Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1123 533 2e-146 seq1179 466 2e-126 seq1705 432 5e-116 >seq1123 Length=366939 Score = 533 bits (590), Expect = 2e-146 Identities = 1195/1787 (67%), Gaps = 30/1787 (2%) Strand=Plus/Plus Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 || ||||||||||| || | || | | ||||| |||||||| ||||| ||||| | Sbjct 23486 ACCTGAAATTCTCCGGAAAGAACACGTCTTGTGTATATATTACTTGTATATGGTTCAAAA 23545 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262 || ||||| || || | |||||| || || || || || ||||| || || || | | | Sbjct 23546 GATTCATTGTTCCCAAGAATTTGTGCTGTCGAAGCTGTAGGCATTGGAGCTACAAGCAAA 23605 Query 71263 CTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCC 71322 ||||||| | ||||||| | ||| | |||| | | | ||||||||||||| Sbjct 23606 CTATTTCGTATACCATGTTTTGCAATTCGAGCTTTCAAATCGTTCCAATTCCAAAGAGAT 23665 Query 71323 GATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCA 71382 | |||| | || | ||| | ||||||| || Sbjct 23666 GTTGGTTGACGATTCCACATGTCAAACTGTAGAATACTTTTAGATACTGGTGATCCTTCA 23725 Query 71383 TATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAA 71442 || || || ||||| || | | ||| || | ||||||||| || |||||||| |||||| Sbjct 23726 TACGTTTCATATGGACCATTTCGTTCAGCCAATTCACAACTTGCTTCTAATGCACCATAA 23785 Query 71443 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 71502 ||||| ||||| ||||||| ||||||| | | ||||| || || |||||||| Sbjct 23786 TAAATTGTTTCAAAAATCTGAATATTGAGCAATCGAGCTTCTTCACTTTCGTATGGATAA 23845 Query 71503 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTC 71562 | ||||| || || || || || |||||||| || ||||| || |||| || | Sbjct 23846 CGCATTAGAATGAATGCATCGGCCAAACCTTGAACACCGATACCTATCGGTCGATGACGA 23905 Query 71563 TTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 71622 ||| ||| | ||||| || | ||||||||| ||| ||| |||| ||| || ||| Sbjct 23906 AGATTCGAATATCGTGCTTCCGGTACGGGATAATAAGTAACATCAATAACTTTGTTTAGA 23965 Query 71623 TTTCTGACT-ATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTAT 71681 || | || | | ||||| || | || | ||| ||||||| | | | || | | Sbjct 23966 TTAC-GAGTGACAACTTTAACAATCGATTTCAATTTTTTAAAATCATAGATTCGATTTTT 24024 Query 71682 T------ACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCAT---T 71732 ||||| |||||| |||| || || | |||||| || || | |||| | Sbjct 24025 ATGATCAACAAATTTGTTCAAAGCAATCGAGGCTAAATTACAGACAGCAATTTCATCTTT 24084 Query 71733 AGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATT 71792 || || | ||||| | ||| || || ||||||||| ||| ||||| || || | ||| Sbjct 24085 AG-AT--GAATATTCCACAATCTCCGTACAAAGATTAGAACATTTGATTGTACCAAGATT 24141 Query 71793 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTC 71852 ||||||||| || ||||| ||||||||||| ||| |||| || |||||||| Sbjct 24142 TTGTTGATTTGATTTACGATTACAATGATCCTTATAAACCATATACGGTGTGCCAGTTTC 24201 Query 71853 AATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGC-CTTTATTATATTCTTGTATC 71911 || || ||||| ||||| | ||| | | ||||| | ||| | || |||| Sbjct 24202 GATTTGTGATTCAATAATGGAAAACCAAAGATCACGAGCACGACATTGTGATCGA-TATC 24260 Query 71912 TCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTA 71971 ||||| |||| || ||| ||||| ||| || || || |||||| || || Sbjct 24261 GTTTTTCATTTTCATAATGTTCATATAGCTTTTCAAATTCTTCACCCCAACAATCAAATA 24320 Query 71972 ATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCA 72031 |||||||||| |||||||||||||||||||||||| | |||| | || || ||||||| Sbjct 24321 ATCCAGGACACTCATTCGGACACATCAATGACCACATTGCATCTTGATCCACACGTTTCA 24380 Query 72032 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTC 72091 | || | ||||||||||||||| || ||||| ||| | | | || ||| || Sbjct 24381 