Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1705 260 1e-64 seq1179 257 1e-63 seq1123 187 2e-42 seq1489 116 3e-21 seq1658 109 5e-19 >seq1705 Length=717327 Score = 260 bits (288), Expect = 1e-64 Identities = 613/918 (67%), Gaps = 18/918 (2%) Strand=Plus/Minus Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566 ||||||||| | |||| || ||||| | | ||||| ||||||| ||| |||||| Sbjct 626354 GATGAACCATTATTGCGTGAAAATCCAAATCGTTTTGTTTTGTTTCCAATTCAATATCAT 626295 Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 |||||||||| |||||| ||||| || |||||||| || ||||| || |||||||| || Sbjct 626294 GACATTTGGATCATGTATAAAAAAGCTGAAGCATCATTCTGGACAGTTGAAGAAGTGGA- 626236 Query 57627 CTGTCTAAG----GATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTAT 57682 |||||| ||| | | ||||| || | || | | ||| | | |||| || Sbjct 626235 ---TCTAAGTCGTGATATTGCCCATTGGAATCAATTGAATGCAAATGAAAAACATTTCAT 626179 Query 57683 TAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGA 57742 || ||| || ||||| ||||| || ||| |||||||||||| || || ||| ||| ||| Sbjct 626178 TACACATGTATTGGCATTTTTTGCTGCAAGCGATGGTATTGTCAATGAAAATCTGGCCGA 626119 Query 57743 AAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGC 57802 | | ||| | || || ||| | | || || | || ||||| || |||||| | || Sbjct 626118 ACGTTTTATTCGTGATGTACAAATACCAGAAGCACGTTGTTTTTATGGCTTTCAAATTGC 626059 Query 57803 CATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAA 57862 ||||||||| || ||||||||||||||||| || | ||| |||| || || || | Sbjct 626058 CATTGAAAATGTTCATTCAGAAATGTATTCATTATTGATCAATACATATGTATCGG--AT 626001 Query 57863 CGACGAGA--AACGTAGACTGTTCAACGCGAT-CGAAACAATGCCCGCGATCGCCAAGAA 57919 || | || || | || ||||| || || || || | || | | || || Sbjct 626000 CGTAGTGAACAAGATTTTCTATTCAATGCCATACGTAA-TTTACCTTGTGTAGAAAAAAA 625942 Query 57920 GGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAAT 57979 || | ||| | || |||| | | | | || ||||| || | | || Sbjct 625941 AGCTAAATGGGCTATACGTTGGACCCAGGATGATTCAGTTACATTCGCTGAACGTTTGAT 625882 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039 || || || ||||| ||||| || || ||||| || ||||| ||||| |||||| | Sbjct 625881 TGCATTTGCAGCCGTTGAAGGAATCTTTTTTTCTGGTTCATTTGCCGCAATTTTTTGGCT 625822 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 || ||||| ||||| ||||| || || || ||| || || ||||| || || || || Sbjct 625821 TAAAAAACGTGGCCTCATGCCTGGTCTTACATTTTCGAATGAATTGATTTCACGTGATGA 625762 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCG 58159 || | ||| ||||||||| ||| || ||| || ||| ||| || | | Sbjct 625761 AGGATTACATTGTGATTTTGCATGCTTATTGTTTCACCATATTCGTAATCGTCCATCACC 625702 Query 58160 GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGA 58219 | || || | || ||||| | ||| || || |||| ||| | || || | ||||| Sbjct 625701 ACAACGAATTGTTGATATTATTATCGATGCTGTATCGATTGAACAGGAATTCTTGACCGA 625642 Query 58220 AGCCCTACCGGTGGCCATGCTCGGTATGAA--CAATGATTTGATGTCAAAGTACATTGAG 58277 || |||| || | || | || ||||| ||| | || ||||| | || ||||| Sbjct 625641 TGCATTACCAGTTTCATTGATTGGCATGAATTCAA--AATTAATGTCCGATTATATTGAA 625584 Query 58278 TTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCATTACAACACGAAAAAT 58337 | | ||| || | | ||| | ||| ||| | | || ||||| || ||| ||| Sbjct 625583 TATTGTGCAGATCGTTTATTGGTAGAATTGAATTGTGAAAAACATTATAAAACGGCCAAT 625524 Query 58338 CCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaa 58397 || ||||| |||||| | | || || | || || || |||| |||||||||||| Sbjct 625523 CCATTTGAATTTATGGAACAAATTTCATTGGAAGGTAAATCAAATTTTTTCGAAAAACGT 625464 Query 58398 GTTAGCGAATATCAAAAA 58415 ||| ||||||||||||| Sbjct 625463 GTTGCCGAATATCAAAAA 625446 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| |||||| |||| || ||||| || || | || ||||| || || Sbjct 502429 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAAACAATTACATTGGAAGTTGAGCCATCA 502488 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||||| || ||| | ||| || || ||||| | || || || ||| Sbjct 502489 GATACAATCGAAAATGTGAAAGCCAAAATTCAAGATAAAGAAGGAATCCCACCAGATCAG 502548 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || || || || |||||||||||||| || |||| ||||| ||| Sbjct 502549 CAGCGATTGATTTTTGCCGGTAAACAGTTGGAAGATGGCCGAACCTTGAGTGATTACAAC 502608 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || ||||||||||| ||||| ||||| || Sbjct 502609 ATCCAAAAAGAATCCACTCTCCATCTTGT 502637 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || |||| || ||||| || || | || || ||||| || Sbjct 501745 ATGCAAATTTTCGTGAAAACATTGACTGGTAAAACCATTACATTGGAAGTGGAACCATCT 501804 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| |||||| | ||| || || ||||| | || || |||||| Sbjct 501805 GACACTATTGAAAATGTCAAAGCTAAAATCCAAGATAAAGAAGGTATCCCACCAGACCAG 501864 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || || ||||| || || ||||| || | ||| || |||||| ||| Sbjct 501865 CAACGATTGATCTTTGCTGGAAAGCAATTGGAGGATGGTCGAACTTTGTCCGATTACAAC 501924 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| ||||| || |||||||| ||| | |||| | || |||| Sbjct 501925 ATCCAAAAGGAATCCACCCTTCATCTCGTATTACGACTTCGTGGTGGTA 501973 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/214 (71%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || || || |||| ||||| || || || | || || || || ||| Sbjct 502201 ATGCAAATTTTTGTCAAAACATTGACCGGCAAGACCATTACATTGGAAGTCGAGCCATCC 502260 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| || ||| | ||| |||||| ||||| | || || || ||| Sbjct 502261 GATACCATTGAAAATGTGAAAGCTAAAATTCAGGACAAAGAAGGTATCCCACCAGATCAG 502320 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || || || || |||||||||||||| || |||| |||||||| Sbjct 502321 CAACGGTTGATCTTTGCCGGTAAACAGTTGGAAGATGGCCGAACATTGAGTGATTATAAT 502380 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTA 31406 || ||||||||||| || || ||||| || |||| Sbjct 502381 ATCCAAAAAGAATCCACCCTCCATCTTGT-CTTA 502413 >seq1179 Length=350002 Score = 257 bits (284), Expect = 1e-63 Identities = 1053/1643 (64%), Gaps = 36/1643 (2%) Strand=Plus/Minus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 || ||||||||||| ||||| || | ||| |||||||| || || | ||||||||| || Sbjct 63288 TTATCCACTGTAAATTGTATAGCTTGTGCTGCCGGTTTTGTTCGTAAATAATACATTCCT 63229 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225 || |||| || | ||| | || ||||| ||||| || | |||| | | | || Sbjct 63228 GTTTTCAATCCATTACGCCATCCATAGAAATGCATCGAAGTAATTTTTGCTTTAGATGGT 