Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1123 529 2e-145 seq1179 452 5e-122 seq1705 439 3e-118 >seq1123 Length=366939 Score = 529 bits (586), Expect = 2e-145 Identities = 1203/1795 (67%), Gaps = 46/1795 (3%) Strand=Plus/Plus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || ||||||||||| || | || | | ||||| |||||||| ||||| ||||| | Sbjct 23486 ACCTGAAATTCTCCGGAAAGAACACGTCTTGTGTATATATTACTTGTATATGGTTCAAAA 23545 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 || ||||| || || | |||||| || || || || || ||||| || || || | ||| Sbjct 23546 GATTCATTGTTCCCAAGAATTTGTGCTGTCGAAGCTGTAGGCATTGGAGCTACAAGCAAA 23605 Query 62457 CTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGAT 62514 ||||||| | ||| ||||| || ||| | |||| | | | ||||||||||||| Sbjct 23606 CTATTTCGTATACC--ATGTTTTGCAATTCGAGCTTTCAAATCGTTCCAATTCCAAAGAG 23663 Query 62515 CCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTA----CTGGCGTACGAT 62570 | ||| | |||||||||| ||| |||| | || Sbjct 23664 ATGTTGGTTGACGATTCCACATGTCAAACTGTAGAATACTTTTAGATACTGGTG----AT 23719 Query 62571 CCTACATATGTATCGTATGGTCC-TTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGC 62629 ||| |||| || || ||||| || || | | ||||| | ||||||||| || |||||||| Sbjct 23720 CCTTCATACGTTTCATATGGACCATTTCGT-TCAGCCAATTCACAACTTGCTTCTAATGC 23778 Query 62630 ACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAA 62689 ||| |||||||| ||||| || |||| |||| || | | ||||| || || | Sbjct 23779 ACCATAATAAATTGTTTCAAAAATCTGAATATTGAGCAATCGAGCTTCTTCACTTTCGTA 23838 Query 62690 TGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCT 62749 ||||||| | ||||| || || || || || ||||||||||| ||||| || |||| Sbjct 23839 TGGATAACGCATTAGAATGAATGCATCGGCCAAACCTTGAACACCGATACCTATCGGTCG 23898 Query 62750 ATGTCTCTTATTAGAGATTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTT 62808 ||| | ||| || || || ||||| || | ||||||||| ||| ||| |||| || Sbjct 23899 ATGACGAAGATTCGA-ATATCGTGCTTCCGGTACGGGATAATAAGTAACATCAATAACTT 23957 Query 62809 TATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC 62865 | || ||||| | ||||| ||||| || | |||| ||| ||||||| | Sbjct 23958 TGTTTAGATTACGAGTGACA---ACTTTAACAATCGATTTCAATTTTTTAAAATCATAGA 24014 Query 62866 GCCCATCTAT------TACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGC-- 62917 | || | | ||||| ||||||| |||| || || | |||||| || || Sbjct 24015 TTCGATTTTTATGATCAACAAATTTGTTCAAAGCAATCGAGGCTAAATTACAGACAGCAA 24074 Query 62918 -TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAG 62976 | | || |||| || | ||||| | ||||| || ||||||||| ||| ||||| | Sbjct 24075 TTTCATCTTTAG-AT--GAATATTCCACAATCTCCGTACAAAGATTAGAACATTTGATTG 24131 Query 62977 TTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAG 63036 | || | |||||||||||| || ||||| ||||||||||| || | || | Sbjct 24132 TACCAAGATTTTGTTGATTTGATTTACGATTACAATGATCCTTATAAACCATATACGGTG 24191 Query 63037 TACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGC-CTTTATTATA 63095 | |||||||| || || ||||| ||||| | ||| | | ||||| | ||| | Sbjct 24192 TGCCAGTTTCGATTTGTGATTCAATAATGGAAAACCAAAGATCACGAGCACGACATTGT- 24250 Query 63096 GATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAA 63155 ||| |||| |||| |||| || || ||| | ||| || || || |||||| Sbjct 24251 GATCGATATCGTTTTTCATTTTCATAATGTTCATATAGCTTTTCAAATTCTTCACCCCAA 24310 Query 63156 ACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC 63215 || ||||||||||| |||| |||||||||||| |||||| | | || | | | Sbjct 24311 CAATCAAATAATCCAGGACACTCATTCGGACACATCAATGACCACATTGCATCTTGATCC 24370 Query 63216 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 63275 || |||||||| || | ||||||||||||||| || ||||| ||| | | | | Sbjct 