TGAATAAATCAGGAATCCAAAGGGCATAAAATAAATCACGTGCACGTAATTCTTCGGATC 24440 Query 72092 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 72151 | ||||| || ||||| | || | | ||||| |||||||| ||||| | || | Sbjct 24441 CGGTATTTTTACGAAGATTTATAAAATCAAAGATATCCGAATGCCATGGTTCTAGATAGA 24500 Query 72152 TGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 72211 |||| | |||| || |||||||| || || ||||| | |||| ||| || ||||| | Sbjct 24501 TGGCAAATGCTCCAGGACGTTTGTTGCCACCTTGATCAACATATCGAGCCGTATTATTGT 24560 Query 72212 AAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTC 72271 | || | ||||| |||| | ||||| || ||||| || |||| ||||| || | Sbjct 24561 ATACACGTAACATAGGAACCAAGCCATTAGAAAATCCATTCGTACCGGCAATATAACTAC 24620 Query 72272 CACTGGCACGAATAT--TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329 || | || ||| || ||| | |||| || || || || ||| || || | Sbjct 24621 CAGAAGATCGGATACAATGAACATTAA--GACCAATACCGCCAGCTGATTTTGAAATAAT 24678 Query 72330 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 72389 || || ||| | |||||||| || || || ||||||||||| |||| |||| || Sbjct 24679 GGCACAATTTTTAAGGGTATCATATATACCTTCAATACTATCATCACTCATAGTAAGCAG 24738 Query 72390 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 72449 |||||| || | ||| | || | || || |||||||| || ||||| || || || Sbjct 24739 AAAACATGATGATAATTGTGGCCGTTTTGTGCCGGCATTAAACAATGTAGGTGATGCATG 24798 Query 72450 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 72509 |||||||| ||||| || | || ||| ||||| ||||| || | || ||||| Sbjct 24799 TGTAAACCAATTTTCCGAGATTAAATTATACGTTTCAATGGCGGCATCGATATCATCACC 24858 Query 72510 ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATT 72569 ||| || || | || |||||| |||||||| || |||| ||| || | ||||| Sbjct 24859 ATGAATACCAATAGCACAACGCATCAACATATGTTGGGGTCGTTCGACAACCTTGTCGCA 24918 Query 72570 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 72629 ||||| | ||| || | | || ||||| ||||||||||| ||||| ||| || Sbjct 24919 AATTTTGAGCAAATAACTTCGATATAATGTTTTGAAACCAAAATAATTGTAATTAAAATC 24978 Query 72630 TCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATA--TCCATG 72687 || || || || || | ||||| | || | | | ||| | |||| | ||| Sbjct 24979 ACGATCATAGATTATGGCAGAATTAA---TACGTTCAGAATTGGCCATTATAATTTCATA 25035 Query 72688 GTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTG--AAT 72744 | || || ||||| |||| ||| ||| | | ||| || |||| || Sbjct 25036 AATTTCTTTCGATATAATTGGAGTGGGTTGACCAGTATGTTCATT--GATCGTTGTATAT 25093 Query 72745 AAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCT 72804 ||||| | || || || || ||| |||||||| || |||| |||||||| ||| Sbjct 25094 AAATCATGAATAACATCGGAGAAATTTTTCTTTGTTTCTTTATGTAAATTTGATATAGCT 25153 Query 72805 ATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCT 72864 |||| ||||| |||||||||||||| ||||| || || | |||||||| |||||| Sbjct 25154 ATTCGAGCGGCAAGAATGGCATAATCAATATGTTCAGTGGTCAATGTGGCTGCAATTTCT 25213 Query 72865 GCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCC 72911 ||||| | ||||||||| ||||| || ||| ||||| ||| Sbjct 25214 GCTGCTAATTCATCCAATTCTTTTGTTGTAACACCAGAATATAATCC 25260 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 70827 TTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCAT 70886 ||||||||||| ||| ||||| || ||||| | || || ||| || |||||||||| Sbjct 23108 TTTCGTACGTAAATAATACATTCCGGTTTTCAATCCTGAACGCCAACCAAAAAAATGCAT 23167 Query 70887 ACTCGTTAGTTT-GGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGAT 70945 || | ||| | |||| | || ||||| | ||||| || | || |||||||||| Sbjct 23168 TGATGTCAATTTCGTAATA-TTTGGCTCGGCAAAATGAATGTTTAATGATTGACTTTGAT 23226 Query 70946 CGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAA 71005 | ||| | || || | || ||||||| | | || || || |||| |||||||||| Sbjct 23227 CAATGTATGCACCACGATCAACAGCCATCTGGACAATTGTTTTCTGTGATATTTCCCAAA 23286 Query 71006 TAGTTTTATA 71015 |||||| || Sbjct 23287 CAGTTTTGTA 23296 >seq1179 Length=350002 Score = 466 bits (516), Expect = 2e-126 Identities = 1108/1652 (67%), Gaps = 51/1652 (3%) Strand=Plus/Minus Query 70792 TTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCT 70851 || |||| |||||| || || | | ||| | ||| || |||| ||| ||||| ||| Sbjct 63288 TTATCCACTGTAAATTGTATAGCTTGTGCTGCCGGTTTTGTTCGTAAATAATACATTCCT 63229 Query 70852 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAAT-AGCTAGG 70910 ||||| | || || |||||| || |||||||| || | ||| | | || | || Sbjct 63228 GTTTTCAATCCATTACGCCATCCATAGAAATGCATCGAAGTAATTTTTGCTTTAGAT-GG 63170 Query 70911 ATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 70970 || || || |||| ||| | || ||||||||||| || || || || | || || Sbjct 63169 TTCAGCCATATGAACATTGAGTGATTGACTTTGATCAATAAATGCACCACGATCAATGGC 63110 Query 70971 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTT-AATAT 71029 ||| | | || || ||||| |||||||| | ||| || || | ||||| ||||| Sbjct 63109 CATATCAACAATACATTTCTGTGGTATTTCCCATACAGTCTTGTATAA-CGCTTTAATAT 63051 Query 71030 CTTCTGGAA--GGTTTG-TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGA 71086 | || || | | | | ||||||| || || |||| || ||||| || | |||| | Sbjct 63050 CATCCGGTATTGAATCGATATTCTGTATTGAACCACGATTAGCAATGATAATGGTTTTCA 62991 Query 71087 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTT 71146 |||||| |||| | | | ||||| | | || | ||| ||||||| || | Sbjct 62990 ATTCTTCACTCCAAAGGCCAAGATTGATTAAATCAGTGAGCAAATGTTGATTAACAACAT 62931 Query 71147 GAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACT 71206 ||| ||||||| ||| | | ||||||||| || ||||| ||||| | ||| | Sbjct 62930 CAAAACTACCAGACATTACACGTCTAGTGTAAATGTTTGATGTATATGGTTCAAATGATT 62871 Query 71207 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTAT 71266 ||||||| || |||||||| || || ||||| || ||||| ||||| || | || ||||| Sbjct 62870 CATTATTGCCTAAAATTTGTGCTGTAGATGCTGTTGGCATTGGTGCAACAAGTAAACTAT 62811 Query 71267 TTCTAAGACCATGT-GATCGGATTTTATCTTTTAGAGATTC---CCAATTCCAAAGATCC 71322 ||| | ||||| | || | ||||| |||| | |||| ||||| ||||||||| Sbjct 62810 TTCGTATACCATTTTGAGCA-ATTTTTGCTTTCA---ATTCATTCCAATCCCAAAGATCA 62755 Query 71323 GATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTT----ACTAGCGTATGATCC 71378 | |||| || || || ||| | |||||| Sbjct 62754 GTTGGTGTGCGGTTCCACATATCATATTGTAGAATACCTTTCGATACTGG----TGATCC 62699 Query 71379 TGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCC 71438 | ||||||| || ||||| || |||||| || | ||||||||| || || ||||| || Sbjct 62698 TTCATATGTTTCATATGGGCCAAATTTTTCAGCCAATTCACAACTTGCTTCCAATGCACC 62639 Query 71439 ATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGG 71498 ||||||||| ||||| || || | |||| | | || ||||| | || ||| |||| Sbjct 62638 ATAATAAATTGTTTCAAATATTTGAATATTCATTTGTTTAGCTTCGAGACTTTCATATGG 62579 Query 71499 ATAA---TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCT 71555 |||| ||||| | || || || ||||| ||||| || ||||| || || |||| Sbjct 62578 ATAACGCATTAAG---TTGAATGCATCGGCTAAACCTTGTACACCAATTCCAATCGGTCG 62522 Query 71556 GTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 71615 || | ||| ||| || ||||| || | |||||| ||||| |||| |||||||| Sbjct 62521 ATGACGTAGATTCGAACGTTTCGCTTCCGGTAATGGATAAAAATTACTATCGATAATTTT 62462 Query 71616 ATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCT-CC 71674 || | |||| | |||||||| || | || || ||||| | |||||||| | Sbjct 62461 GTTCAAATTTTTTGTCATTACTTTAACAATTTCTTTGAGTTTATCATAATCAAATGTAAA 62402 Query 71675 