Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq206 140 2e-28 >seq206 Length=237414 Score = 140 bits (154), Expect = 2e-28 Identities = 220/315 (70%), Gaps = 0/315 (0%) Strand=Plus/Plus Query 97290 ATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTAT 97349 ||||||||| | || | ||||| | ||| | || ||||| | || |||| || | Sbjct 141864 ATTCCAAGCCGATATAATCATTCGACGATCATTCGGATTTGTTTTGATCGTATGGATAAG 141923 Query 97350 CTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGC 97409 ||| |||||||||||||| |||| || ||||| | || || ||||||| || Sbjct 141924 CTGTTTTAATTGATCAACACCTTGAGCATTATAATCGGAATTTTTGTCTCGATATTCGGC 141983 Query 97410 TCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACA 97469 |||||||| |||||||| || ||||| || || || || || ||||||| | ||| Sbjct 141984 ACCAAAATGTCTCCATTGAAAACCATATACTGGACCTAGATCACCTTCTTGACGATCGGC 142043 Query 97470 GAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGA 97529 || ||||| |||| | | | | ||||||||||||||||| || | ||||| Sbjct 142044 AAACCCAAGGCTATCGAGAAATTCTCGTGATCCATTTGCATCCCAGATTTTTACACCTTT 142103 Query 97530 TGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAAC 97589 | | | |||| ||| |||||| |||||| | |||||| | | ||||| ||||| Sbjct 142104 TTCAGACAGCTTTTTCGAGTCAGTTGATCCTTGTAGAAACCATAGAAGCTCTTCGACAAC 142163 Query 97590 ACCTCTCCAAAATAC 97604 ||| | ||||||||| Sbjct 142164 ACCACGCCAAAATAC 142178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346776789710420