24371 ACACGTTTCATGAATAAATCAGGAATCCAAAGGGCATAAAATAAATCACGTGCACGTAAT 24430 Query 63276 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63335 || ||| ||| ||||| || ||||| | || | | ||||| |||||||| ||| Sbjct 24431 TCTTCGGATCCGGTATTTTTACGAAGATTTATAAAATCAAAGATATCCGAATGCCATGGT 24490 Query 63336 TCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 63395 || | || ||||| | ||||||| |||||||| || || ||||| | |||| ||| Sbjct 24491 TCTAGATAGATGGCAAATGCTCCAGGACGTTTGTTGCCACCTTGATCAACATATCGAGCC 24550 Query 63396 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAG 63455 || ||||| || || | ||||| |||| | || || || | ||||| ||||||| Sbjct 24551 GTATTATTGTATACACGTAACATAGGAACCAAGCCATTAGAAAATCCATTCGTACCGGCA 24610 Query 63456 ATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63515 ||||| || ||| | || ||| | || ||||| || || || || ||| Sbjct 24611 ATATAACTACCAGAAGATCGGATACAATGAACATTAAGACCAATACCGCCAGCTGATTTT 24670 Query 63516 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATG 63575 || || | || || ||| | || ||||| ||||| || || |||||||| |||| Sbjct 24671 GAAATAATGGCACAATTTTTAAGGGTATCATATATACCTTCAATACTATCATCACTCATA 24730 Query 63576 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 63635 |||| |||||||| || | ||| | || | || || |||||||| || ||||| Sbjct 24731 GTAAGCAGAAAACATGATGATAATTGTGGCCGTTTTGTGCCGGCATTAAACAATGTAGGT 24790 Query 63636 GAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATA 63695 || || || |||||||| ||||| || | || ||| ||||| ||||| || | || ||| Sbjct 24791 GATGCATGTGTAAACCAATTTTCCGAGATTAAATTATACGTTTCAATGGCGGCATCGATA 24850 Query 63696 TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 63755 || |||||| || | || |||||| ||||| || || |||| ||| || | | Sbjct 24851 TCATCACCATGAATACCAATAGCACAACGCATCAACATATGTTGGGGTCGTTCGACAACC 24910 Query 63756 TTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 63815 |||| | ||||| | ||| || | | || ||||| ||||||||||| ||||| Sbjct 24911 TTGTCGCAAATTTTGAGCAAATAACTTCGATATAATGTTTTGAAACCAAAATAATTGTAA 24970 Query 63816 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATA 63875 ||| || || || || || || | || || | || | | | ||| | |||| Sbjct 24971 TTAAAATCACGATCATAGATTATGGCAGAATTAA---TACGTTCAGAATTGGCCATTATA 25027 Query 63876 --TCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAG 63932 | ||| | || || ||||| |||| ||| ||| | | ||| || | Sbjct 25028 ATTTCATAAATTTCTTTCGATATAATTGGAGTGGGTTGACCAGTATGTTCATT--GATCG 25085 Query 63933 TTG--AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTG 63990 ||| ||||||| | || || || || ||| |||||||| || |||| ||||| Sbjct 25086 TTGTATATAAATCATGAATAACATCGGAGAAATTTTTCTTTGTTTCTTTATGTAAATTTG 25145 Query 63991 ATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTG 64050 ||| ||||||| ||||| |||||||||||||| ||||| || || | ||||||| Sbjct 25146 ATATAGCTATTCGAGCGGCAAGAATGGCATAATCAATATGTTCAGTGGTCAATGTGGCTG 25205 Query 64051 CTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCC 64105 | ||||| ||||| | ||||||||| ||||| || ||| ||||| ||| Sbjct 25206 CAATTTCTGCTGCTAATTCATCCAATTCTTTTGTTGTAACACCAGAATATAATCC 25260 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62075 || ||||||||||||| ||| |||||||| ||||| | || || ||| || ||||| Sbjct 23103 GCCGGTTTCGTACGTAAATAATACATTCCGGTTTTCAATCCTGAACGCCAACCAAAAAAA 23162 Query 62076 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62135 ||||| || | ||| | | | | || || || | ||| || || | ||||||||| Sbjct 23163 TGCATTGATGTCAATTTCGTAATATTTGGCTCGGCAAAATGAATGTTTAATGATTGACTT 23222 Query 62136 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 62195 ||||| ||| | || || | || ||||||| | | || || || |||| |||||| Sbjct 23223 