63169 Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285 |||| | ||||||| || ||||| ||||| ||||| || || ||||| |||| Sbjct 63168 TCAGCCATATGAACATTGAGTGATTGACTTTGATCAATAAATGCACCACGATCAATGGCC 63109 Query 22286 ATATTTATCAATGTACGCATC---GACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342 |||| | |||| || || | ||||||||||| |||||||| | | || Sbjct 63108 ATATCAA-CAAT--ACATTTCTGTGGTATTTCCCATACAGTCTTGTATAACGCTTTAATA 63052 Query 22343 TCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTT- 22401 || |||||| || ||||| |||| | || || ||| ||||| | |||| Sbjct 63051 TCATCCGGTATTGAATCGATATTCTGTATTGAACCACGATTAGCAATGATAATGGTTTTC 62992 Query 22402 AATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCAC 22461 ||| | || |||| | || | | | ||||| ||| || ||| | || || || Sbjct 62991 AATTCT-TCACTCCAAAGGCCAAGATTGATTAAATCAGTGAGCAAATGTTGATTAACAAC 62933 Query 22462 TTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGA 22521 | ||| || |||| || || | ||||||||| ||||| | ||||| || || Sbjct 62932 ATCAAAACTACCAGACATTACACGTCTAGTGTAAATGTTTGATGTATATGGTTCAAATGA 62873 Query 22522 TTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGA 22581 |||||| || || | || || || || || || || ||||| || || | |||| Sbjct 62872 TTCATTATTGCCTAAAATTTGTGCTGTAGATGCTGTTGGCATTGGTGCAACAAGTAAACT 62813 Query 22582 GTTTCTCAAGCCGTGCTTTGA---AATTTTACTCTTGAG-CATCGACCAGTCCCACAGAT 22637 |||| | || | ||||| | |||| || | | ||| ||| ||||| |||| Sbjct 62812 ATTTCGTATACCAT--TTTGAGCAATTTTTGCTTTCAATTCATT--CCAATCCCAAAGAT 62757 Query 22638 CGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCG--CGACTCGCCGGGCT 22695 | | || || || ||||||||| ||||| | | || ||| | | | | Sbjct 62756 CAGTTGGTGTGCGGTT---CCACATATCATATTGTAGAATACCTTTCGATACTG-GTGAT 62701 Query 22696 GCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGC 22755 ||||| || ||||| || || ||| || | | || | ||| || || || ||||| || Sbjct 62700 -CCTTCATATGTTTCATATGGGCCAAATTTTTCAGCCAATTCACAACTTGCTTCCAATGC 62642 Query 22756 GCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTA 22815 || ||||| || || || || |||| | |||| || || ||| ||||| || Sbjct 62641 ACCATAATAAATTGTTTCAAATATTTGAATATTCATTTGTTTAGCTTCGAGACTTTCATA 62582 Query 22816 CGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCG 22875 || |||||| | ||| || || || | ||| || || || || || |||||||| Sbjct 62581 TGGATAACGCATTAAGTTGAATGCATCGGCTAAACCTTGTACACCAATTCCAATCGGTCG 62522 Query 22876 GTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCT 22935 | |||||||| ||| || || || || ||||| |||| |||||| || | Sbjct 62521 ATGACGTAGATTCGAACGTTTCGCTTCCGGTAATGGATAAAAATTACTATCGATAATTTT 62462 Query 22936 GTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTC----GTAAA 22991 |||||| ||| | |||| | ||| || ||| | || ||||| Sbjct 62461 GTTCAAATTTTTTGTCATTACTTTAACAATTTCTTTGAGTTTATCATAATCAAATGTAAA 62402 Query 22992 CGCCCGATTGTA-CAACAAACTTGTTG-ACGGCGATCGAGGCAAGATTGCATACGGCCAC 23049 | ||| | | ||||| || | | | || || || | ||| || ||||| | Sbjct 62401 AAGCT--TTGGATCGACAAAAC-GTGGCAATGAAATTGAAGCCAAATTACAAACGGCAAT 62345 Query 23050 CTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCC 23109 || || || | || || |||||||| ||||| ||||| ||| || || || || Sbjct 