Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1705 141 9e-29 seq1489 141 9e-29 seq1658 140 3e-28 seq1123 102 8e-17 >seq1705 Length=717327 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || |||| |||||| || | ||| | |||||||||||||| ||||| ||||| Sbjct 502199 CCACCACGTAGACGCAAGACAAGATGGAGAGTAGATTCTTTTTGGATGTTATAATCAGAT 502140 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| | ||||| ||||||||||||||| | |||| ||||||||||| || || Sbjct 502139 AATGTACGGCCATCTTCAAGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCTGGTGGG 502080 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || |||||||| || |||||| ||| | | ||| | |||||||| ||||| ||| Sbjct 502079 ATACCTTCTTTATCTTGGATTTTTGCTTTCACATTTTCAATCGTGTCCGATGGTTCGACT 502020 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | ||||| || || || ||||| || || ||||||||| Sbjct 502019 TCCAATGTAATAGTCTTACCAGTTAAGGTTTTGACAAAAATTTGCATA 501972 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || |||| ||| || || | ||| | || ||||||||||| || || ||||| ||| Sbjct 502427 CCACCACGTAGACGTAAGACAAGATGGAGGGTGGATTCTTTTTGGATATTATAATCACTC 502368 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| | ||||| | |||||||| ||| |||||| ||||||||||| || || Sbjct 502367 AATGTTCGGCCATCTTCCAACTGTTTACCGGCAAAGATCAACCGTTGCTGATCTGGTGGG 502308 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| |||||| ||| | | ||| | || || | || || ||| Sbjct 502307 ATACCTTCTTTGTCCTGAATTTTAGCTTTCACATTTTCAATGGTATCGGATGGCTCGACT 502248 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | |||||||||||||||||||| || || ||||||||| Sbjct 502247 TCCAATGTAATGGTCTTGCCGGTCAATGTTTTGACAAAAATTTGCATA 502200 Score = 132 bits (146), Expect = 5e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||| || | ||| | || |||||||| || |||||||||||| || || | Sbjct 502871 CGCAGTACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAATCGGACAAAGTACGGCCA 502812 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| | ||||||||| ||| | |||| ||||||||||| || || || ||||||||| Sbjct 502811 TCTTCCAATTGTTTACCGGCAAAAATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTG 502752 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || |||||| ||||| | ||| | || |||| ||||| ||||| | || | Sbjct 502751 TCTTGAATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCCACTTCCAAGGTGATT 502692 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || || || ||||| ||||||||||||||||||||| Sbjct 502691 GTTTTACCAGTCAAAGTTTTTACGAATATTTGCATA 502656 Score = 111 bits (122), Expect = 2e-19 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 || || || | ||||| || ||||| ||||| |||||||||||| || || |||| Sbjct 501959 CGTAATACGAGATGAAGGGTGGATTCCTTTTGGATGTTGTAATCGGACAAAGT--TCGAC 501902 Query 143030 --TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTT 143087 || || | ||| || |||||| |||||| |||||||| || || || || ||||||| Sbjct 501901 CATCCTCCAATTGCTTTCCAGCAAAGATCAATCGTTGCTGGTCTGGTGGGATACCTTCTT 501842 Query 143088 TGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCA 143147 | || ||||| ||| | | ||| | ||||| | ||||| ||||| | || | Sbjct 501841 TATCTTGGATTTTAGCTTTGACATTTTCAATAGTGTCAGATGGTTCCACTTCCAATGTAA 501782 Query 143148 CCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || || || ||||||||||| ||||| |||||||| Sbjct 501781 TGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCAT 501745 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| || || | ||| | || ||||||||||| ||||||||||| ||| Sbjct 502655 CCACCACGAAGACGTAACACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACTC 502596 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | ||||| | |||||||| ||| | |||| || |||||||| || || Sbjct 502595 AAGGTTCGGCCATCTTCCAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTGGG 502536 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || |||||||| || |||||| ||| | | ||| | || || | || || ||| Sbjct 502535 ATTCCTTCTTTATCTTGAATTTTGGCTTTCACATTTTCGATTGTATCTGATGGCTCAACT 502476 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | || || || ||||| || || ||||| ||||||||| Sbjct 502475 TCCAATGTAATTGTTTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 502428 Score = 95.1 bits (104), Expect = 1e-14 Identities = 99/128 (77%), Gaps = 4/128 (3%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || |||| |||||| || ||||| | ||||||||| ||||| || || |||||| | Sbjct 501743 CCACCACGTAGACGCAATACCAAATGCAATGTAGATTCCTTTTGAATATTATAATCGGAC 501684 Query 143018 ATTGTGCTCGAG--TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075 | || |||| ||||| | |||||| |||||| |||||| |||||||||||| || | Sbjct 501683 AAAGT--TCGACCATCTTCTAATTGTTTGCCAGCAAAGATCAAACGTTGCTGATCTGGTG 501626 Query 143076 GTATGCCT 143083 | || ||| Sbjct 501625 GAATACCT 501618 >seq1489 Length=23360 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || |||| |||||| || | ||| | |||||||||||||| ||||| ||||| Sbjct 5790 CCACCACGTAGACGCAAGACAAGATGGAGAGTAGATTCTTTTTGGATGTTATAATCAGAT 5849 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| | ||||| ||||||||||||||| | |||| ||||||||||| || || Sbjct 5850 AATGTACGGCCATCTTCAAGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCTGGTGGG 5909 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || |||||||| || |||||| ||| | | ||| | |||||||| ||||| ||| Sbjct 5910 ATACCTTCTTTATCTTGGATTTTTGCTTTCACATTTTCAATCGTGTCCGATGGTTCGACT 5969 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | ||||| || || || ||||| || || ||||||||| Sbjct 5970 TCCAATGTAATAGTCTTACCAGTTAAGGTTTTGACAAAAATTTGCATA 6017 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || |||| ||| || || | ||| | || ||||||||||| || || ||||| ||| Sbjct 5562 CCACCACGTAGACGTAAGACAAGATGGAGGGTGGATTCTTTTTGGATATTATAATCACTC 5621 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| | ||||| | |||||||| ||| |||||| ||||||||||| || || Sbjct 5622 AATGTTCGGCCATCTTCCAACTGTTTACCGGCAAAGATCAACCGTTGCTGATCTGGTGGG 5681 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| |||||| ||| | | ||| | || || | || || ||| Sbjct 5682 ATACCTTCTTTGTCCTGAATTTTAGCTTTCACATTTTCAATGGTATCGGATGGCTCGACT 5741 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | |||||||||||||||||||| || || ||||||||| Sbjct 5742 TCCAATGTAATGGTCTTGCCGGTCAATGTTTTGACAAAAATTTGCATA 5789 Score = 132 bits (146), Expect = 5e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||| || | ||| | || |||||||| || |||||||||||| || || | Sbjct 5118 CGCAGTACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAATCGGACAAAGTACGGCCA 5177 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| | ||||||||| ||| | |||| ||||||||||| || || || ||||||||| Sbjct 5178 TCTTCCAATTGTTTACCGGCAAAAATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTG 5237 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || |||||| ||||| | ||| | || |||| ||||| ||||| | || | Sbjct 5238 TCTTGAATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCCACTTCCAAGGTGATT 