Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq206 161 1e-34 >seq206 Length=237414 Score = 161 bits (178), Expect = 1e-34 Identities = 295/430 (69%), Gaps = 14/430 (3%) Strand=Plus/Plus Query 7053 TATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAA 7112 |||| | | |||||||||||| | || | || || | |||||| ||||||||||| | Sbjct 141852 TATACCTGTTGGATTCCAAGCCGATATAATCATTCGACGATCATTCGGATTTGTTTTGAT 141911 Query 7113 TTTTGTTATAATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATT 7172 | |||| || ||||||||| | ||| ||| | | ||||| | || | Sbjct 141912 CGTATGGATAAGCTGTTTTAATTGATCAACACCTTGAGCATTATAATCGGAATTTTTGTC 141971 Query 7173 TATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTC 7232 | ||| | || |||||||||||||||||||| ||||| | ||||||| ||||||||| Sbjct 141972 TCGATATTCGGCACCAAAATGTCTCCATTGAAAACCATATACTGGACCTAGATCACCTTC 142031 Query 7233 TTCACGATGATTAAATCCTA----ATCGATTTAAATTAGATTTTGATCCATAAGCATCCC 7288 || ||||| ||| || | ||||| ||||| | |||||||| ||||||| Sbjct 142032 TTGACGATCGGCAAACCCAAGGCTATCGAG--AAATTC--TCGTGATCCATTTGCATCCC 142087 Query 7289 AAATATGTACAGAtttttttGATAAATTTAAAGAATTTGTAGATCCTTTAAGGAACCATA 7348 | || | |||| ||||| || | ||| || | || ||||||| || ||||||| Sbjct 142088 AGATTTTTACACCTTTTTCAGACAGCTTTTTCGAGTCAGTTGATCCTTGTAGAAACCATA 142147 Query 7349 AAAGTTCTTCTACTATTCCACGCCAAAACATTCTTTTTGTAGTGAATAAAGGGAATGT-- 7406 ||| ||||| || | ||||||||||| | | ||||||||||| || || ||||| Sbjct 142148 GAAGCTCTTCGACAACACCACGCCAAAATACACGTTTTGTAGTGATCAATGGTAATGTTT 142207 Query 7407 ----ACTTAAATCATATCTATTCTGTAAACCAAATACTGAAAGAGTACCTGTTCCAGTTC 7462 || | ||| | | | ||| |||||| || |||| ||||| ||||| || | Sbjct 142208 GATCACGAAGTGAATAACGACTTTGTGTACCAAACACCGAAAATGTACCAGTTCCTGTAC 142267 Query 7463 TATCAATTTT 7472 ||| |||| Sbjct 142268 GGTCATTTTT 142277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595859293029600