Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1658 122 8e-23 seq1705 120 3e-22 seq1489 120 3e-22 >seq1658 Length=21299 Score = 122 bits (134), Expect = 8e-23 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||||||| | || | ||||||||| ||||| | |||||||| |||| || || | Sbjct 17848 CGCAACACAAGATGGAGAGTAGATTCTTTTTGGATATTATAATCACTCAATGTTCTGCCA 17789 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||| ||||| ||| |||| || || | ||| |||||||| ||||| ||||||||| Sbjct 17788 TCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTTG 17729 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||||| || || ||| | | || || | | ||||| || | || ||| Sbjct 17728 TCCTGGATTTTAGCTTTCACGTTTTCAATGGTATCTGATGGCTCGACTTCCAAAGTAATG 17669 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||| || || | ||||| ||||| || ||||||| Sbjct 17668 GTTTTGCCGGTCAATGTTTTGACAAAAATTTGCATGC 17632 Score = 114 bits (126), Expect = 1e-20 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868 || ||||| ||||| | ||| ||||| || ||| | || |||||||| || |||| Sbjct 17373 GTGGATTCTTTTTGAATGTTGTAATCAGACAAAGT--TCGACCATCCTCCAATTGCTTTC 17316 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 || ||||||| || | |||||||||||| || |||||||||||||| | ||||| || | Sbjct 17315 CGGCAAAGATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGTCTTGGATTTTAGCTT 17256 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 |||| | | |||||| | | || || || | || |||||||| ||||| | | Sbjct 17255 TGACATTTTCAATAGTGTCCGATGGTTCCACTTCCAATGTAATGGTTTTACCAGTTAAGG 17196 Query 94989 TTTTCACAAAGATCTGCAT 95007 |||| ||||| || ||||| Sbjct 17195 TTTTGACAAAAATTTGCAT 17177 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/216 (70%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||||||| | || | ||| ||||| ||||| | ||| ||||| |||| || | | Sbjct 18077 CGCAACACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACTCAAGGTTCGGCCA 18018 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||| |||||| ||| |||| || |||| ||||||||||| || || |||||||| Sbjct 18017 TCTTCCAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTGGGATTCCTTCTTTA 17958 Query 94913 TCATAAATTTTTGC-CTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | |||||| || || || ||| || || | | || || || | || || Sbjct 17957 TCTTGAATTTTGGCTTTTCACATTTTCGATTGTATCTGATGGCTCAACTTCCAATGTAAT 17898 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| ||||| | ||| || || || || ||||| Sbjct 17897 TGTTTTACCAGTCAAAGTCTTGACGAATATTTGCAT 17862 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || ||||| || || | ||| |||||| || ||| | ||| |||| ||||| ||| Sbjct 18287 GTGGATTCTTTCTGAATGTTGTAATCGGACAAAGTACGGCCATCTTCCAATTGTTTACCG 18228 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 |||| || || | |||||||||||| || |||||||||||||| | |||||| || || Sbjct 18227 GCAAAAATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGTCTTGAATTTTAGCTTTT 18168 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | | || || | | || || || | ||||| ||||| ||||| | |||| Sbjct 18167 ACATTTTCAATGGTATCCGATGGTTCCACTTCCAAGGTGATTGTTTTACCAGTCAAAGTT 18108 Query 94991 TTCACAAAGATCTGCAT 95007 || || || || ||||| Sbjct 18107 TTTACGAATATTTGCAT 18091 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/206 (71%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGAATCCTCC 94858 |||| || | ||| ||||||||||| | |||||| || | | || || | ||| || Sbjct 17613 CAAGATGGAGAGTGGATTCCTTTTGGATGTTATAGTCAGATAAT-GTACGGCCATCTTCA 17555 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || ||||| || |||| || |||| |||||||||||| |||||||| ||||| || | Sbjct 17554 AGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCTGGTGGAATACCCTCTTTATCTTGG 17495 