Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1658 125 6e-24 seq1705 109 5e-19 seq1489 109 5e-19 seq1123 109 5e-19 seq1179 84.2 2e-11 >seq1658 Length=21299 Score = 125 bits (138), Expect = 6e-24 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| |||||||| || || ||| | ||||| | ||||||||| ||| | Sbjct 17634 ATGCAAATTTTTGTCAAAACATTGACCGGCAAAACCATTACTTTGGAAGTCGAG-CCATC 17692 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || ||||| || | || ||| || || ||||||||||| || || || ||||| Sbjct 17693 AGATACCATTGAAAACGTGAAAGCTAAAATCCAGGACAAAGAAGGAATTCCACCAGATCA 17752 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | |||||| | ||| || ||| | ||||||| ||||| | || |||||||| Sbjct 17753 ACAACGTTTGATTTTTGCCGGTAAACAATTGGAAGATGGCAGAACATTGAGTGATTATAA 17812 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 || |||||||||||||| | ||| | ||||| Sbjct 17813 TATCCAAAAAGAATCTACTCTCCATCTTGTGTT 17845 Score = 104 bits (114), Expect = 2e-17 Identities = 155/215 (72%), Gaps = 5/215 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || ||||| ||| | ||||| | ||||| ||| ||| | Sbjct 17862 ATGCAAATATTCGTCAAGACTTTGACTGGTAAAACAATTACATTGGAAGTTGAG-CCATC 17920 Query 24051 -GACACCATCGAGCAAGTCAAA--CAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 || || ||||| | || ||| | ||| ||| || |||||||| || || || ||| Sbjct 17921 AGATACAATCGAAAATGTGAAAAGCCAAA-ATTCAAGATAAAGAAGGAATCCCACCAGAT 17979 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||| || |||||| | ||| || || | ||||||| | ||| | | || ||||| Sbjct 17980 CAGCAGCGATTGATTTTTGCCGGTAAACAGTTGGAAGATGGCCGAACCTTGAGTGATTAC 18039 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 ||||| ||||||||||| || | ||| | ||||| Sbjct 18040 AACATCCAAAAAGAATCCACTCTCCATCTTGTGTT 18074 Score = 102 bits (112), Expect = 7e-17 Identities = 153/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| ||||| |||||||| ||| | ||||| | ||||| || ||| Sbjct 17176 AATGCAAATTTTTGTCAAAACCTTAACTGGTAAAACCATTACATTGGAAGTGGAA-CCAT 17234 Query 24050 CG-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108 || |||| || || | |||||| || || ||||||||||| || || || |||| Sbjct 17235 CGGACACTATTGAAAATGTCAAAGCTAAAATCCAAGACAAAGAAGGTATCCCACCAGATC 17294 Query 24109 AACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATA 24168 | || | |||| | | ||| |||||| | || |||| ||| | ||||| | Sbjct 17295 AGCAACGGTTGATCTTTGCCGGAAAGCAATTGGAGGATGGTCGAACTTTGTCTGATTACA 17354 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 |||||||||||||||| || ||||| | || ||| Sbjct 17355 ACATTCAAAAAGAATCCACCCTTCATCTTGTATTA 17389 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || |||||||| || ||||| ||| | || ||| | ||||| || ||| | Sbjct 18091 ATGCAAATATTCGTAAAAACTTTGACTGGTAAAACAATCACCTTGGAAGTGGAA-CCATC 18149 Query 24051 G-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 | | ||||| || | || ||| || ||| ||||||||||| || || || ||||| Sbjct 18150 GGATACCATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAAGGTATCCCACCAGATCA 18209 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | |||||| | ||| || ||| | ||||||| | | | | |||||| || Sbjct 18210 GCAACGGTTGATTTTTGCCGGTAAACAATTGGAAGATGGCCGTACTTTGTCCGATTACAA 18269 Query 24170 CATTCAAAAAGAATCTAC 24187 |||||| |||||||| || Sbjct 18270 CATTCAGAAAGAATCCAC 18287 >seq1705 Length=717327 Score = 109 bits (120), Expect = 5e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || ||||| ||| | ||||| | ||||| ||| ||| | Sbjct 502429 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAAACAATTACATTGGAAGTTGAG-CCATC 502487 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || ||||| | || ||| || ||| || |||||||| || || || ||||| Sbjct 502488 AGATACAATCGAAAATGTGAAAGCCAAAATTCAAGATAAAGAAGGAATCCCACCAGATCA 502547 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| || |||||| | ||| || || | ||||||| | ||| | | || ||||| || Sbjct 502548 GCAGCGATTGATTTTTGCCGGTAAACAGTTGGAAGATGGCCGAACCTTGAGTGATTACAA 502607 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 ||| ||||||||||| || | ||| | |||||| Sbjct 502608 CATCCAAAAAGAATCCACTCTCCATCTTGTGTTA 502641 Score = 105 bits (116), Expect = 6e-18 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| |||||||| || | ||||| | |||||||| ||| | Sbjct 501973 ATGCAAATTTTTGTCAAAACCTTAACTGGTAAGACTATTACATTGGAAGTCGAA-CCATC 502031 Query 24051 G-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 | |||| || || | || ||| ||| || || |||||||| || || || ||||| Sbjct 502032 GGACACGATTGAAAATGTGAAAGCAAAAATCCAAGATAAAGAAGGTATCCCACCAGATCA 502091 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATA 24168 || || |||||| | || || ||||| ||||||| | | | | | | | ||||||| Sbjct 502092 GCAACGATTGATTTTTGCTGGTAAACAACTTGAAGATGGCCGTA-CATTATCTGATTATA 502150 Query 24169 ACATTCAAAAAGAATCTAC 24187 |||| |||||||||||||| Sbjct 502151 ACATCCAAAAAGAATCTAC 502169 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| |||||||| || || || | ||||| | ||||||||| | | Sbjct 502201 ATGCAAATTTTTGTCAAAACATTGACCGGCAAGACCATTACATTGGAAGTCGAGCCATCC 502260 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || ||| || ||| ||||||||||| || || || ||||| Sbjct 502261 GATACCATTGAAAATGTGAAAGCTAAAATTCAGGACAAAGAAGGTATCCCACCAGATCAG 502320 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | |||| | | ||| || || | ||||||| | ||| | || |||||||| Sbjct 502321 CAACGGTTGATCTTTGCCGGTAAACAGTTGGAAGATGGCCGAACATTGAGTGATTATAAT 502380 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 || ||||||||||| || | ||| | || ||| Sbjct 502381 ATCCAAAAAGAATCCACCCTCCATCTTGTCTTA 502413 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || |||||||| || ||||| ||| | || ||| | ||||| || ||| | Sbjct 502657 ATGCAAATATTCGTAAAAACTTTGACTGGTAAAACAATCACCTTGGAAGTGGAA-CCATC 502715 Query 24051 G-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 | | ||||| || | || ||| || ||| ||||||||||| || || || ||||| Sbjct 502716 GGATACCATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAAGGTATCCCACCAGATCA 502775 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | |||||| | ||| || ||| | ||||||| | | | | |||||| || Sbjct 502776 GCAACGGTTGATTTTTGCCGGTAAACAATTGGAAGATGGCCGTACTTTGTCCGATTACAA 502835 Query 24170 CATTCAAAAAGAATCTAC 24187 |||||| |||||||| || Sbjct 502836 CATTCAGAAAGAATCCAC 502853 >seq1489 Length=23360 Score = 109 bits (120), Expect = 5e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || ||||| ||| | ||||| | ||||| ||| ||| | Sbjct 5560 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAAACAATTACATTGGAAGTTGAG-CCATC 5502 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || ||||| | || ||| || ||| || |||||||| || || || ||||| Sbjct 5501 AGATACAATCGAAAATGTGAAAGCCAAAATTCAAGATAAAGAAGGAATCCCACCAGATCA 5442 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| || |||||| | ||| || || | ||||||| | ||| | | || ||||| || Sbjct 5441 GCAGCGATTGATTTTTGCCGGTAAACAGTTGGAAGATGGCCGAACCTTGAGTGATTACAA 5382 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 ||| ||||||||||| || | ||| | |||||| Sbjct 5381 CATCCAAAAAGAATCCACTCTCCATCTTGTGTTA 5348 Score = 105 bits (116), Expect = 6e-18 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| |||||||| || | ||||| | |||||||| ||| | Sbjct 6016 ATGCAAATTTTTGTCAAAACCTTAACTGGTAAGACTATTACATTGGAAGTCGAA-CCATC 5958 Query 24051 G-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 | |||| || || | || ||| ||| || || |||||||| || || || ||||| Sbjct 5957 GGACACGATTGAAAATGTGAAAGCAAAAATCCAAGATAAAGAAGGTATCCCACCAGATCA 5898 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATA 24168 || || |||||| | || || ||||| ||||||| | | | | | | | ||||||| Sbjct 5897 GCAACGATTGATTTTTGCTGGTAAACAACTTGAAGATGGCCGTA-CATTATCTGATTATA 5839 Query 24169 ACATTCAAAAAGAATCTAC 24187 |||| |||||||||||||| Sbjct 5838 ACATCCAAAAAGAATCTAC 5820 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| |||||||| || || || | ||||| | ||||||||| | | Sbjct 5788 ATGCAAATTTTTGTCAAAACATTGACCGGCAAGACCATTACATTGGAAGTCGAGCCATCC 5729 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || ||| || ||| ||||||||||| || || || ||||| Sbjct 5728 GATACCATTGAAAATGTGAAAGCTAAAATTCAGGACAAAGAAGGTATCCCACCAGATCAG 5669 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | |||| | | ||| || || | ||||||| | ||| | || |||||||| Sbjct 5668 CAACGGTTGATCTTTGCCGGTAAACAGTTGGAAGATGGCCGAACATTGAGTGATTATAAT 5609 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 || ||||||||||| || | ||| | || ||| Sbjct 5608 ATCCAAAAAGAATCCACCCTCCATCTTGTCTTA 5576 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || |||||||| || ||||| ||| | || ||| | ||||| || ||| | Sbjct 5332 ATGCAAATATTCGTAAAAACTTTGACTGGTAAAACAATCACCTTGGAAGTGGAA-CCATC 5274 Query 24051 G-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 | | ||||| || | || ||| || ||| ||||||||||| || || || ||||| Sbjct 5273 GGATACCATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAAGGTATCCCACCAGATCA 5214 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | |||||| | ||| || ||| | ||||||| | | | | |||||| || Sbjct 