| ||||| || |||| |||| || | | ||||| || || | Sbjct 23779 ACCATAATAAATTGTTTCAAAAATCTGAATATTGAGCAATCGAGCTTCTTCACTTTCGTA 23838 Query 53503 TGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCT 53562 ||||||| | ||||| || || || || || ||||||||||| ||||| || |||| Sbjct 23839 TGGATAACGCATTAGAATGAATGCATCGGCCAAACCTTGAACACCGATACCTATCGGTCG 23898 Query 53563 ATGTCTCTTATTAGAGATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTT 53621 ||| | ||| || || || ||||| || | ||||||||| ||| ||| |||| || Sbjct 23899 ATGACGAAGATTCGA-ATATCGTGCTTCCGGTACGGGATAATAAGTAACATCAATAACTT 23957 Query 53622 TATTGAGGTTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATT 53678 | || || || | |||||| |||| || | |||| ||| ||||||| | Sbjct 23958 TGTTTAGATTACGAGTGACAA---CTTTAACAATCGATTTCAATTTTTTAAAATCATAGA 24014 Query 53679 GTCCATCTATT------ACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTA 53732 || || | | ||||| ||||||| ||||| || || | |||||| || || | Sbjct 24015 TTCGATTTTTATGATCAACAAATTTGTTCAAAGCAATCGAGGCTAAATTACAGACAGCAA 24074 Query 53733 CCTCAT---TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGG 53789 |||| ||| || | ||||| | ||||| || ||||||||| ||| ||||| | Sbjct 24075 TTTCATCTTTAG-AT--GAATATTCCACAATCTCCGTACAAAGATTAGAACATTTGATTG 24131 Query 53790 TTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCG 53849 | || | |||||||||||| || ||||| ||||||||||| || | || | Sbjct 24132 TACCAAGATTTTGTTGATTTGATTTACGATTACAATGATCCTTATAAACCATATACGGTG 24191 Query 53850 TACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGC-CTTTATTATA 53908 | |||||||| || || ||||| ||||| | ||| | ||||||| | ||| | Sbjct 24192 TGCCAGTTTCGATTTGTGATTCAATAATGGAAAACCAAAGATCACGAGCACGACATTGT- 24250 Query 53909 GATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAA 53968 ||| |||| ||||| |||| || || ||| | |||||| || || |||||| Sbjct 24251 GATCGATATCGTTTTTCATTTTCATAATGTTCATATAGCTTTTCAAATTCTTCACCCCAA 24310 Query 53969 ACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC 54028 || ||||||||||| |||| |||||||||||| |||||| | | || | | | Sbjct 24311 CAATCAAATAATCCAGGACACTCATTCGGACACATCAATGACCACATTGCATCTTGATCC 24370 Query 54029 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 54088 || |||||||| || | ||||||||||||||| || ||||| ||| | | | | Sbjct 24371 ACACGTTTCATGAATAAATCAGGAATCCAAAGGGCATAAAATAAATCACGTGCACGTAAT 24430 Query 54089 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 54148 || ||| ||| ||||| || ||||| | || | | ||||| |||||||| ||| Sbjct 24431 TCTTCGGATCCGGTATTTTTACGAAGATTTATAAAATCAAAGATATCCGAATGCCATGGT 24490 Query 54149 TCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 54208 || | || |||| | ||||||| |||||||| || || ||||| | |||| ||| Sbjct 24491 TCTAGATAGATGGCAAATGCTCCAGGACGTTTGTTGCCACCTTGATCAACATATCGAGCC 24550 Query 54209 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 54268 || ||||| || || | ||||| |||| | ||||| || ||||| || |||| Sbjct 24551 GTATTATTGTATACACGTAACATAGGAACCAAGCCATTAGAAAATCCATTCGTACCGGCA 24610 Query 54269 ATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTA 54328 ||||| || ||| | || ||| | || ||||| || || || || ||| Sbjct 24611 ATATAACTACCAGAAGATCGGATACAATGAACATTAAGACCAATACCGCCAGCTGATTTT 24670 Query 54329 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG 54388 || || | || || ||| | |||||||| || || || ||||||||||| |||| Sbjct 24671 GAAATAATGGCACAATTTTTAAGGGTATCATATATACCTTCAATACTATCATCACTCATA 