CATCTAT-----TACAAACACGT-TCAAGGCAACAGATGCCAGATTACAAACGGCTACCT 71728 | || | ||||| |||| ||| | || || |||| |||||||||||| | | Sbjct 62401 AAGCTTTGGATCGACAAA-ACGTGGCAATGAAATTGAAGCCAAATTACAAACGGCAATTT 62343 Query 71729 CATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 71788 ||| ||| | ||||| | |||||| || |||||||| ||| ||||||||||| | Sbjct 62342 CATCAGCTGATGAATATTCAACAATTTCCGTACAAAGATTTGAACATTTGATGGTTCCCA 62283 Query 71789 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAG 71848 ||||||||||||| || ||||| ||| ||||| | || | |||||||||| Sbjct 62282 AATTTTGTTGATTTGATTTACGATTACAATGATCTTTATATACCATGTATGGAGTACCAG 62223 Query 71849 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGT 71908 ||||||| || | || | ||| || ||| | | | || || | | | | Sbjct 62222 TTTCAATTTGTGCATCCAAAATGGCAAACCATAAATCATGTGCTTTCACTTGTGACCGAT 62163 Query 71909 ATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATT-G 71967 | | ||| | || |||||| ||||| |||||| || || |||||| |||| Sbjct 62162 AACGACCTTCACGCTCATATTGTTCATATAGCTTTTCGAATTCTTCACCCCAA-CATTCA 62104 Query 71968 TCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTT--ACTC 72025 | | ||| ||||||||||| |||||||||||||||||| ||||| ||||| || | Sbjct 62103 TGAAGTCCGGGACATTCATTTGGACACATCAATGACCACATACCATC--CATTTCAACAC 62046 Query 72026 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCC 72084 |||||||||| | ||| || ||||| | || ||| ||||| || | | | |||| Sbjct 62045 GTTTCATAAACAAATCCGGTATCCACAATGC-ATAGAATAGGTCACGTGCACGTAGCTCT 61987 Query 72085 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 72144 ||| || ||||||||||| ||||| | || || | |||||| | |||||| || ||| Sbjct 61986 TCGGAACCAGTATTCTTTTTTAGATCCAAAAAGGCAAAAATATCTGCATGCCATGGCTCC 61927 Query 72145 AAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 72204 || || || || | | || || ||||| || || ||||| | || | || ||| Sbjct 61926 AAATAGATAGCAAATGCACCTGGACGTTTTCCACCACCTTGATCCACATAACGTGCAGTG 61867 Query 72205 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATA 72264 ||||| | || | |||||||| | | ||||||||| |||||| || || | ||| Sbjct 61866 TTATTGAATACACGTAACATTGGTACTAAACCATTGGAAAAACCATTCGTACCAGCAATA 61807 Query 72265 TAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAG 72322 || ||| | |||||| | || ||| || || || || || || ||| | Sbjct 61806 TATGAACCATGTGAACGAATACAATGAACATT--AAGGCCAATACCACCGGCAGATTTCG 61749 Query 72323 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA-TG 72381 | || | ||| ||| |||| || |||||||||||||| || || |||||||| || || Sbjct 61748 AAATAATTGCACATTGTTTCAATGTATCATAGATGCCTTCAATGCTATCATCGCCCATTG 61689 Query 72382 TTAAGTAGAAAACAGCTAGACATTTGGTGACG 72413 | || ||||| || | |||||||| |||| Sbjct 61688 TCAATAAGAAACAAGAT-GACATTTGTGGACG 61658 Score = 127 bits (140), Expect = 3e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 72426 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTC 72485 ||| || || ||||| || || || ||||||||| ||| |||| ||||| || || || Sbjct 61565 ATTGAACAATGTAGGTGATGCATGTGTAAACCATCCTTCGGACATAAGATTATATGTTTC 61506 Query 72486 AATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTG 72545 || |||| || ||||| || ||| || || || || |||||||| |||||||| || Sbjct 61505 GATTGCTGCATCAATATCATCTTTATGAATACCAACGGCAACACGCATCAACATATGTTG 61446 Query 72546 AGGTCTTTCAACGATCTTGTT-ATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAA 72604 || | |||||| | ||| || | ||||||||||| || || | ||| ||||| | Sbjct 61445 TGGACGTTCAAC-AGCTTTTTGACCAATTTTCAACAAATACGAACGATACAATGTTTTGA 61387 Query 72605 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 72653 |||||||||| ||| || | | ||||| || ||||| || | ||||| Sbjct 61386 