5213 GCAACGGTTGATTTTTGCCGGTAAACAATTGGAAGATGGCCGTACTTTGTCCGATTACAA 5154 Query 24170 CATTCAAAAAGAATCTAC 24187 |||||| |||||||| || Sbjct 5153 CATTCAGAAAGAATCCAC 5136 >seq1123 Length=366939 Score = 109 bits (120), Expect = 5e-19 Identities = 912/1444 (63%), Gaps = 52/1444 (4%) Strand=Plus/Plus Query 132215 TGATATTCACCCGATAAGACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGAT 132274 ||| |||| || || | || | || | ||| | |||||| ||| | || || || ||| Sbjct 23489 TGAAATTCTCCGGAAAGAACACGTCTTGTGTATATATTACTTGTATATGGTTCAAAAGAT 23548 Query 132275 TCGTTGTTTCCCAATATTTGAGCTGTCGTTGCCGTCGGCAT-GTAGG--CAATCAATAAT 132331 || ||||| || | ||||| ||||||| || || ||||| | || ||| ||| | | Sbjct 23549 TCATTGTTCCCAAGAATTTGTGCTGTCGAAGCTGTAGGCATTGGAGCTACAAGCAA-ACT 23607 Query 132332 GAATTGCGCAGCCCGTGTATGGCCATTTGCCGTTTAAGCTCGTCCCAGTTCCACAGATCA 132391 ||| || | || ||| | || ||| | ||| | |||| ||| ||||| ||| Sbjct 23608 --ATTTCGTATACCATGTTTTGCAATTCGAGCTTTCAAATCGTTCCAATTCCAAAGAGAT 23665 Query 132392 TTCGATTGAGAGATATTCCACAAATCAAACTGTAAATGACCGCTACTTGCAGGAGATCCG 132451 | | |||| |||||||| |||||||||| | || || | | || ||||| Sbjct 23666 GTTGGTTGACG---ATTCCACATGTCAAACTGTAGAATACTTTTAGATACTGGTGATCCT 23722 Query 132452 TTATAAGAATCGTATGCTCCGTGTAATTTGGCAAGTTCTATGCTCTGACTC-AGGGCACC 132510 | ||| | || |||| || | | || || | ||| || || || | ||||| Sbjct 23723 TCATACGTTTCATATGGACCATTTCGTTCAGCCAATTCACAACT-TGCTTCTAATGCACC 23781 Query 132511 ATAATAAATAGTCTCTGAGATTTTTCTATT---CAATTCCCTTGCTTGTTGACTGTCGTA 132567 ||||||||| || || | || | |||| |||| | |||| || ||| ||||| Sbjct 23782 ATAATAAATTGTTTCAAAAATCTGAATATTGAGCAAT---CGAGCTTCTTCACTTTCGTA 23838 Query 132568 GGGCAAAT---TTAAAATAGCGAACGCATCGGCAAGTCCCTGAATGCCGATACCGATGGG 132624 || || ||| ||| ||| |||||||| | || |||| |||||||| || || Sbjct 23839 TGGATAACGCATTAGAAT---GAATGCATCGGCCAAACCTTGAACACCGATACCTATCGG 23895 Query 132625 TCTATGTTTAAAATTCGATACTTGTGCGCTAGTCAGCGGATAAAAGTTTTTGTCTATTAT 132684 || ||| || |||||| | |||| | | |||||| | | || || | Sbjct 23896 TCGATGACGAAGATTCGAATATCGTGCTTCCGGTACGGGATAATAAGTAACATCAATAAC 23955 Query 132685 TTTATTGAGATTGTTAGTGACAACTCTAGCCACTTTATAT-AGCGATTCAAAGTCAAAGT 132743 ||| || ||||| |||||||||| || | | | || | | || ||| ||| || Sbjct 23956 TTTGTTTAGATTACGAGTGACAACTTTAACAA-TCGATTTCAATTTTTTAAAATCATAGA 24014 Query 132744 TTTTAGTCCTTTTGTTGGCAAAACAATTG---ACGGCAATCGAGGCCAAATTGCATACGG 132800 || | | || || | ||| | | ||| | ||||||||||| ||||| || || | Sbjct 24015 TTCGATTT-TTATGAT--CAACAAATTTGTTCAAAGCAATCGAGGCTAAATTACAGACAG 24071 Query 132801 CTGTCTCTTTATTATCGCTATACTGTACGATTTCTGCACACAAATTACTGT-TTCGAATA 132859 | | || | ||| ||| | || || || | ||| | |||| || || | Sbjct 24072 CAATTTCATCTTTAGATGAATATTCCACAATCTCCGTACAAAGATTAGAACATTTGATTG 24131 Query 132860 ACTCCCAAGttttt-ttGATTGTTTTTCTCGTTTACGTT-ATCTTTATGCAACATGTACG 132917 | ||||| |||| |||||| ||| || |||| | ||| |||| | ||| |||| Sbjct 24132 --TACCAAGATTTTGTTGATTTGATTTA-CGATTACAATGATCCTTATAAACCATATACG 