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 |||||||| || || | | ||||| | | ||||| || | || || || || Sbjct 17494 ATTTTTGCTTTCACATTTTCAATCGTGTCCGATGGTTCGACTTCCAGTGTAATAGTCTTA 17435 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTG 95004 ||||| | ||||| |||||||| || Sbjct 17434 CCAGTTAAGGTTTTGACAAAGATTTG 17409 Score = 91.5 bits (100), Expect = 1e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| ||||| || ||||| ||||| | |||||||||| || || | ||| ||| Sbjct 16857 ACCAAATGCAATGTCGATTCTTTTTGAATGTTATAATCGGACAATGTACGGCCATCTTCC 16798 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCT 94906 | |||||||| ||||||| |||| |||||||||||| ||||||||| Sbjct 16797 AATTGTTTTCCAGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCT 16750 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/141 (74%), Gaps = 4/141 (3%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||| || | | ||||| ||||| ||||| |||||||| ||||| | Sbjct 17188 AAAAATTTGCATTCCACCACGTAGACGCAATACCAAATGCAATGTAGATTCTTTTTGAAT 17129 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 || |||||| || ||| | || ||| || | ||||| || ||||||| || | | Sbjct 17128 ATTGTAATCGGACAAAGT--TCGACCATCTTCTAATTGTTTGCCAGCAAAGATCAAACGT 17071 Query 94886 TGCTGATCTGGAGGAATACCT 94906 ||||||||||| ||||||||| Sbjct 17070 TGCTGATCTGGTGGAATACCT 17050 >seq1705 Length=717327 Score = 120 bits (132), Expect = 3e-22 Identities = 173/242 (71%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || || | | ||| || || | || | || ||||||||||| | Sbjct 501984 AAAAATTTGCATACCACCACGAAGTCGTAATACGAGATGAAGGGTGGATTCCTTTTGGAT 501925 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||| |||||| || ||| | || |||||||| || ||||| ||||||| |||| | Sbjct 501924 GTTGTAATCGGACAAAGT--TCGACCATCCTCCAATTGCTTTCCAGCAAAGATCAATCGT 501867 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 ||||| ||||| || ||||||||||| || | ||||| || ||||| | | |||| Sbjct 501866 TGCTGGTCTGGTGGGATACCTTCTTTATCTTGGATTTTAGCTTTGACATTTTCAATAGTG 501807 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 |||| | || || || | || |||||||| ||||| | |||||||| || || ||| Sbjct 501806 TCAGATGGTTCCACTTCCAATGTAATGGTTTTACCAGTCAATGTTTTCACGAAAATTTGC 501747 Query 95006 AT 95007 || Sbjct 501746 AT 501745 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || ||||| ||||| | |||||||| |||| || | ||| |||| |||||| ||| Sbjct 502397 GTGGATTCTTTTTGGATATTATAATCACTCAATGTTCGGCCATCTTCCAACTGTTTACCG 502338 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| || | |||||||||||| || |||||||||||||| | |||||| || || Sbjct 502337 GCAAAGATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGTCCTGAATTTTAGCTTTC 502278 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | | || || | | ||||| || | || ||||| || || || | ||| Sbjct 502277 ACATTTTCAATGGTATCGGATGGCTCGACTTCCAATGTAATGGTCTTGCCGGTCAATGTT 502218 Query 94991 TTCACAAAGATCTGCAT 95007 || ||||| || ||||| Sbjct 502217 TTGACAAAAATTTGCAT 502201 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGA 94851 ||||| || | || | ||||||||| ||||| | ||||||||| | | || || | Sbjct 502187 CGCAAGACAAGATGGAGAGTAGATTCTTTTTGGATGTTATAATCAGATAAT-GTACGGCC 502129 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| || || ||||| || |||| || |||| |||||||||||| || ||||||||||| Sbjct 502128 ATCTTCAAGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCTGGTGGGATACCTTCTTT 502069 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | |||||||| || || | | ||||| | | ||||| || | || || Sbjct 502068 ATCTTGGATTTTTGCTTTCACATTTTCAATCGTGTCCGATGGTTCGACTTCCAATGTAAT 502009 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| | ||||| ||||| || ||||| Sbjct 502008 AGTCTTACCAGTTAAGGTTTTGACAAAAATTTGCAT 