24730 Query 54389 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 54448 |||| |||||||| || | ||| | || | || || |||||||| || ||||| Sbjct 24731 GTAAGCAGAAAACATGATGATAATTGTGGCCGTTTTGTGCCGGCATTAAACAATGTAGGT 24790 Query 54449 GAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATA 54508 || || || |||||||| ||||| || | || ||| ||||| || || || | || ||| Sbjct 24791 GATGCATGTGTAAACCAATTTTCCGAGATTAAATTATACGTTTCAATGGCGGCATCGATA 24850 Query 54509 TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 54568 || |||||| || | || |||||| ||||| || || |||| ||| || | | Sbjct 24851 TCATCACCATGAATACCAATAGCACAACGCATCAACATATGTTGGGGTCGTTCGACAACC 24910 Query 54569 TTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 54628 |||| | ||||| ||||| || | | || ||||| ||||||||||| ||||| Sbjct 24911 TTGTCGCAAATTTTGAGCAAATAACTTCGATATAATGTTTTGAAACCAAAATAATTGTAA 24970 Query 54629 GAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACA 54688 ||| || || || || || || | || || | || | | | ||| | || | Sbjct 24971 TTAAAATCACGATCATAGATTATGGCAGAATTAA---TACGTTCAGAATTGGCCATTATA 25027 Query 54689 --TCCATGGTAATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGA-CAT 54743 | ||| | | ||| || ||||| |||| ||| ||| | | ||||| | | Sbjct 25028 ATTTCAT-AAATTTCTTTCGATATAATTGGAGTGGGTTGACCAGTATGTTCATTGATCGT 25086 Query 54744 AGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTG 54803 | || ||||||| | || || || || ||| ||||||||||| |||| ||||| Sbjct 25087 TG-TATATAAATCATGAATAACATCGGAGAAATTTTTCTTTGTTTCTTTATGTAAATTTG 25145 Query 54804 ATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTG 54863 ||| ||||||| |||||| |||||||||||||| ||||| || || | ||||||| Sbjct 25146 ATATAGCTATTCGAGCGGCAAGAATGGCATAATCAATATGTTCAGTGGTCAATGTGGCTG 25205 Query 54864 CTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCC 54918 | ||||| |||| | ||||||||| ||||| || ||| ||||| ||| Sbjct 25206 CAATTTCTGCTGCTAATTCATCCAATTCTTTTGTTGTAACACCAGAATATAATCC 25260 Score = 102 bits (112), Expect = 1e-16 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 52829 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 52888 || ||||||||||||| ||| |||||||| ||||| | || || ||| || ||||| Sbjct 23103 GCCGGTTTCGTACGTAAATAATACATTCCGGTTTTCAATCCTGAACGCCAACCAAAAAAA 23162 Query 52889 TGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 52948 ||||| ||| | ||| | | | | || || || | ||| || || | ||||||||| Sbjct 23163 TGCATTGATGTCAATTTCGTAATATTTGGCTCGGCAAAATGAATGTTTAATGATTGACTT 23222 Query 52949 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 53008 ||||| ||| | || || | || ||||||| | | || || || |||| |||||| Sbjct 23223 TGATCAATGTATGCACCACGATCAACAGCCATCTGGACAATTGTTTTCTGTGATATTTCC 23282 Query 53009 CAAATAGTTTTATA 53022 |||| |||||| || Sbjct 23283 CAAACAGTTTTGTA 23296 >seq1179 Length=350002 Score = 446 bits (494), Expect = 2e-120 Identities = 1099/1647 (67%), Gaps = 41/1647 (2%) Strand=Plus/Minus Query 52799 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 52858 || |||| ||| ||||| || | | ||| ||||| || |||| ||| |||||||| Sbjct 63288 TTATCCACTGTAAATTGTATAGCTTGTGCTGCCGGTTTTGTTCGTAAATAATACATTCCT 63229 Query 52859 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGA 52918 ||||| | || || |||||| || |||||||| || | ||| | | | || Sbjct 63228 GTTTTCAATCCATTACGCCATCCATAGAAATGCATCGAAGTAATTTTTGCTTTAGATGGT 63169 Query 