5297 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || || || ||||| ||||||||||||||||||||| Sbjct 5298 GTTTTACCAGTCAAAGTTTTTACGAATATTTGCATA 5333 Score = 111 bits (122), Expect = 2e-19 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA- 143028 || || || | ||||| || ||||| ||||| |||||||||||| || || |||| Sbjct 6030 CGTAATACGAGATGAAGGGTGGATTCCTTTTGGATGTTGTAATCGGACAAAGT--TCGAC 6087 Query 143029 -GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTT 143087 || || | ||| || |||||| |||||| |||||||| || || || || ||||||| Sbjct 6088 CATCCTCCAATTGCTTTCCAGCAAAGATCAATCGTTGCTGGTCTGGTGGGATACCTTCTT 6147 Query 143088 TGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCA 143147 | || ||||| ||| | | ||| | ||||| | ||||| ||||| | || | Sbjct 6148 TATCTTGGATTTTAGCTTTGACATTTTCAATAGTGTCAGATGGTTCCACTTCCAATGTAA 6207 Query 143148 CCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || || || ||||||||||| ||||| |||||||| Sbjct 6208 TGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCAT 6244 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| || || | ||| | || ||||||||||| ||||||||||| ||| Sbjct 5334 CCACCACGAAGACGTAACACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACTC 5393 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | ||||| | |||||||| ||| | |||| || |||||||| || || Sbjct 5394 AAGGTTCGGCCATCTTCCAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTGGG 5453 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || |||||||| || |||||| ||| | | ||| | || || | || || ||| Sbjct 5454 ATTCCTTCTTTATCTTGAATTTTGGCTTTCACATTTTCGATTGTATCTGATGGCTCAACT 5513 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | || || || ||||| || || ||||| ||||||||| Sbjct 5514 TCCAATGTAATTGTTTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 5561 Score = 95.1 bits (104), Expect = 1e-14 Identities = 99/128 (77%), Gaps = 4/128 (3%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || |||| |||||| || ||||| | ||||||||| ||||| || || |||||| | Sbjct 6246 CCACCACGTAGACGCAATACCAAATGCAATGTAGATTCCTTTTGAATATTATAATCGGAC 6305 Query 143018 ATTGTGCTCGAG--TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075 | || |||| ||||| | |||||| |||||| |||||| |||||||||||| || | Sbjct 6306 AAAGT--TCGACCATCTTCTAATTGTTTGCCAGCAAAGATCAAACGTTGCTGATCTGGTG 6363 Query 143076 GTATGCCT 143083 | || ||| Sbjct 6364 GAATACCT 6371 >seq1658 Length=21299 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | |||||| || | ||| | |||||||||||||| || || ||||| ||| Sbjct 17860 CCACCACGAAGACGCAACACAAGATGGAGAGTAGATTCTTTTTGGATATTATAATCACTC 17801 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| || ||||| | ||||||||| ||| | |||| |||||| ||||| || || Sbjct 17800 AATGTTCTGCCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGTTGATCTGGTGGA 17741 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| ||||| ||| | | ||| | || || | || || ||| Sbjct 17740 ATTCCTTCTTTGTCCTGGATTTTAGCTTTCACGTTTTCAATGGTATCTGATGGCTCGACT 17681 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | || ||||||||||||||||| || || |||||||| Sbjct 17680 TCCAAAGTAATGGTTTTGCCGGTCAATGTTTTGACAAAAATTTGCAT 17634 Score = 132 bits (146), Expect = 5e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||| || | ||| | || |||||||| || |||||||||||| || || | Sbjct 18305 CGCAGTACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAATCGGACAAAGTACGGCCA 18246 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| | ||||||||| ||| | |||| ||||||||||| || || || ||||||||| Sbjct 