501973 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 || ||||| | || | ||| ||||| ||||| | ||| ||||| |||| || | | Sbjct 502643 CGTAACACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACTCAAGGTTCGGCCA 502584 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||| |||||| ||| |||| || |||| ||||||||||| || || |||||||| Sbjct 502583 TCTTCCAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTGGGATTCCTTCTTTA 502524 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | |||||| || || || ||| || || | | || || || | || || Sbjct 502523 TCTTGAATTTTGGCTTTCACATTTTCGATTGTATCTGATGGCTCAACTTCCAATGTAATT 502464 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| ||||| | ||| || || || || ||||| Sbjct 502463 GTTTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 502429 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || ||||| || || | ||| |||||| || ||| | ||| |||| ||||| ||| Sbjct 502853 GTGGATTCTTTCTGAATGTTGTAATCGGACAAAGTACGGCCATCTTCCAATTGTTTACCG 502794 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 |||| || || | |||||||||||| || |||||||||||||| | |||||| || || Sbjct 502793 GCAAAAATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGTCTTGAATTTTAGCTTTT 502734 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | | || || | | || || || | ||||| ||||| ||||| | |||| Sbjct 502733 ACATTTTCAATGGTATCCGATGGTTCCACTTCCAAGGTGATTGTTTTACCAGTCAAAGTT 502674 Query 94991 TTCACAAAGATCTGCAT 95007 || || || || ||||| Sbjct 502673 TTTACGAATATTTGCAT 502657 Score = 96.9 bits (106), Expect = 3e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| ||||| || ||||| ||||| | |||||||||| || || | ||| ||| Sbjct 501425 ACCAAATGCAATGTCGATTCTTTTTGAATGTTATAATCGGACAATGTACGGCCATCTTCC 501366 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCT 94906 | |||||||| ||||||| ||||||||||||||||| ||||||||| Sbjct 501365 AATTGTTTTCCAGCAAAGATCAATCTTTGCTGATCTGGTGGAATACCT 501318 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/140 (76%), Gaps = 4/140 (3%) Strand=Plus/Minus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || ||| || | | ||||| ||||| ||||| |||||||||||||| | Sbjct 501755 AAAATTTGCATTCCACCACGTAGACGCAATACCAAATGCAATGTAGATTCCTTTTGAATA 501696 Query 94829 TTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886 ||||||||| || ||| | || ||| || | ||||| || ||||||| || | || Sbjct 501695 TTATAATCGGACAAAGT--TCGACCATCTTCTAATTGTTTGCCAGCAAAGATCAAACGTT 501638 Query 94887 GCTGATCTGGAGGAATACCT 94906 |||||||||| ||||||||| Sbjct 501637 GCTGATCTGGTGGAATACCT 501618 >seq1489 Length=23360 Score = 120 bits (132), Expect = 3e-22 Identities = 173/242 (71%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || || | | ||| || || | || | || ||||||||||| | Sbjct 6005 AAAAATTTGCATACCACCACGAAGTCGTAATACGAGATGAAGGGTGGATTCCTTTTGGAT 6064 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||| |||||| || | ||| || |||||||| || ||||| ||||||| |||| | Sbjct 6065 GTTGTAATCGGACAAA--GTTCGACCATCCTCCAATTGCTTTCCAGCAAAGATCAATCGT 6122 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 ||||| ||||| || ||||||||||| || | ||||| || ||||| | | |||| Sbjct 6123 TGCTGGTCTGGTGGGATACCTTCTTTATCTTGGATTTTAGCTTTGACATTTTCAATAGTG 6182 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 |||| | || || || | || |||||||| ||||| | |||||||| || || ||| Sbjct 6183 TCAGATGGTTCCACTTCCAATGTAATGGTTTTACCAGTCAATGTTTTCACGAAAATTTGC 6242 Query 95006 AT 95007 || Sbjct 6243 AT 6244 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || ||||| ||||| | |||||||| |||| || | ||| |||| |||||| ||| Sbjct 5592 GTGGATTCTTTTTGGATATTATAATCACTCAATGTTCGGCCATCTTCCAACTGTTTACCG 5651 