52919 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 52978 || || ||||| | ||| | |||||||||||||| || || || || | || ||| Sbjct 63168 TCAGCCATATGAACATTGAGTGATTGACTTTGATCAATAAATGCACCACGATCAATGGCC 63109 Query 52979 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTT-AATATC 53037 || | | || || ||||| |||||||| | ||| || || | ||||| |||||| Sbjct 63108 ATATCAACAATACATTTCTGTGGTATTTCCCATACAGTCTTGTATAA-CGCTTTAATATC 63050 Query 53038 TTCTGGAA--GGTTTG-TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGAT 53094 || || | | | | ||||||| || || |||| || | || || | | || | Sbjct 63049 ATCCGGTATTGAATCGATATTCTGTATTGAACCACGATTAGCAATGATAATGGTTTTCAA 62990 Query 53095 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 53154 || ||| |||| | | | ||||| | | || | ||| ||||||| || | Sbjct 62989 TTCTTCACTCCAAAGGCCAAGATTGATTAAATCAGTGAGCAAATGTTGATTAACAACATC 62930 Query 53155 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTC 53214 ||| ||||||| ||| | | ||||||||| || ||||| ||||| | || || Sbjct 62929 AAAACTACCAGACATTACACGTCTAGTGTAAATGTTTGATGTATATGGTTCAAATGATTC 62870 Query 53215 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 53274 |||||| || |||||||| || || ||||| || ||||| ||||| || | ||||||||| Sbjct 62869 ATTATTGCCTAAAATTTGTGCTGTAGATGCTGTTGGCATTGGTGCAACAAGTAAACTATT 62810 Query 53275 TCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGAC 53332 || | ||| || || | ||||| |||| | | ||||| ||||||||| | Sbjct 62809 TCGTATACC--ATTTTGAGCAATTTTTGCTTTCAATTCATTCCAATCCCAAAGATCAGTT 62752 Query 53333 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATCCTAC 53388 ||| |||||||||||| || ||||| | ||||| | Sbjct 62751 GGTGTGCGGTTCCACATATCATATTGTAGAATACCTTTCGATACTGGTG----ATCCTTC 62696 Query 53389 ATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTA 53448 |||||| || ||||| || || ||||| | ||||||||| || || |||||||| || Sbjct 62695 ATATGTTTCATATGGGCCAAATTTTTCAGCCAATTCACAACTTGCTTCCAATGCACCATA 62636 Query 53449 ATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATA 53508 |||||| ||||| || || | |||| | | || ||||| || || ||| ||||||| Sbjct 62635 ATAAATTGTTTCAAATATTTGAATATTCATTTGTTTAGCTTCGAGACTTTCATATGGATA 62576 Query 53509 AT---TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 53565 | ||||| | || || || ||||| ||||| |||||||| || || |||| ||| Sbjct 62575 ACGCATTAAGT---TGAATGCATCGGCTAAACCTTGTACACCAATTCCAATCGGTCGATG 62519 Query 53566 TCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT 53625 | ||| || || ||||| || | |||||| ||||| |||| |||||||| || Sbjct 62518 ACGTAGATTCGAACGTTTCGCTTCCGGTAATGGATAAAAATTACTATCGATAATTTTGTT 62459 Query 53626 GAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAAT-TGTCCAT 53684 | ||| | |||||||| || | || || ||||| | |||||||| | | Sbjct 62458 CAAATTTTTTGTCATTACTTTAACAATTTCTTTGAGTTTATCATAATCAAATGTAAAAAG 62399 Query 53685 CTATT-----ACAAACATGTT-CAATGCAATAGATGCCAGATTACAAACGGCTACCTCAT 53738 || | ||||| | || ||||| ||| || |||| |||||||||||| | |||| Sbjct 62398 CTTTGGATCGACAAA-ACGTGGCAATGAAATTGAAGCCAAATTACAAACGGCAATTTCAT 62340 Query 53739 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 53798 ||| | ||||| | || || || |||||||| ||| ||||||||||| |||| Sbjct 62339 CAGCTGATGAATATTCAACAATTTCCGTACAAAGATTTGAACATTTGATGGTTCCCAAAT 62280 Query 53799 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTT 53858 |||||||||| || ||||| ||| ||||| | ||| |||| |||||||||| Sbjct 