TGATCAATGTATGCACCACGATCAACAGCCATCTGGACAATTGTTTTCTGTGATATTTCC 23282 Query 62196 CAAATAGTTTTATA 62209 |||| |||||| || Sbjct 23283 CAAACAGTTTTGTA 23296 >seq1179 Length=350002 Score = 452 bits (500), Expect = 5e-122 Identities = 1099/1647 (67%), Gaps = 41/1647 (2%) Strand=Plus/Minus Query 61986 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 62045 || |||| ||| ||||| || | | ||| ||||| || |||| ||| |||||||| Sbjct 63288 TTATCCACTGTAAATTGTATAGCTTGTGCTGCCGGTTTTGTTCGTAAATAATACATTCCT 63229 Query 62046 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 62105 ||||| | || || |||||| || |||||||| || | ||| | | | || Sbjct 63228 GTTTTCAATCCATTACGCCATCCATAGAAATGCATCGAAGTAATTTTTGCTTTAGATGGT 63169 Query 62106 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62165 || || ||||| | ||| | |||||||||||||| || || || || | || ||| Sbjct 63168 TCAGCCATATGAACATTGAGTGATTGACTTTGATCAATAAATGCACCACGATCAATGGCC 63109 Query 62166 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTT-AATATC 62224 || | | || || ||||| |||||||| | ||| || || | ||||| |||||| Sbjct 63108 ATATCAACAATACATTTCTGTGGTATTTCCCATACAGTCTTGTATAA-CGCTTTAATATC 63050 Query 62225 TTCTGGAA--GGTTTG-TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 62281 || || | | | | ||||||| || || |||| || || || || | | || | Sbjct 63049 ATCCGGTATTGAATCGATATTCTGTATTGAACCACGATTAGCAATGATAATGGTTTTCAA 62990 Query 62282 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 62341 || ||| |||| | | | ||||| | | || | ||| ||||||| || | Sbjct 62989 TTCTTCACTCCAAAGGCCAAGATTGATTAAATCAGTGAGCAAATGTTGATTAACAACATC 62930 Query 62342 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTC 62401 ||| ||||||| ||| | | ||||||||| || ||||| ||||| | || || Sbjct 62929 AAAACTACCAGACATTACACGTCTAGTGTAAATGTTTGATGTATATGGTTCAAATGATTC 62870 Query 62402 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 62461 |||||| || |||||||| || || ||||| || ||||| ||||| || | ||||||||| Sbjct 62869 ATTATTGCCTAAAATTTGTGCTGTAGATGCTGTTGGCATTGGTGCAACAAGTAAACTATT 62810 Query 62462 TCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGAC 62519 || | ||| || || | ||||| |||| | | ||||| ||||||||| | Sbjct 62809 TCGTATACC--ATTTTGAGCAATTTTTGCTTTCAATTCATTCCAATCCCAAAGATCAGTT 62752 Query 62520 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATCCTAC 62575 ||| |||||||||||| || ||||| | ||||| | Sbjct 62751 GGTGTGCGGTTCCACATATCATATTGTAGAATACCTTTCGATACTGGTG----ATCCTTC 62696 Query 62576 ATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTA 62635 |||||| || ||||| || || ||||| | ||||||||| || || |||||||| || Sbjct 62695 ATATGTTTCATATGGGCCAAATTTTTCAGCCAATTCACAACTTGCTTCCAATGCACCATA 62636 Query 62636 ATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATA 62695 |||||| ||||| || || | |||| | | || ||||| || || ||| ||||||| Sbjct 62635 ATAAATTGTTTCAAATATTTGAATATTCATTTGTTTAGCTTCGAGACTTTCATATGGATA 62576 Query 62696 AT---TTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATG 62752 | ||||| | || || || ||||| ||||| |||||||| || || |||| ||| Sbjct 62575 ACGCATTAAGT---TGAATGCATCGGCTAAACCTTGTACACCAATTCCAATCGGTCGATG 62519 Query 62753 TCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT 62812 | ||| || || ||||| || | |||||| ||||| |||| |||||||| || Sbjct 62518 ACGTAGATTCGAACGTTTCGCTTCCGGTAATGGATAAAAATTACTATCGATAATTTTGTT 62459 Query 62813 GAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC 62872 | |||| | |||||||| || | || || ||||| | |||||||| | Sbjct 62458 CAAATTTTTTGTCATTACTTTAACAATTTCTTTGAGTTTATCATAATCAAATGTAAAAAG 62399 Query 62873 TATT------ACAAACATGTT-CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCAT 62925 || ||||| | || ||| | || || |||| |||||||||||| | |||| Sbjct 