18245 TCTTCCAATTGTTTACCGGCAAAAATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTG 18186 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || |||||| ||||| | ||| | || |||| ||||| ||||| | || | Sbjct 18185 TCTTGAATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCCACTTCCAAGGTGATT 18126 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || || || ||||| ||||||||||||||||||||| Sbjct 18125 GTTTTACCAGTCAAAGTTTTTACGAATATTTGCATA 18090 Score = 114 bits (126), Expect = 1e-20 Identities = 164/230 (71%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || |||| ||| || || | ||| | || ||||| ||||| ||||| || || Sbjct 17633 GCCACCACGTAGACGTAAGACAAGATGGAGAGTGGATTCCTTTTGGATGTTATAGTCAGA 17574 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||| | ||||| ||||||||||||||| | |||| ||||||||||| || || Sbjct 17573 TAATGTACGGCCATCTTCAAGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCTGGTGG 17514 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || ||||| || |||||| ||| | | ||| | |||||||| ||||| || Sbjct 17513 AATACCCTCTTTATCTTGGATTTTTGCTTTCACATTTTCAATCGTGTCCGATGGTTCGAC 17454 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTT-GCATA 143185 ||| | || | ||||| || || || ||||| || || |||| ||||| Sbjct 17453 TTCCAGTGTAATAGTCTTACCAGTTAAGGTTTTGACAAAGATTTGGCATA 17404 Score = 113 bits (124), Expect = 5e-20 Identities = 163/229 (71%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | |||||| || | ||| | || ||||||||||| ||||||||||| ||| Sbjct 18089 CCACCACGAAGACGCAACACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACTC 18030 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | ||||| | |||||||| ||| | |||| || |||||||| || || Sbjct 18029 AAGGTTCGGCCATCTTCCAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTGGG 17970 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTT-AGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || |||||||| || |||||| |||| | | ||| | || || | || || || Sbjct 17969 ATTCCTTCTTTATCTTGAATTTTGGCTTTTCACATTTTCGATTGTATCTGATGGCTCAAC 17910 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | || | || || || ||||| || || ||||||||||||||| Sbjct 17909 TTCCAATGTAATTGTTTTACCAGTCAAAGTCTTGACGAATATTTGCATA 17861 Score = 107 bits (118), Expect = 2e-18 Identities = 155/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 || || || | ||||| || ||||||||||| ||||||||||| || || |||| Sbjct 17391 CGTAATACAAGATGAAGGGTGGATTCTTTTTGAATGTTGTAATCAGACAAAGT--TCGAC 17334 Query 143030 --TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTT 143087 || || | ||| || || ||| |||||| ||||||||||| || || || ||||||| Sbjct 17333 CATCCTCCAATTGCTTTCCGGCAAAGATCAACCGTTGCTGATCTGGTGGGATACCTTCTT 17274 Query 143088 TGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCA 143147 |||| ||||| ||| | | ||| | ||||||| ||||| ||||| | || | Sbjct 17273 TGTCTTGGATTTTAGCTTTGACATTTTCAATAGTGTCCGATGGTTCCACTTCCAATGTAA 17214 Query 143148 CCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || || || || || ||||| || || |||||||| Sbjct 17213 TGGTTTTACCAGTTAAGGTTTTGACAAAAATTTGCAT 17177 Score = 104 bits (114), Expect = 2e-17 Identities = 101/128 (79%), Gaps = 4/128 (3%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || |||| |||||| || ||||| | ||||||||||||||| || ||||||||| | Sbjct 17175 CCACCACGTAGACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCGGAC 17116 Query 143018 