AACCAAAATAATTGAATCGATAATCTCGATCATAAATGATCGCTGAATT 61338 >seq1705 Length=717327 Score = 432 bits (478), Expect = 5e-116 Identities = 645/908 (71%), Gaps = 13/908 (1%) Strand=Plus/Plus Query 41759 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCT 41818 ||||| || || ||||||| ||||| | |||||||||||||||||||| | || ||| Sbjct 625432 GACATGACACCACTTTTTTGATATTCGGCAACACGTTTTTCGAAAAAATTTGATTTACCT 625491 Query 41819 TCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAAT 41878 |||||||| || | |||||| || ||||| ||||||| |||||| ||||| | | Sbjct 625492 TCCAATGAAATTTGTTCCATAAATTCAAATGGATTGGCCGTTTTATAATGTTTTTCACAA 625551 Query 41879 CCCAATTC-AGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACA 41937 |||||| | ||| || | |||||| |||| ||||| ||| | || | Sbjct 625552 TTCAATTCTACCAATAAA-CGATCTGCACAATATTCAATATAATCGGACATTAATTTTGA 625610 Query 41938 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGAC 41997 |||||| || || | | |||||| | || | || | ||||| |||||||| || || Sbjct 625611 ATTCATGCCAATCAATGAAACTGGTAATGCATCGGTCAAGAATTCCTGTTCAATCGATAC 625670 Query 41998 CGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGA----TACAATAAATGTT 42053 || || | |||||| || || || || | |||| ||| | | ||| | Sbjct 625671 AGCATCGATAATAATA--TCA-ACAATTCGTTGTGGTGATGGACGATTACGA-ATATGGT 625726 Query 42054 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGG 42113 ||||| || ||||| ||||| || || | || ||||| | ||| ||||| || | Sbjct 625727 GAAACAATAAGCATGCAAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATTCG 625786 Query 42114 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATC 42173 |||| || || || ||||| |||||||| |||||||||||||| || | |||||||| | Sbjct 625787 AAAATGTAAGACCAGGCATGAGGCCACGTTTTTTAAGCCAAAAAATTGCGGCAAATGAAC 625846 Query 42174 CAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGG 42230 ||||||| ||||||||||| || || ||||| ||||| | | || | | | | | Sbjct 625847 CAGAAAAAAAGATTCCTTCAACGGCTGCAAATGCAATCAAACGTTCAGCGAATGTAACTG 625906 Query 42231 CACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 42290 | || || |||| | |||||| | || || |||| ||||||||| | | Sbjct 625907 AATCATCCTGGGTCCAACGTATAGCCCATTTAGCTTTTTTTTCTACACAAGGTAAATTAC 625966 Query 42291 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAA 42350 ||||||||| || ||| | | || |||| ||| ||| |||||||||| |||||| | Sbjct 625967 GTATGGCATTGAATAGAAAATCTTGTTCACTACGATCCGATACATATGTATTGATCAATA 626026 Query 42351 GACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGG 42410 ||||||||||||||||| ||||||||||| || ||||| || || ||||| | | Sbjct 626027 ATGAATACATTTCTGAATGAACATTTTCAATGGCAATTTGAAAGCCATAAAAACAACGTG 626086 Query 42411 CCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGT 42470 | || | | ||||| || | ||| ||||| || | |||||| || || || || | Sbjct 626087 CTTCTGGTATTTGTACATCACGAATAAAACGTTCGGCCAGATTTTCATTGACAATACCAT 626146 Query 42471 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATT 42530 | || || |||||||| |||||||||||| | || |||| |||||| | | | |||| Sbjct 626147 CGCTTGCAGCAAAAAATGCCAATACATGTGTAATGAAATGTTTTTCATTTGCATTCAATT 626206 Query 42531 TATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTT 42590 |||||||| ||||| | || ||| |||||||| || ||||| |||||||||| Sbjct 626207 GATTCCAATGGGCAATATCACGACTTAGATCCACTTCTTCAACTGTCCAGAATGATGCTT 626266 Query 42591 CTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTAT 42650 | || ||||||||||| |||| || ||||||||||||||||| || | |||||| | || Sbjct 626267 CAGCTTTTTTATACATGATCCAAATGTCATGATATTGAATTGGAAACAAAACAAAACGAT 626326 Query 42651 TTGGATTT 42658 |||||||| Sbjct 626327 TTGGATTT 626334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671124887956560