Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1123 132 5e-26 seq1705 118 1e-21 seq1658 118 1e-21 seq1489 118 1e-21 seq1179 100 3e-16 >seq1123 Length=366939 Score = 132 bits (146), Expect = 5e-26 Identities = 955/1513 (63%), Gaps = 51/1513 (3%) Strand=Plus/Plus Query 147462 ACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAAC 147521 || ||| | || || || ||||| | || | ||| | |||||| ||| | || || || Sbjct 23486 ACCTGAAATTCTCCGGAAAGAACACGTCTTGTGTATATATTACTTGTATATGGTTCAAAA 23545 Query 147522 GACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAAT 147581 || || ||||| || ||||| ||||| |||| || || ||||| ||| | | || Sbjct 23546 GATTCATTGTTCCCAAGAATTTGTGCTGTCGAAGCTGTAGGCATTGGAGCTACAAGCAAA 23605 Query 147582 GAATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTA-AGCTCGTCCCAGTTCCAAAGATC 147640 ||| |||| || || | || ||| | |||| | |||| ||| ||||||||| Sbjct 23606 CTATTTCGTATACCATGTTTTGCAATT-CGAGCTTTCAAATCGTTCCAATTCCAAAGAG- 23663 Query 147641 ATTCGATTGGTTAAT-ATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGCTTC 147699 || |||||| | |||||||| |||||||||| || | | | | || || Sbjct 23664 ATG---TTGGTTGACGATTCCACATGTCAAACTGTAGAATACTTTTAGATACTGGTGATC 23720 Query 147700 CATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGACTTAGTGCAC 147759 | || || | || |||| || | ||| ||| | ||| |||| || ||||| Sbjct 23721 CTTCATACGTTTCATATGGACCATTTCGTTCAGCCAATTCACAACTTGCTTCTAATGCAC 23780 Query 147760 CATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCCTCTTGGCTGTCGTAGG 147819 |||||||||| ||||| |||||| |||| | || ||| |||| || ||||| | Sbjct 23781 CATAATAAATTGTTTCAAAAATCTGAATATTGAGCAATCGAGCTTCTTCACTTTCGTATG 23840 Query 147820 GCATATC-CAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGATGGGTCGG 147878 | ||| | || | ||| | ||| || | ||||||| ||||||||| || ||||| Sbjct 23841 G-ATAACGCATTAGAATGAATGCATCGGCCAAACCTTGAACACCGATACCTATCGGTCGA 23899 Query 147879 TGTCTGAAATTCGATGCTTGAGCGCTAGCCAACGGATAAAAATTCAAGTCGATAATTTTA 147938 || | | |||||| | | || | | |||||| || | | || |||| ||| Sbjct 23900 TGACGAAGATTCGAATATCGTGCTTCCGGTACGGGATAATAAGTAACATCAATAACTTTG 23959 Query 147939 TTGAGATTATTGGTAACCACTCTAGATACATTGTAGAGCGACTT---AAAGTCGAAGCTT 147995 || |||||| || || ||| || ||| | | | | || ||| || || || Sbjct 23960 TTTAGATTACGAGTGACAACTTTA---ACAATCGATTTCAATTTTTTAAAATCATAGATT 24016 Query 147996 TTAAACTGTTTATTGGCAAAATTATTTACGGCAATCGAGGCCAAGTTACACACGGCCGTT 148055 | | | || |||| || || | ||||||||||| || ||||| || || || Sbjct 24017 CGATTTTTATGATCAACAAATTTGTTCAAAGCAATCGAGGCTAAATTACAGACAGCAATT 24076 Query 148056 TC-TCGATTGTCGCTATATTGAACGATTTCGGCACACAGATT-GCTGTTTCGAATCACTC 148113 || || | | | ||||| || || || | ||| ||||| | || || | | Sbjct 24077 TCATCTTTAGATGA-ATATTCCACAATCTCCGTACAAAGATTAGAACATTTGATTG--TA 24133 Query 148114 CCTCGttttt-ttGATTATTTTTATTGTTAACGTGATCTTTAAACATCATGTATGGAGCT 148172 || | |||| |||||| |||| ||| ||||| ||| | | ||| || || | Sbjct 24134 CCAAGATTTTGTTGATTTGATTTACGATTACAATGATCCTTATAAACCATATACGGTGTG 24193 Query 148173 CCGGTCTCGACTTGAGTCTCAATAATTTTTCTATGAAGATCTAAAGC-CGAAATT-TGTT 148230 || || |||| ||| | |||||||| |||||| ||| ||| ||| || | Sbjct 24194 CCAGTTTCGATTTGTGATTCAATAATGGAAAACCAAAGATCACGAGCACGACATTGTGAT 24253 Query 148231 TTTTAAACTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGC 148290 || || ||| || |||| ||| || || | || ||||||| || | | Sbjct 24254 CGATATCGTTT--TTCATTTTCATAATGTTCATATAGCTTTTCAAATTCTTCACCCCAAC 24311 Query 148291 AATCGTTTAAACCGGGACACTCGTCGGGGCACATCAATGACCAT-TTCCCTCCTGTCTTT 148349 |||| ||| || |||||||| | || |||||||||||||| || | || || | Sbjct 24312 AATCAAATAATCCAGGACACTCATTCGGACACATCAATGACCACATTGCATCTTGA-TCC 24370 Query 148350 ACCCTCTTCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGC-CTTCAT 148408 || | ||||| || | |||||| |||| | |||| ||| | ||| || || | | || Sbjct 24371 ACACGTTTCATGAATAAATCAGGAATCCAAAGGGCATAAAATAAATCACGTGCACGTAAT 24430 Query 148409 ATCCTCGGCACCCATATTGCGCTTTA----GATCCaaaaaagtaaaaaCGTCTGCGTGCC 148464 || |||| || |||| |||| ||| | |||| ||| | || | |||| Sbjct 24431 -TCTTCGGATCCGGTATT----TTTACGAAGATTTATAAAATCAAAGATATCCGAATGCC 24485 Query 148465 AAGGCTCGATGTATACGGTCATGGCGCCTTTCCTTTTA---CCTCCTTGATCGACATGGC 148521 | || || | || | || | || || | ||| || |||||||| |||| | Sbjct 24486 ATGGTTCTAGATAGATGGCAAATGCTCCAGGACGTTTGTTGCCACCTTGATCAACATATC 24545 Query 148522 GTAGCATGCTATTAAAAACACGCAATGCAGGTCCCAATCCCGCCGCAGTTCCGTTTGTGG 148581 | | | |||| | ||||| || ||| |||| || | | ||| || || Sbjct 24546 GAGCCGTATTATTGTATACACGTAACATAGGAACCAAGCCATTAGAAAATCCATTCGTAC 24605 Query 148582 ATTCAATTTTACTATTGGTGGCGCGAATTTGAGTGACATTCAGGCCGATGCCGCCTCCGT 148641 |||| | |||| | | || || | ||||| || || || ||||| | Sbjct 24606 CGGCAATATAACTACCAGAAGATCGGATACAATGAACATTAAGACCAATACCGCCAGCTG 24665 Query 148642 GTTTAGATATCATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTT 148701 ||| || || |||||||||| || || || | ||| || || | |||||| || || Sbjct 24666 ATTTTGAAATAATGGCACAATTTTTAAGGGTATCATATATACCTTCAATACTATCATCAC 24725 Query 148702 GAATGTTAAGCAGGTAGCACGATGACATTTGAGGCATTTTCATGCCAGACGAAAATAGAG 148761 || ||||||| | || ||||| | ||| ||| ||| |||| | ||| | | Sbjct 24726 TCATAGTAAGCAGAAAACATGATGATAATTGTGGCCGTTTTGTGCCGGCATTAAACAATG 24785 Query 148762 TTGGACTAGCGTGAGTGAACAGCTTTGCCCGCATCAATCTATAGGATTCGATAGCGCTTT 148821 | || || || || ||| ||| || || || |||| | ||| || ||| | Sbjct 24786 TAGGTGATGCATGTGTAAACCAATTTTCCGAGATTAAATTATACGTTTCAATGGCGGCAT 24845 Query 148822 CGATGTCATCACCATGAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTCGA 148881 |||| |||||||||||||| | ||| |||||||| ||| ||||| || | | Sbjct 24846 CGATATCATCACCATGAATACCAATAGCACAACGCATCAACATATGTTGGGGTCGTT--- 24902 Query 148882 CGACAATATTATCG---ACTCTCATCAAATATTTTCCTTCGAT-TAAAGTCATCAGACCA 148937 |||||| || ||| | | | | |||||| ||||||| ||| || | | |||| Sbjct 24903 CGACAACCTTGTCGCAAATTTTGAGCAAATA----ACTTCGATATAATGTTTTGAAACCA 24958 Query 148938 AAGTAAGTGTAAT 148950 || ||| |||||| Sbjct 24959 AAATAATTGTAAT 24971 >seq1705 Length=717327 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || |||||||| || ||||| ||| | |||||| | ||| | ||| || Sbjct 502657 ATGCAAATATTCGTAAAAACTTTGACTGGTAAAACAATCACCTTGGAAGTGGAACCATCG 502716 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || ||| || ||| ||||||||||| || || || ||||| Sbjct 502717 GATACCATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAAGGTATCCCACCAGATCAG 502776 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | |||| | ||| |||||| | ||||||| | | | ||| || ||| Sbjct 502777 CAACGGTTGATTTTTGCCGGTAAACAATTGGAAGATGGCCGTACTTTGTCCGATTACAAC 502836 