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| || | |||||||||||| || |||||||||||||| | |||||| || || Sbjct 5652 GCAAAGATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGTCCTGAATTTTAGCTTTC 5711 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | | || || | | ||||| || | || ||||| || || || | ||| Sbjct 5712 ACATTTTCAATGGTATCGGATGGCTCGACTTCCAATGTAATGGTCTTGCCGGTCAATGTT 5771 Query 94991 TTCACAAAGATCTGCAT 95007 || ||||| || ||||| Sbjct 5772 TTGACAAAAATTTGCAT 5788 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGA 94851 ||||| || | || | ||||||||| ||||| | ||||||||| | | || || | Sbjct 5802 CGCAAGACAAGATGGAGAGTAGATTCTTTTTGGATGTTATAATCAGATAAT-GTACGGCC 5860 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| || || ||||| || |||| || |||| |||||||||||| || ||||||||||| Sbjct 5861 ATCTTCAAGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCTGGTGGGATACCTTCTTT 5920 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | |||||||| || || | | ||||| | | ||||| || | || || Sbjct 5921 ATCTTGGATTTTTGCTTTCACATTTTCAATCGTGTCCGATGGTTCGACTTCCAATGTAAT 5980 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| | ||||| ||||| || ||||| Sbjct 5981 AGTCTTACCAGTTAAGGTTTTGACAAAAATTTGCAT 6016 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 || ||||| | || | ||| ||||| ||||| | ||| ||||| |||| || | | Sbjct 5346 CGTAACACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACTCAAGGTTCGGCCA 5405 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||| |||||| ||| |||| || |||| ||||||||||| || || |||||||| Sbjct 5406 TCTTCCAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTGGGATTCCTTCTTTA 5465 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | |||||| || || || ||| || || | | || || || | || || Sbjct 5466 TCTTGAATTTTGGCTTTCACATTTTCGATTGTATCTGATGGCTCAACTTCCAATGTAATT 5525 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| ||||| | ||| || || || || ||||| Sbjct 5526 GTTTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 5560 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || ||||| || || | ||| |||||| || ||| | ||| |||| ||||| ||| Sbjct 5136 GTGGATTCTTTCTGAATGTTGTAATCGGACAAAGTACGGCCATCTTCCAATTGTTTACCG 5195 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 |||| || || | |||||||||||| || |||||||||||||| | |||||| || || Sbjct 5196 GCAAAAATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGTCTTGAATTTTAGCTTTT 5255 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | | || || | | || || || | ||||| ||||| ||||| | |||| Sbjct 5256 ACATTTTCAATGGTATCCGATGGTTCCACTTCCAAGGTGATTGTTTTACCAGTCAAAGTT 5315 Query 94991 TTCACAAAGATCTGCAT 95007 || || || || ||||| Sbjct 5316 TTTACGAATATTTGCAT 5332 Score = 96.9 bits (106), Expect = 3e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| ||||| || ||||| ||||| | |||||||||| || || | ||| ||| Sbjct 6564 ACCAAATGCAATGTCGATTCTTTTTGAATGTTATAATCGGACAATGTACGGCCATCTTCC 6623 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCT 94906 | |||||||| ||||||| ||||||||||||||||| ||||||||| Sbjct 6624 AATTGTTTTCCAGCAAAGATCAATCTTTGCTGATCTGGTGGAATACCT 6671 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/140 (76%), Gaps = 4/140 (3%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || ||| || | | ||||| ||||| ||||| |||||||||||||| | Sbjct 6234 AAAATTTGCATTCCACCACGTAGACGCAATACCAAATGCAATGTAGATTCCTTTTGAATA 6293 Query 94829 TTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886 ||||||||| || | ||| || ||| || | ||||| || ||||||| || | || Sbjct 6294 TTATAATCGGACAAA--GTTCGACCATCTTCTAATTGTTTGCCAGCAAAGATCAAACGTT 6351 Query 94887 GCTGATCTGGAGGAATACCT 94906 |||||||||| ||||||||| Sbjct 6352 GCTGATCTGGTGGAATACCT 6371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448281640190160