62279 TTTGTTGATTTGATTTACGATTACAATGATCTTTATATACCATGTATGGAGTACCAGTTT 62220 Query 53859 CAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATC 53918 |||| || | || | ||| || ||| | || | || || | | || || | Sbjct 62219 CAATTTGTGCATCCAAAATGGCAAACCATAAATCATGTGCTTTCACTTGTGACCGATAAC 62160 Query 53919 TCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCA 53978 ||| | || ||| || ||| | ||| || || || |||||| |||| | Sbjct 62159 GACCTTCACGCTCATATTGTTCATATAGCTTTTCGAATTCTTCACCCCAA-CATTCATGA 62101 Query 53979 A-TCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTC-ATCCTTCA-CTCGTT 54035 | ||| |||||||||| ||||||||||| |||||| || || || |||| | |||| Sbjct 62100 AGTCCGGGACATTCATTTGGACACATCAATGACCACATACCATCCAT--TTCAACACGTT 62043 Query 54036 TCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCG 54094 ||||||| | ||| || ||||| | || ||| ||||| || | | | | || ||| Sbjct 62042 TCATAAACAAATCCGGTATCCACAATGC-ATAGAATAGGTCACGTGCACGTAGCTCTTCG 61984 Query 54095 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 54154 || ||||||||||| ||||| | || || | |||||| | |||||| || ||||| Sbjct 61983 GAACCAGTATTCTTTTTTAGATCCAAAAAGGCAAAAATATCTGCATGCCATGGCTCCAAA 61924 Query 54155 TATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 54214 || || | | | || || ||||| || || ||||| | || | || |||||| Sbjct 61923 TAGATAGCAAATGCACCTGGACGTTTTCCACCACCTTGATCCACATAACGTGCAGTGTTA 61864 Query 54215 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAG 54274 || | || | |||||||| | | ||||||||| |||||| || || | ||||| Sbjct 61863 TTGAATACACGTAACATTGGTACTAAACCATTGGAAAAACCATTCGTACCAGCAATATAT 61804 Query 54275 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATT 54334 ||| | ||||||| | || || || || || || || ||| || || Sbjct 61803 GAACCATGTGAACGAATACAATGAACATTAAGGCCAATACCACCGGCAGATTTCGAAATA 61744 Query 54335 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA-TGTTAAG 54393 | ||| ||| |||| || |||||||||||||| || || |||||||| || ||| || Sbjct 61743 ATTGCACATTGTTTCAATGTATCATAGATGCCTTCAATGCTATCATCGCCCATTGTCAAT 61684 Query 54394 TAGAAAACAGCTAGACATTTGGTGACG 54420 ||||| || | |||||||| |||| Sbjct 61683 AAGAAACAAGAT-GACATTTGTGGACG 61658 Score = 122 bits (134), Expect = 1e-22 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 54433 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC 54492 ||| || || ||||| || || || ||||||||| ||| || | ||||| || || || Sbjct 61565 ATTGAACAATGTAGGTGATGCATGTGTAAACCATCCTTCGGACATAAGATTATATGTTTC 61506 Query 54493 GATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTG 54552 ||| |||| || ||||| || |||||| || || || |||||||| ||||| || || Sbjct 61505 GATTGCTGCATCAATATCATCTTTATGAATACCAACGGCAACACGCATCAACATATGTTG 61446 Query 54553 AGGTCTTTCAACGATCTTGTTGTTTA-TTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAA 54611 || | |||||| | ||| ||| | |||||| ||| || || | ||| ||||| | Sbjct 61445 TGGACGTTCAAC-AGCTTTTTGACCAATTTTCAACAAATACGAACGATACAATGTTTTGA 61387 Query 54612 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTT 54660 |||||||||| ||| || | | ||||| || ||||| || |||| || Sbjct 61386 AACCAAAATAATTGAATCGATAATCTCGATCATAAATGATCGCTGAATT 61338 >seq1705 Length=717327 Score = 441 bits (488), Expect = 8e-119 Identities = 651/911 (71%), Gaps = 17/911 (2%) Strand=Plus/Plus Query 23829 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCT 23888 ||||| || || ||||||| ||||| | |||||||||||||||||||| | ||||||| Sbjct 625432 GACATGACACCACTTTTTTGATATTCGGCAACACGTTTTTCGAAAAAATTTGATTTACCT 625491 Query 23889 TCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAAT 23948 || ||||| || | |||||| || || ||||||||| ||||| | ||| | | Sbjct 625492 TCCAATGAAATTTGTTCCATAAATTCAAATGGATTGGCCGTTTTATAATGTTTTTCACAA 625551 Query 23949 CCCAATTC-AGAAATCAATCTATCTGCGACAA-ACTCCATATATGTTTTCATCATTTCAC 24006 |||||| | ||| || | |||||| |||| | || ||||| ||| | || Sbjct 625552 TTCAATTCTACCAATAAA-CGATCTGC-ACAATATTCAATATAATCGGACATTAATTTTG 625609 Query 24007 AATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGA 24066 ||||||| || || | | |||||| | || | || | ||||| |||||||| || | Sbjct 625610 AATTCATGCCAATCAATGAAACTGGTAATGCATCGGTCAAGAATTCCTGTTCAATCGATA 625669 Query 24067 CCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGA----TACAATAAATGT 24122 | || || | |||||| || || || || | |||| ||| | | ||| Sbjct 625670 CAGCATCGATAATAATA--TCA-ACAATTCGTTGTGGTGATGGACGATTACGA-ATATGG 625725 Query 24123 TTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTG 24182 | ||||| || ||||| ||||| || |||| || || || | ||| ||||| || Sbjct 625726 TGAAACAATAAGCATGCAAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATTC 625785 Query 24183 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT 24242 ||||| || || || ||||| |||||||| |||||||||||||| || | |||||||| Sbjct 625786 GAAAATGTAAGACCAGGCATGAGGCCACGTTTTTTAAGCCAAAAAATTGCGGCAAATGAA 625845 Query 24243 CCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCA----TAACC 24298 |||||||| || |||||||| || || ||||| ||||| | | ||| | |||| Sbjct 625846 CCAGAAAAAAAGATTCCTTCAACGGCTGCAAATGCAATCAAACGTTCAGCGAATGTAACT 625905 Query 24299 GGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGT 24358 | | || || |||| | |||||| | || || |||| ||||||||| | | Sbjct 625906 GAATCA-TCCTGGGTCCAACGTATAGCCCATTTAGCTTTTTTTTCTACACAAGGTAAATT 625964 Query 24359 CTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAA 24418 ||| ||||| || ||| | | || |||| ||| ||| |||||||||| ||||| Sbjct 625965 ACGTATGGCATTGAATAGAAAATCTTGTTCACTACGATCCGATACATATGTATTGATCAA 626024 Query 24419 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCT 24478 | ||||||||| ||||||| ||||||||||| |||||||| || || ||||| | Sbjct 626025 TAATGAATACATTTCTGAATGAACATTTTCAATGGCAATTTGAAAGCCATAAAAACAACG 626084 Query 24479 AGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCC 24538 || || | || ||||| || | ||| ||||| || | ||||||||| || || || Sbjct 626085 TGCTTCTGGTATTTGTACATCACGAATAAAACGTTCGGCCAGATTTTCATTGACAATACC 626144 Query 24539 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAG 24598 || || || |||||||| |||||||||||| | || |||| |||||| | || | | Sbjct 626145 ATCGCTTGCAGCAAAAAATGCCAATACATGTGTAATGAAATGTTTTTCATTTGCATTCAA 626204 Query 24599 TTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 24658 || |||||||| ||||| | || |||||||||||| |||||||| |||||||| Sbjct 626205 TTGATTCCAATGGGCAATATCACGACTTAGATCCACTTCTTCAACTGTCCAGAATGATGC 626264 Query 24659 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 24718 || || ||||||||||| |||| ||||||||||||||||||||||| | |||||| | Sbjct 626265 TTCAGCTTTTTTATACATGATCCAAATGTCATGATATTGAATTGGAAACAAAACAAAACG 626324 Query 24719 ATTTGGATTTT 24729 ||||||||||| Sbjct 626325 ATTTGGATTTT 626335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593708938886880