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 ||||| |||||||| || ||||||| || ||| ||||| | || ||||| Sbjct 502837 ATTCAGAAAGAATCCACCCTCCATCTTGTACTGCGACTTCGTGGTGGAAA 502886 Score = 109 bits (120), Expect = 5e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| ||||| |||||||| || | || || | ||| | ||| || Sbjct 501973 ATGCAAATTTTTGTCAAAACCTTAACTGGTAAGACTATTACATTGGAAGTCGAACCATCG 502032 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || ||| ||| || || |||||||| || || || ||||| Sbjct 502033 GACACGATTGAAAATGTGAAAGCAAAAATCCAAGATAAAGAAGGTATCCCACCAGATCAG 502092 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 ||| || | |||| | || |||||||| ||||||| | | | | | | || ||||| Sbjct 502093 CAACGATTGATTTTTGCTGGTAAACAACTTGAAGATGGCCGTA-CATTATCTGATTATAA 502151 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 ||| ||||||||||||||| ||||||| ||| || Sbjct 502152 CATCCAAAAAGAATCTACTCTCCATCTTGTCTTG 502185 Score = 102 bits (112), Expect = 8e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 119646 TACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATA 119705 || ||| | ||||||||||| |||||||| | || || || | || || | | |||| Sbjct 625453 TATTCGGCAACACGTTTTTCGAAAAAATTTGATTTACCTTCCAATGAAATTTGTTCCATA 625512 Query 119706 AACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGA 119765 || || || ||||| || || || |||| || || | ||| || | ||| | ||| Sbjct 625513 AATTCAAATGGATTGGCCGTTTTATAATGTTTTTCACAATTCAATTCTACCAATAAACGA 625572 Query 119766 TCTGCCACAA-ACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAGCGAC 119824 |||| ||||| | || || || ||| |||| ||| ||||||||||| | || | || Sbjct 625573 TCTG-CACAATATTCAATATAATCGGACATTAATTTTGAATTCATGCCAATCAATGAAAC 625631 Query 119825 CGGTAAAGCATTGGTAAAGAAATCCTTTTCAAT 119857 ||||| |||| ||| ||||| |||| |||||| Sbjct 625632 TGGTAATGCATCGGTCAAGAATTCCTGTTCAAT 625664 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| |||||||| || || || | || || | ||| | || || | Sbjct 502201 ATGCAAATTTTTGTCAAAACATTGACCGGCAAGACCATTACATTGGAAGTCGAGCCATCC 502260 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || ||| || ||| ||||||||||| || || || ||||| Sbjct 502261 GATACCATTGAAAATGTGAAAGCTAAAATTCAGGACAAAGAAGGTATCCCACCAGATCAG 502320 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | || | | ||| ||||| | ||||||| ||| | || || ||||| Sbjct 502321 CAACGGTTGATCTTTGCCGGTAAACAGTTGGAAGATGGCCGAACATTGAGTGATTATAAT 502380 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTC 26978 || ||||||||||| || ||||||| ||| Sbjct 502381 ATCCAAAAAGAATCCACCCTCCATCTTGTC 502410 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || || ||||| ||| | || || | ||| | || || Sbjct 502429 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAAACAATTACATTGGAAGTTGAGCCATCA 502488 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || ||||| | || ||| || ||| || |||||||| || || || ||||| Sbjct 502489 GATACAATCGAAAATGTGAAAGCCAAAATTCAAGATAAAGAAGGAATCCCACCAGATCAG 502548 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | |||| | ||| ||||| | ||||||| ||| | | || || || ||| Sbjct 502549 CAGCGATTGATTTTTGCCGGTAAACAGTTGGAAGATGGCCGAACCTTGAGTGATTACAAC 502608 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977 || ||||||||||| ||| ||||||| || Sbjct 502609 ATCCAAAAAGAATCCACTCTCCATCTTGT 502637 >seq1658 Length=21299 