62344 TTCATCAGCTGATGAATATTCAACAATTTCCGTACAAAGATTTGAACATTTGATGGTTCC 62285 Query 23110 CAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCC 23169 |||||| || || ||| ||||| || ||| || || | |||||| || || || Sbjct 62284 CAAATTTTGTTGATTTGATTTACGATTACAATGATCTTTATATACCATGTATGGAGTACC 62225 Query 23170 CGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCAC 23229 || || | || | || | || || ||| | | || || | || || | Sbjct 62224 AGTTTCAATTTGTGCATCCAAAATGGCAAACCATAAATCATGTGCTTTCACTTGTGACCG 62165 Query 23230 GTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTC 23289 || | ||||| ||| || | || || | | || ||||| |||| |||| || Sbjct 62164 ATAACGACCTTCACGCTCATATTGTTCATATAGCTTTTCGAATTCTTCACCCCAACATTC 62105 Query 23290 GGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCG 23349 || ||||| ||| | |||||||| | |||||| || ||||||| || Sbjct 62104 ATGAAGTCCGGGACATTCATTTGGACACATCAATGACCACATACCATCCATTTCAACACG 62045 Query 23350 TCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTC 23409 | ||||||| | |||||||||||| | || ||||| || || || || || | ||| || Sbjct 62044 TTTCATAAACAAATCCGGTATCCACAATGCATAGAATAGGTCACGTGCACGTAGCTCTTC 61985 Query 23410 TTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAG 23469 || || |||||||| | |||||||||| | || | || |||||||| ||||| | Sbjct 61984 GGAACCAGTATTCTTTTTTAGATCCAAAAAGGCAAAAATATCTGCATGCCATGGCTCCAA 61925 Query 23470 GTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTT 23529 || | ||||| || || || | || || || ||||| || ||||| || ||||| Sbjct 61924 ATAGATAGCAAATGCACCTGGACGTTTTCCACCACCTTGATCCACATAACGTGCAGTGTT 61865 Query 23530 GTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCC--GCCTACGCCCGCCACA 23587 ||| | || | || ||| || || | ||| ||||| || | || || || | | Sbjct 61864 ATTGAATACACGTAACATTGGTACTAAACCATTGGAAAAACCATTCGTA--CCAGCAATA 61807 Query 23588 CTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGAT 23647 ||||| | || |||| ||||| | | || || || ||| | |||||||| Sbjct 61806 TATGAACCATGTGAACGAATACAATGAACATTAAGGCCAATACCACCGGCAGATTTCGAA 61747 Query 23648 ATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCG 23707 || || || |||||||||| || || |||||||| || ||||| || || | | Sbjct 61746 ATAATTGCACATTGTTTCAATGTATCATAGATGCCTTCAATGCTATCATCGCCCATTGTC 61687 Query 23708 ACCAAGAAACACGAAGACATTTG 23730 | |||||||| || |||||||| Sbjct 61686 AATAAGAAACAAGATGACATTTG 61664 >seq1123 Length=366939 Score = 187 bits (206), Expect = 2e-42 Identities = 981/1558 (63%), Gaps = 37/1558 (2%) Strand=Plus/Plus Query 22697 CCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCG 22756 ||||| |||||||| || ||||||| | | || | ||| || || || || || || Sbjct 23720 CCTTCATACGTTTCATATGGACCATTTCGTTCAGCCAATTCACAACTTGCTTCTAATGCA 23779 Query 22757 CCGTAATATATAGTCTCGAAGATTT---TCTTGTTCAATTCGGCGGCGGCGACGCTTTCG 22813 || ||||| || || || || || | | ||| |||| || || | | |||||| Sbjct 23780 CCATAATAAATTGTTTCAAAAATCTGAATATTGAGCAAT-CGA--GCTTCTTCACTTTCG 23836 Query 22814 TACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGT 22873 || || |||||| | | ||| || || |||| ||| ||||| || ||||| |||||| Sbjct 23837 TATGGATAACGCATTAGAATGAATGCATCGGCCAAACCTTGAACACCGATACCTATCGGT 