62398 CTTTGGATCGACAAA-ACGTGGCAATGAAATTGAAGCCAAATTACAAACGGCAATTTCAT 62340 Query 62926 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAAT 62985 ||| | ||||| | || || || |||||||| ||| ||||| ||||| |||| Sbjct 62339 CAGCTGATGAATATTCAACAATTTCCGTACAAAGATTTGAACATTTGATGGTTCCCAAAT 62280 Query 62986 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTT 63045 |||||||||| || ||||| ||| ||||| | ||| ||||||||||||||| Sbjct 62279 TTTGTTGATTTGATTTACGATTACAATGATCTTTATATACCATGTATGGAGTACCAGTTT 62220 Query 63046 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATC 63105 |||| || | || | ||| || ||| | | | || || | | || || | Sbjct 62219 CAATTTGTGCATCCAAAATGGCAAACCATAAATCATGTGCTTTCACTTGTGACCGATAAC 62160 Query 63106 TCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63165 | ||| | || ||| || ||| | |||||| || || |||||| |||| | Sbjct 62159 GACCTTCACGCTCATATTGTTCATATAGCTTTTCGAATTCTTCACCCCAA-CATTCATGA 62101 Query 63166 A-TCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTC-ATCCTTCA-CTCGTT 63222 | ||| |||||||||| ||||||||||| |||||| || || || |||| | |||| Sbjct 62100 AGTCCGGGACATTCATTTGGACACATCAATGACCACATACCATCCAT--TTCAACACGTT 62043 Query 63223 TCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCG 63281 ||||||| | ||| || ||||| | || ||| ||||| || | | | | || ||| Sbjct 62042 TCATAAACAAATCCGGTATCCACAATGC-ATAGAATAGGTCACGTGCACGTAGCTCTTCG 61984 Query 63282 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 63341 || ||||||||||| ||||| | || || | |||||| | |||||| || ||||| Sbjct 61983 GAACCAGTATTCTTTTTTAGATCCAAAAAGGCAAAAATATCTGCATGCCATGGCTCCAAA 61924 Query 63342 TATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 63401 || || || | | || || ||||| || || ||||| | || | || |||||| Sbjct 61923 TAGATAGCAAATGCACCTGGACGTTTTCCACCACCTTGATCCACATAACGTGCAGTGTTA 61864 Query 63402 TTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAG 63461 || | || | |||||||| | | ||| || || | |||||| ||||| | ||||| Sbjct 61863 TTGAATACACGTAACATTGGTACTAAACCATTGGAAAAACCATTCGTACCAGCAATATAT 61804 Query 63462 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63521 ||| | ||||||| | || || || || || || || ||| || || Sbjct 61803 GAACCATGTGAACGAATACAATGAACATTAAGGCCAATACCACCGGCAGATTTCGAAATA 61744 Query 63522 AATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCA-TGTTAAG 63580 | ||| ||| |||| || || |||||||| || || |||||||||||| || ||| || Sbjct 61743 ATTGCACATTGTTTCAATGTATCATAGATGCCTTCAATGCTATCATCGCCCATTGTCAAT 61684 Query 63581 TAGAAAACAGCTAGACATTTGGTGACG 63607 ||||| || | |||||||| |||| Sbjct 61683 AAGAAACAAGAT-GACATTTGTGGACG 61658 Score = 120 bits (132), Expect = 4e-22 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 63620 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC 63679 ||| || || ||||| || || || ||||||||| ||| || | ||||| || || || Sbjct 61565 ATTGAACAATGTAGGTGATGCATGTGTAAACCATCCTTCGGACATAAGATTATATGTTTC 61506 Query 63680 AATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTG 63739 || |||| || ||||| || |||||| || || || |||||||| ||||| || || Sbjct 61505 GATTGCTGCATCAATATCATCTTTATGAATACCAACGGCAACACGCATCAACATATGTTG 61446 Query 63740 AGGTCTTTCAACGATCTTGTTGTTTA-TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAA 63798 || | |||||| | ||| ||| | |||||||||| || || | ||| ||||| | Sbjct 61445 TGGACGTTCAAC-AGCTTTTTGACCAATTTTCAACAAATACGAACGATACAATGTTTTGA 61387 Query 63799 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838 |||||||||| ||| || | | ||||| || ||||| || Sbjct 61386 AACCAAAATAATTGAATCGATAATCTCGATCATAAATGAT 61347 >seq1705 Length=717327 Score = 439 bits (486), Expect = 3e-118 Identities = 678/953 (71%), Gaps = 20/953 (2%) Strand=Plus/Plus Query 32958 TTAAAAGTCAACATCTA-AAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 33013 |||||| ||| ||||| || ||| || | |||||| | ||||| || || ||| Sbjct 625389 TTAAAAATCAGCATCTGTAACAAATATC-TGATCTTCAGGCCGTGACATGACACCACTTT 625447 Query 33014 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33073 |||| ||||| | |||||||||||||||||||| | ||| ||||||||||| || | || Sbjct 625448 TTTGATATTCGGCAACACGTTTTTCGAAAAAATTTGATTTACCTTCCAATGAAATTTGTT 625507 Query 33074 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTC-AGAAATC 33132 |||| || ||||| ||||||| |||||| ||||| | | |||||| | ||| Sbjct 625508 CCATAAATTCAAATGGATTGGCCGTTTTATAATGTTTTTCACAATTCAATTCTACCAATA 625567 Query 33133 AATCTATCCGCGACGA-ATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 33191 || | ||| || || | |||| ||||| ||| | || ||||||| || || | Sbjct 625568 AA-CGATCTGC-ACAATATTCAATATAATCGGACATTAATTTTGAATTCATGCCAATCAA 625625 Query 33192 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 | |||||| | || | || | ||||| |||||||| ||||| ||||| | ||||| Sbjct 625626 TGAAACTGGTAATGCATCGGTCAAGAATTCCTGTTCAATCGATACAGCATCGATAATAAT 625685 Query 33252 AGATCTAACGGTTTCTTCACTCGGTGGATGC--AATAA-ATGTTTAAACATCAAACATGC 33308 | || ||| || || | |||| | | || ||| | ||||| || ||||| Sbjct 625686 A--TC-AACAATTCGTTGTGGTGATGGACGATTACGAATATGGTGAAACAATAAGCATGC 625742 Query 33309 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGG 33368 ||||| || || | || || || | ||| | ||| || ||||| || || || || Sbjct 625743 AAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATTCGAAAATGTAAGACCAGG 625802 Query 33369 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCC 33428 ||| |||||||| |||||||||||||| || | || ||||| |||||||| |||||||| Sbjct 625803 CATGAGGCCACGTTTTTTAAGCCAAAAAATTGCGGCAAATGAACCAGAAAAAAAGATTCC 625862 Query 33429 TTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCA----TAACCGGCGCTGTCATGTATCC 33484 ||| || || ||||| ||||| | | || | |||| | | || || ||| Sbjct 625863 TTCAACGGCTGCAAATGCAATCAAACGTTCAGCGAATGTAACTGAATCA-TCCTGGGTCC 625921 Query 33485 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGA 33544 | | |||||| | || || |||| ||||||||| | | ||||||||| || | Sbjct 625922 AACGTATAGCCCATTTAGCTTTTTTTTCTACACAAGGTAAATTACGTATGGCATTGAATA 625981 Query 33545 GATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCG 33604 || | | || |||| ||| ||| ||||| |||| |||||| | ||||||||| | Sbjct 625982 GAAAATCTTGTTCACTACGATCCGATACATATGTATTGATCAATAATGAATACATTTCTG 626041 Query 33605 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTA 33664 |||||| ||||||||||| || ||||| || || ||||| | || || | || |||| Sbjct 626042 AATGAACATTTTCAATGGCAATTTGAAAGCCATAAAAACAACGTGCTTCTGGTATTTGTA 626101 Query 33665 CTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 33724 | || | ||| ||||| |||| ||||||||| || || || || || || ||||||| Sbjct 626102 CATCACGAATAAAACGTTCGGCCAGATTTTCATTGACAATACCATCGCTTGCAGCAAAAA 626161 Query 33725 ACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGA 33784 | |||||||||||| | || |||| |||||| | || | | || |||||||| | Sbjct 626162 ATGCCAATACATGTGTAATGAAATGTTTTTCATTTGCATTCAATTGATTCCAATGGGCAA 626221 Query 33785 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 33844 |||| | || ||| |||||||| |||||||| |||||||| || || |||||||||| Sbjct 626222 TATCACGACTTAGATCCACTTCTTCAACTGTCCAGAATGATGCTTCAGCTTTTTTATACA 626281 Query 33845 TGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 33897 || |||| ||||||| |||||| ||||| || | |||||| | |||||||||| Sbjct 626282 TGATCCAAATGTCATGATATTGAATTGGAAACAAAACAAAACGATTTGGATTT 626334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622933915650960