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || |||||||| || ||||| ||| | |||||| | ||| | ||| || Sbjct 18091 ATGCAAATATTCGTAAAAACTTTGACTGGTAAAACAATCACCTTGGAAGTGGAACCATCG 18150 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || ||| || ||| ||||||||||| || || || ||||| Sbjct 18151 GATACCATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAAGGTATCCCACCAGATCAG 18210 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | |||| | ||| |||||| | ||||||| | | | ||| || ||| Sbjct 18211 CAACGGTTGATTTTTGCCGGTAAACAATTGGAAGATGGCCGTACTTTGTCCGATTACAAC 18270 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 ||||| |||||||| || ||||||| || ||| ||||| | || ||||| Sbjct 18271 ATTCAGAAAGAATCCACCCTCCATCTTGTACTGCGACTTCGTGGTGGAAA 18320 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| |||||||| || || ||| | || || | ||| | || || Sbjct 17634 ATGCAAATTTTTGTCAAAACATTGACCGGCAAAACCATTACTTTGGAAGTCGAGCCATCA 17693 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || ||| || || ||||||||||| || || || |||||| Sbjct 17694 GATACCATTGAAAACGTGAAAGCTAAAATCCAGGACAAAGAAGGAATTCCACCAGATCAA 17753 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | |||| | ||| |||||| | ||||||| |||| | || || ||||| Sbjct 17754 CAACGTTTGATTTTTGCCGGTAAACAATTGGAAGATGGCAGAACATTGAGTGATTATAAT 17813 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||||||||||||| ||||||| || || | ||| | || || Sbjct 17814 ATCCAAAAAGAATCTACTCTCCATCTTGTGTTGCGTCTTCGTGGTGG 17860 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 26772 CAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGAC 26831 ||| | ||||| ||||| |||||||| || | || || | ||| | ||| || ||| Sbjct 17409 CAAATCTTTGTCAAAACCTTAACTGGTAAGACTATTACACTGGAAGTCGAACCATCGGAC 17468 Query 26832 ACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAA 26891 || || || | || ||| ||| || || ||||| || || || || ||||| ||| Sbjct 17469 ACGATTGAAAATGTGAAAGCAAAAATCCAAGATAAAGAGGGTATTCCACCAGATCAGCAA 17528 Query 26892 AGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAACAT 26950 || | |||| | || |||||||| ||||||| | | | | | | ||||||||||| Sbjct 17529 CGATTGATTTTTGCTGGTAAACAACTTGAAGATGGCCGTA-CATTATCTGACTATAACAT 17587 Query 26951 TCAAAAAGAATCTACTATCCATCTGGTC 26978 ||||| ||||| ||| ||||||| ||| Sbjct 17588 CCAAAAGGAATCCACTCTCCATCTTGTC 17615 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | ||||| ||||| |||||||| ||| | || || | ||| | ||| || Sbjct 17176 AATGCAAATTTTTGTCAAAACCTTAACTGGTAAAACCATTACATTGGAAGTGGAACCATC 17235 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || || | |||||| || || ||||||||||| || || || ||||| Sbjct 17236 GGACACTATTGAAAATGTCAAAGCTAAAATCCAAGACAAAGAAGGTATCCCACCAGATCA 17295 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| | | || | | ||| || ||| | || |||| | ||| | || || || Sbjct 17296 GCAACGGTTGATCTTTGCCGGAAAGCAATTGGAGGATGGTCGAACTTTGTCTGATTACAA 17355 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGT 26977 ||||||||||||||| || | ||||| || Sbjct 17356 CATTCAAAAAGAATCCACCCTTCATCTTGT 17385 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || || ||||| ||| | || || | ||| | || || Sbjct 17862 ATGCAAATATTCGTCAAGACTTTGACTGGTAAAACAATTACATTGGAAGTTGAGCCATCA 17921 Query 26829 GACACCATCGAGCAAGTCAAA--CAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886 || || ||||| | || ||| | ||| ||| || |||||||| || || || |||| Sbjct 17922 GATACAATCGAAAATGTGAAAAGCCAAA-ATTCAAGATAAAGAAGGAATCCCACCAGATC 17980 Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATA 26946 | || || | |||| | ||| ||||| | ||||||| ||| | | || || || | Sbjct 17981 AGCAGCGATTGATTTTTGCCGGTAAACAGTTGGAAGATGGCCGAACCTTGAGTGATTACA 18040 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||| ||||||||||| ||| ||||||| || || | ||| | || || Sbjct 18041 ACATCCAAAAAGAATCCACTCTCCATCTTGTGTTGCGTCTTCGTGGTGG 18089 >seq1489 Length=23360 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || |||||||| || ||||| ||| | |||||| | ||| | ||| || Sbjct 5332 ATGCAAATATTCGTAAAAACTTTGACTGGTAAAACAATCACCTTGGAAGTGGAACCATCG 5273 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || ||| || ||| ||||||||||| || || || ||||| Sbjct 5272 GATACCATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAAGGTATCCCACCAGATCAG 5213 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | |||| | ||| |||||| | ||||||| | | | ||| || ||| Sbjct 5212 CAACGGTTGATTTTTGCCGGTAAACAATTGGAAGATGGCCGTACTTTGTCCGATTACAAC 5153 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 ||||| |||||||| || ||||||| || ||| ||||| | || ||||| Sbjct 5152 ATTCAGAAAGAATCCACCCTCCATCTTGTACTGCGACTTCGTGGTGGAAA 5103 Score = 109 bits (120), Expect = 5e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| ||||| |||||||| || | || || | ||| | ||| || Sbjct 6016 ATGCAAATTTTTGTCAAAACCTTAACTGGTAAGACTATTACATTGGAAGTCGAACCATCG 5957 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || ||| ||| || || |||||||| || || || ||||| Sbjct 5956 GACACGATTGAAAATGTGAAAGCAAAAATCCAAGATAAAGAAGGTATCCCACCAGATCAG 5897 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 ||| || | |||| | || |||||||| ||||||| | | | | | | || ||||| Sbjct 5896 CAACGATTGATTTTTGCTGGTAAACAACTTGAAGATGGCCGTA-CATTATCTGATTATAA 5838 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 ||| ||||||||||||||| ||||||| ||| || Sbjct 5837 CATCCAAAAAGAATCTACTCTCCATCTTGTCTTG 5804 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| |||||||| || || || | || || | ||| | || || | Sbjct 5788 ATGCAAATTTTTGTCAAAACATTGACCGGCAAGACCATTACATTGGAAGTCGAGCCATCC 5729 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || ||| || ||| ||||||||||| || || || ||||| Sbjct 5728 GATACCATTGAAAATGTGAAAGCTAAAATTCAGGACAAAGAAGGTATCCCACCAGATCAG 5669 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | || | | ||| ||||| | ||||||| ||| | || || ||||| Sbjct 5668 CAACGGTTGATCTTTGCCGGTAAACAGTTGGAAGATGGCCGAACATTGAGTGATTATAAT 5609 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTC 26978 || ||||||||||| || ||||||| ||| Sbjct 5608 ATCCAAAAAGAATCCACCCTCCATCTTGTC 5579 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || || ||||| ||| | || || | ||| | || || Sbjct 5560 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAAACAATTACATTGGAAGTTGAGCCATCA 5501 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || ||||| | || ||| || ||| || |||||||| || || || ||||| Sbjct 5500 GATACAATCGAAAATGTGAAAGCCAAAATTCAAGATAAAGAAGGAATCCCACCAGATCAG 5441 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | |||| | ||| ||||| | ||||||| ||| | | || || || ||| Sbjct 5440 CAGCGATTGATTTTTGCCGGTAAACAGTTGGAAGATGGCCGAACCTTGAGTGATTACAAC 5381 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977 || ||||||||||| ||| ||||||| || Sbjct 5380 ATCCAAAAAGAATCCACTCTCCATCTTGT 5352 >seq1179 Length=350002 Score = 100 bits (110), Expect = 3e-16 Identities = 513/803 (64%), Gaps = 19/803 (2%) Strand=Plus/Minus Query 147755 TGCACCATAATAAATAGTTTCTGAAATCTTTT--TATTTAAATCTCTAGCCTCTTGGCTG 147812 ||||||||||||||| ||||| |||| ||| |||| | | | |||| || | || Sbjct 62644 TGCACCATAATAAATTGTTTC--AAATATTTGAATATTCATTTGTTTAGCTTCGAGACTT 62587 Query 147813 TCGTAGGGCATATC-CAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGAT 147871 || || || ||| | || | | ||| | ||| || | ||||| | ||| || || || Sbjct 62586 TCATATGG-ATAACGCATTAAGTTGAATGCATCGGCTAAACCTTGTACACCAATTCCAAT 62528 Query 147872 GGGTCGGTGTCTGAAATTCGATGCTTGAGCGCTAGCCAACGGATAAAAATTCAAGTCGAT 147931 ||||| || | | |||||| || || | || ||||||||||| ||||| Sbjct 62527 CGGTCGATGACGTAGATTCGAACGTTTCGCTTCCGGTAATGGATAAAAATTACTATCGAT 62468 Query 147932 AATTTTATTGAGATTATTGGTAACCACTCTAGATACATTGTAGAGCGACTTAAAGTCGAA 147991 |||||| || | ||| || || | ||| || | | | ||| | | | || || Sbjct 62467 AATTTTGTTCAAATTTTTTGTCATTACTTTAACAATTTCTTTGAGTTTATCATAATCAAA 62408 Query 147992 GCTTTTAAACTGTTTATTGGCAAAATTATTTACGGCAATCGAGGCCAAGTTACACACGGC 148051 | || || | || | ||||| | | ||| || ||||| ||||| ||||| Sbjct 62407 TGTAAAAAGCTTTGGATCGACAAAACGTGGCAATGAAATTGAAGCCAAATTACAAACGGC 62348 Query 148052 CGTTTC-TCGATTGTCGCTATATTGAACGATTTCGGCACACAGATT-GCTGTTTCGAATC 148109 |||| || || | ||||| ||| ||||| | ||| ||||| | || || | Sbjct 62347 AATTTCATCAGCTGATGA-ATATTCAACAATTTCCGTACAAAGATTTGAACATTTGA-TG 62290 Query 148110 ACTCCCTCGtttttttGATTATTTTTATTGTTAACGTGATCTTTAAACATCATGTATGGA 148169 |||| |||| |||||| |||| ||| ||||||||| | | |||||||||| Sbjct 62289 GTTCCCAAATTTTGTTGATTTGATTTACGATTACAATGATCTTTATATACCATGTATGGA 62230 Query 148170 GCTCCGGTCTCGACTTGAGTCTCAATAATTTTT--CTATGAAGATCTAAAGCCGAAATTT 148227 | || || || | ||| | || | ||| | || || || || | || Sbjct 62229 GTACCAGTTTCAATTTGTGCATCCAAAATGGCAAACCATAAA--TCATGTGCTTTCACTT 62172 Query 148228 GTTTTTTAAACTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCAT 148287 || | | ||||| ||| || | ||| || || | |||||||||| || Sbjct 62171 GTGACCGATAACGACCTTCACGCTCATATTGTTCATATAGCTTTTCGAATTCTTCACCCC 62112 Query 148288 AGCAATCGTTTAAACCGGGACACTCGTCGGGGCACATCAATGACCATTTCCCTCCTGTCT 148347 | || || | | |||||||| || | || |||||||||||||| | || | | | Sbjct 62111 AACATTCATGAAGTCCGGGACATTCATTTGGACACATCAATGACCACATACCATCCATTT 62052 Query 148348 TTACCCTCTTCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCA 148407 || | |||||||||| ||| ||| |||||| ||| | | || || || || | Sbjct 62051 CAACACGTTTCATAAACAAATCCGGTATCCACAATGCATAGAATAGGTCACGTGCACGTA 61992 Query 148408 TATCCTCGGCACCCATATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAG 148467 || |||| ||| |||| |||||||||||||| | ||||| ||||| ||||| | Sbjct 61991 GCTCTTCGGAACCAGTATTCTTTTTTAGATCCAAAAAGGCAAAAATATCTGCATGCCATG 61932 Query 148468 GCTCGATGTATACGGTCATGGCGCCTTTCCTTTT---ACCTCCTTGATCGACATGGCGTA 148524 |||| | || | | | || ||| | ||| ||| |||||||| |||| ||| Sbjct 61931 GCTCCAAATAGATAGCAAATGCACCTGGACGTTTTCCACCACCTTGATCCACATAACGT- 61873 Query 148525 GCA-TGCTATTAAAAACACGCAA 148546 ||| || |||| || ||||| || Sbjct 61872 GCAGTGTTATTGAATACACGTAA 61850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478652192524320