23896 Query 22874 CGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTT 22933 || | |||||||| | ||| || || | ||||| || | ||| || | Sbjct 23897 CGATGACGAAGATTCGAATATCGTGCTTCCGGTACGGGATAATAAGTAACATCAATAACT 23956 Query 22934 CTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACG 22993 |||| | || | || |||| ||| || | ||| || || | Sbjct 23957 TTGTTTAGATTACGAGTGACAACTTTAACAATCGATTTCAATTTTTTAAAATCATAGATT 24016 Query 22994 CCCGATTGTA-----CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCA 23048 | |||| | ||||||| ||||| | || |||||||| | ||| || || || | Sbjct 24017 C--GATTTTTATGATCAACAAATTTGTTCAAAGCAATCGAGGCTAAATTACAGACAGCAA 24074 Query 23049 CCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGC 23108 || ||||| || | || || ||||| || ||||| ||||| ||| || || || | Sbjct 24075 TTTCATCTTTAGATGAATATTCCACAATCTCCGTACAAAGATTAGAACATTTGATTGTAC 24134 Query 23109 CCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGC 23168 | | ||| || || ||| ||||| || |||||| || | ||| ||||| |||| Sbjct 24135 CAAGATTTTGTTGATTTGATTTACGATTACAATGATCCTTATAAACCATATACGGTGTGC 24194 Query 23169 CCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCA 23228 | || |||| || || || || || | ||| | | |||| || || | Sbjct 24195 CAGTTTCGATTTGTGATTCAATAATGGAAAACCAAAGATCACGAGCACGACATTGT-GAT 24253 Query 23229 CG-TACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAG 23287 || || | ||| | || || | || || | | |||||||| |||| |||| Sbjct 24254 CGATATCGTTTTTCATTTTCATAATGTTCATATAGCTTTTCAAATTCTTCACCCCAACAA 24313 Query 23288 TCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACG 23347 || | || || | | |||||||||| | |||||||| || | || || Sbjct 24314 TCAAATAATCCAGGACACTCATTCGGACACATCAATGACCACATTGCATCTTGATCCACA 24373 Query 23348 CGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCC 23407 ||| |||| || | ||| || ||||| || || || || | || || || || | || Sbjct 24374 CGTTTCATGAATAAATCAGGAATCCAAAGGGCATAAAATAAATCACGTGCACGTAATTCT 24433 Query 23408 TCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCG 23467 || ||||| || || | || | ||| || || | |||| |||||| || || Sbjct 24434 TCGGATCCGGTATTTTTACGAAGATTTATAAAATCAAAGATATCCGAATGCCATGGTTCT 24493 Query 23468 AGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTG 23527 || || | |||||| || || || | || ||||| || ||||| || || || ||||| Sbjct 24494 AGATAGATGGCAAATGCTCCAGGACGTTTGTTGCCACCTTGATCAACATATCGAGCCGTA 24553 Query 23528 TTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACG--CCCGCCA 23585 || ||||| || | || ||| || || | || || || || | || || || | Sbjct 24554 TTATTGTATACACGTAACATAGGAACCAAGCCATTAGAAAATCCA--TTCGTACCGGCAA 24611 Query 23586 CACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCG 23645 | ||| | ||| | ||||| | | ||| || || || | ||||| | Sbjct 24612 TATAACTACCAGAAGATCGGATACAATGAACATTAAGACCAATACCGCCAGCTGATTTTG 24671 Query 23646 ATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCG 23705 | || || || || | ||| || || || || || || || || || || || | | | Sbjct 24672 AAATAATGGCACAATTTTTAAGGGTATCATATATACCTTCAATACTATCATCACTCATAG 24731 Query 23706 CGACCAAGAAACACGAAGACATTTG----CGCTTTGGGCGTAGCGGCCGAGAACAGTGTC 23761 | || ||||| || || | ||| || |||| || |||| |||| ||| Sbjct 