ATTGTGCTCGAG--TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075 | || |||| ||||| | |||||| |||||| |||||| |||||||||||| || | Sbjct 17115 AAAGT--TCGACCATCTTCTAATTGTTTGCCAGCAAAGATCAAACGTTGCTGATCTGGTG 17058 Query 143076 GTATGCCT 143083 | || ||| Sbjct 17057 GAATACCT 17050 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||| || | ||| | || ||||| | ||| ||||||||||| ||||| |||||| | Sbjct 16875 CCTCCACGAAGACGAAGTACCAAATGCAATGTCGATTCTTTTTGAATGTTATAATCGGAC 16816 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| | ||||| | |||||| |||||| |||||| ||||||||||| || || Sbjct 16815 AATGTACGGCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCGTTGCTGATCTGGTGGA 16756 Query 143078 ATGCCT 143083 || ||| Sbjct 16755 ATACCT 16750 >seq1123 Length=366939 Score = 102 bits (112), Expect = 8e-17 Identities = 437/681 (64%), Gaps = 26/681 (4%) Strand=Plus/Plus Query 156767 GCCAGTTCGTAACTGGCCTCGAGCGCAGCATGATACACAGTTTCAGCAATTTGTTTATT- 156825 |||| ||| |||| || || | ||| ||| ||| | |||||| ||| || |||| Sbjct 23753 GCCAATTCACAACTTGCTTCTAATGCACCATAATAAATTGTTTCAAAAATCTGAATATTG 23812 Query 156826 --CAATAGAACGGCAGCATCGCTCACGTACGGTATGCGCAACATAACAAATGCATCGGCC 156883 |||| || || | || || |||| || |||| | || |||||||||||| Sbjct 23813 AGCAATCGA---GCTTCTTCACTTTCGTATGGATAACGCATTAGAATGAATGCATCGGCC 23869 Query 156884 AAACCTTGAATGCCAATGCCGATGGGACGATGGCGCATATTAGAtttttttGCAGTTTCA 156943 |||||||||| || || || || || ||||| || | ||| || | | ||| || | Sbjct 23870 AAACCTTGAACACCGATACCTATCGGTCGATGACGAAGATTCGAATATCGTGC--TTCCG 23927 Query 156944 ATAGGGTAGAA--ATTGCGATCAATAATTTTATTCAAACTATCCACT-ACATGTTTGACC 157000 || || | || | | |||||||| ||| || | | || | | | ||| ||| || Sbjct 23928 GTACGGGATAATAAGTAACATCAATAACTTTGTTTAGATTA-CGAGTGACAACTTTAACA 23986 Query 157001 ACAGTGTGCAATAGTTGAAAATCAAAAGTATCATTATT--GAT----ATATTTATTGACG 157054 | | | |||| || ||||||| | | ||| || ||| | |||| || | Sbjct 23987 ATCGATTTCAATTTTTTAAAATCATAGATTCGATTTTTATGATCAACAAATTTGTTCAAA 24046 Query 157055 GCAATCGACGCTAGATTACATACGGCAGTTTCGTCGGGCGCGCAATATTGTACTATTTCC 157114 |||||||| |||| |||||| || ||| |||| || | |||||| || || ||| Sbjct 24047 GCAATCGAGGCTAAATTACAGACAGCAATTTCATCTTTAGATGAATATTCCACAATCTCC 24106 Query 157115 GCACACAAATTGCTGCATTTTATCAATCCGCAATTACTTTGATTGCTTTTGCGGTTGCAA 157174 | ||| | ||| ||||| || || ||| |||||| ||| || || ||| Sbjct 24107 GTACAAAGATTAGAACATTTGATTGTACCAAGATTTTGTTGATTTGATTTACGATTACAA 24166 Query 157175 GCGTCCTTGTATAACATGTACGGTGTGCCGGTTTCGGCTTGAATTTCTATGATGTTGCGC 157234 ||||| || | ||| ||||||||||| |||||| ||| ||| || ||| | Sbjct 24167 TGATCCTTATAAACCATATACGGTGTGCCAGTTTCGATTTGTGATTCAATAATG--GAAA 24224 Query 157235 ATTAATGTAACCGCGGGCA----TTTGCTCGCGAAACTGGCCTTTATCCTCGTAATGTTT 157290 | || | | | || ||| ||| ||| | | || || || ||||||| Sbjct 24225 ACCAAAG--ATCACGAGCACGACATTGTGATCGATATCGTTTTTCATTTTCATAATGTTC 24282 Query 157291 GTACCAGTATTCAAAGTCATCACCATACGTATCGTTGAGCTTAGGACACTCGTTAGGACA 157350 || | |||||| || ||||| | ||| | ||||||||| || ||||| Sbjct 24283 ATATAGCTTTTCAAATTCTTCACCCCAACAATCAAATAATCCAGGACACTCATTCGGACA 24342 Query 157351 CATTAATGACCATATACCGTTTTCTTCAACGCGTTTCATAAATATATCGGGAACCCATAA 157410 ||| |||||||| || | | || || || |||||||| |||| ||| |||| ||| | Sbjct 24343 CATCAATGACCACATTGCATCTTGATCCACACGTTTCATGAATAAATCAGGAATCCAAAG 24402 Query 157411 AGCGTTCATCAAATCACGCGC 157431 || | | |||||||| || Sbjct 24403 GGCATAAAATAAATCACGTGC 24423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507003587917920