24732 TAAGCAGAAAACATGATGATAATTGTGGCCGTTTTGTGC----CGGCATTAAACAATGTA 24787 Query 23762 GGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCA 23821 || || || ||||| | | ||| |||| ||| ||||| || ||||||||||| Sbjct 24788 GGTGATGCATGTGTAAACCAATTTTCCGAGATTAAATTATACGTTTCAATGGCGGCATCG 24847 Query 23822 ATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG--- 23878 || || || || || ||||| || || ||||||| ||| | ||| |||| ||| Sbjct 24848 ATATCATCACCATGAATACCAATAGCACAACGCATCAACATATGTTGGGGTCGTTCGACA 24907 Query 23879 ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAG 23938 ||| || ||| |||||||| || ||| || | | ||||| || |||||||| Sbjct 24908 ACCTTGTCGC---AAATTTTGAGCAAATAACTTCGATATAATGTTTTGAAACCAAAATAA 24964 Query 23939 TCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGCG 23998 | || ||||| |||||||| | | |||||| ||||| | ||| | | |||||| Sbjct 24965 TTGTAATTAAAATCACGATCATAGATTATGGCAGAATTAATACGTTCAGAATTGGCCATT 25024 Query 23999 ATGATGTTGTAATGAAAATTCGATATCATCGGCGT--TTTAACGCCGGTCTTTGGATCGA 24056 || || | ||| |||||||| || || || || | || || | | || || Sbjct 25025 ATAATTTCATAAATTTCTTTCGATATAATTGGAGTGGGTTGA--CCAGTATGTTCATTGA 25082 Query 24057 TCGCTTCATACATATCGATAATGACATCGAAAAAAGAATCTTTAGTCTCCTTGTGCAAAT 24116 ||| | ||| | ||| ||| |||||| | ||| | || || || || || |||| Sbjct 25083 TCGTTGTATATAAATCATGAATAACATCGGAGAAATTTTTCTTTGTTTCTTTATGTAAAT 25142 Query 24117 TAGACACGGCCAATCTAGCCGCAAGCAACGAATAGTCGGAATGATCGATGGTCATGGCCG 24176 | || | || | || ||| ||||| | | ||| || ||| || |||||| | | Sbjct 25143 TTGATATAGCTATTCGAGCGGCAAGAATGGCATAATCAATATGTTCAGTGGTCAATGTGG 25202 Query 24177 CTGCCGTCTCGGCGATTAGATTGTCCAATTCAGCGGTGGTCACGCCCGAATAGATTCC 24234 |||| | || || || | |||||||| || || || || ||||| | ||| Sbjct 25203 CTGCAATTTCTGCTGCTAATTCATCCAATTCTTTTGTTGTAACACCAGAATATAATCC 25260 >seq1489 Length=23360 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| |||||| |||| || ||||| || || | || ||||| || || Sbjct 5560 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAAACAATTACATTGGAAGTTGAGCCATCA 5501 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||||| || ||| | ||| || || ||||| | || || || ||| Sbjct 5500 GATACAATCGAAAATGTGAAAGCCAAAATTCAAGATAAAGAAGGAATCCCACCAGATCAG 5441 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || || || || |||||||||||||| || |||| ||||| ||| Sbjct 5440 CAGCGATTGATTTTTGCCGGTAAACAGTTGGAAGATGGCCGAACCTTGAGTGATTACAAC 5381 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || ||||||||||| ||||| ||||| || Sbjct 5380 ATCCAAAAAGAATCCACTCTCCATCTTGT 5352 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || |||| || ||||| || || | || || ||||| || Sbjct 6244 ATGCAAATTTTCGTGAAAACATTGACTGGTAAAACCATTACATTGGAAGTGGAACCATCT 6185 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| |||||| | ||| || || ||||| | || || |||||| Sbjct 6184 GACACTATTGAAAATGTCAAAGCTAAAATCCAAGATAAAGAAGGTATCCCACCAGACCAG 6125 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || || ||||| || || ||||| || | ||| || |||||| ||| Sbjct 6124 CAACGATTGATCTTTGCTGGAAAGCAATTGGAGGATGGTCGAACTTTGTCCGATTACAAC 6065 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| ||||| || |||||||| ||| | |||| | || |||| Sbjct 6064 ATCCAAAAGGAATCCACCCTTCATCTCGTATTACGACTTCGTGGTGGTA 6016 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/214 (71%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || || || |||| ||||| || || || | || || || || ||| Sbjct 5788 ATGCAAATTTTTGTCAAAACATTGACCGGCAAGACCATTACATTGGAAGTCGAGCCATCC 5729 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| || ||| | ||| |||||| ||||| | || || || ||| Sbjct 5728 GATACCATTGAAAATGTGAAAGCTAAAATTCAGGACAAAGAAGGTATCCCACCAGATCAG 5669 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || || || || |||||||||||||| || |||| |||||||| Sbjct 5668 CAACGGTTGATCTTTGCCGGTAAACAGTTGGAAGATGGCCGAACATTGAGTGATTATAAT 5609 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTA 31406 || ||||||||||| || || ||||| || |||| Sbjct 5608 ATCCAAAAAGAATCCACCCTCCATCTTGT-CTTA 5576 >seq1658 Length=21299 Score = 109 bits (120), Expect = 5e-19 Identities = 152/211 (72%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||| |||| || ||||| || || | || ||||| || || Sbjct 17862 ATGCAAATATTCGTCAAGACTTTGACTGGTAAAACAATTACATTGGAAGTTGAGCCATCA 17921 Query 31253 GACAGTGTCGAAACGGTCAAACAG--AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 || | |||||| || ||| || | ||| || || ||||| | || || || | Sbjct 17922 GATACAATCGAAAATGTGAAA-AGCCAAAATTCAAGATAAAGAAGGAATCCCACCAGATC 17980 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 ||||||| | || || || || |||||||||||||| || |||| ||||| | Sbjct 17981 AGCAGCGATTGATTTTTGCCGGTAAACAGTTGGAAGATGGCCGAACCTTGAGTGATTACA 18040 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||| ||||||||||| ||||| ||||| || Sbjct 18041 ACATCCAAAAAGAATCCACTCTCCATCTTGT 18071 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| || || || |||| |||||||| || || | || || || || || Sbjct 17633 CATGCAAATTTTTGTCAAAACATTGACCGGCAAAACCATTACTTTGGAAGTCGAGCCATC 17692 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | |||| || ||| | ||| |||||| ||||| | || || || || Sbjct 17693 AGATACCATTGAAAACGTGAAAGCTAAAATCCAGGACAAAGAAGGAATTCCACCAGATCA 17752 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || ||| | || || || || ||||| |||||||| | || |||| |||||||| Sbjct 17753 ACAACGTTTGATTTTTGCCGGTAAACAATTGGAAGATGGCAGAACATTGAGTGATTATAA 17812 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || ||||||||||| ||||| ||||| || Sbjct 17813 TATCCAAAAAGAATCTACTCTCCATCTTGT 17842 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || || || | || || ||||| || || | || || ||||| || Sbjct 17177 ATGCAAATTTTTGTCAAAACCTTAACTGGTAAAACCATTACATTGGAAGTGGAACCATCG 17236 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| |||||| | ||| ||||| ||||| | || || || ||| Sbjct 17237 GACACTATTGAAAATGTCAAAGCTAAAATCCAAGACAAAGAAGGTATCCCACCAGATCAG 17296 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || || || || || || ||||| || | ||| || ||||| ||| Sbjct 17297 CAACGGTTGATCTTTGCCGGAAAGCAATTGGAGGATGGTCGAACTTTGTCTGATTACAAC 17356 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTA 31402 |||||||||||||| || |||||||| ||| Sbjct 17357 ATTCAAAAAGAATCCACCCTTCATCTTGTA 17386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445756894031520