24188 Query 132918 GACCTCCGGTTTCGACCTGAATTTCGATAATTTTTCTGTGAAGATCTAACGC-CAAAATT 132976 | || ||||||| || ||| ||||| |||||| || | | ||| Sbjct 24189 GTGTGCCAGTTTCGATTTGTGATTCAATAATGGAAAACCAAAGATCACGAGCACGACATT 24248 Query 132977 -TGTTCTTTAAACTTGCCCTGAGTCTCGTAACTTTCGTATAATCGCTCAAATTCTTCGCC 133035 || || || || | | | || ||| ||| |||| ||||||||||| || Sbjct 24249 GTGATCGATATCGTTTTTC--ATTTTCATAATGTTCATATAGCTTTTCAAATTCTTCACC 24306 Query 133036 ATAGCAGTCGTTCAAACCGGGACACTCGTCAGGACACATCAATGACCATTTTTC-TCCTG 133094 | || || || || |||||||| | ||||||||||||||||| || | || || Sbjct 24307 CCAACAATCAAATAATCCAGGACACTCATTCGGACACATCAATGACCACATTGCATCTTG 24366 Query 133095 CGCTCACCCTTTTCATGAACAACGAAGGTGTCCACATGGCAAAAAATAAATCGCGAGC-C 133153 | ||| | ||||||||| || ||| |||| | |||| |||||||||| || || | Sbjct 24367 ATC-CACACGTTTCATGAATAAATCAGGAATCCAAAGGGCATAAAATAAATCACGTGCAC 24425 Query 133154 TTCATATCTTCCGCGCCCATATTTCGTTTC-AAG-TCCaaaaaagtaaaaaTGTCTGCAT 133211 | || ||||| | || ||||| || | ||| | | |||| ||| || || | || Sbjct 24426 GTAAT-TCTTCGGATCCGGTATTT--TTACGAAGATTTATAAAATCAAAGATATCCGAAT 24482 Query 133212 GCCAAGGCTCGATATATACGGCCAAAGCGCCTTTCC---TTTTACCTCCCTGATCCACAT 133268 |||| || || | ||| | ||| || || || | | || || || ||||| |||| Sbjct 24483 GCCATGGTTCTAGATAGATGGCAAATGCTCCAGGACGTTTGTTGCCACCTTGATCAACAT 24542 Query 133269 GTCTAAGCATGCTGTTGAAGACACGCAATGCAGGACCCAATCCTGCGGCAGTACCGTTGG 133328 || | | | | ||| | ||||| || |||| |||| || | | || || | Sbjct 24543 ATCGAGCCGTATTATTGTATACACGTAACATAGGAACCAAGCCATTAGAAAATCCATTCG 24602 Query 133329 TGGATTTGATTTTACTGTTAGCGGCACGAATTTGAGAAACGTTAAGGCCTATACCGCCTC 133388 | || | ||| || | || || | ||| ||||| || |||||||| Sbjct 24603 TACCGGCAATATAACTACCAGAAGATCGGATACAATGAACATTAAGACCAATACCGCCAG 24662 Query 133389 CGTGTTTAGATATCATGGCACAATCGTTGAGAGTTTTATAGATGCCATTGATGCTGTCTT 133448 | ||| || || |||||||||| || || || | ||| || || | || || || | Sbjct 24663 CTGATTTTGAAATAATGGCACAATTTTTAAGGGTATCATATATACCTTCAATACTATCAT 24722 Query 133449 CCTGGATGTTGAGCAAATAACACGACGACATCTGAGGCATTTTCATGCCAGAAGAAAACA 133508 | || | |||| | |||| || || | || ||| ||| |||| | | ||||| Sbjct 24723 CACTCATAGTAAGCAGAAAACATGATGATAATTGTGGCCGTTTTGTGCCGGCATTAAACA 24782 Query 133509 AAGTGGGACTAGCGTGAGTAAACAGCTTTGATCGCATCAATCTGTAGGACTCAATTGCGC 133568 | || || || || |||||| ||| || || | || | ||||| ||| Sbjct 24783 ATGTAGGTGATGCATGTGTAAACCAATTTTCCGAGATTAAATTATACGTTTCAATGGCGG 24842 Query 133569 TTTCAATGTCTTCACCATGAATTTGTAGCGCTACACGCATCAGCATATGTTGAGGTCGCT 133628 || || || ||||||||||| | || |||||||| ||||||||| ||||| | Sbjct 24843 CATCGATATCATCACCATGAATACCAATAGCACAACGCATCAACATATGTTGGGGTCGTT 24902 Query 133629 CCAC 133632 | || Sbjct 24903 CGAC 24906 >seq1179 Length=350002 Score = 84.2 bits (92), Expect = 2e-11 Identities = 171/251 (68%), Gaps = 5/251 (2%) Strand=Plus/Minus Query 133022 TCAAATTCTTCGCCATAGCAGTCGTTCAAACCGGGACACTCGTCAGGACACATCAATGAC 133081 || |||||||| || | || || | | |||||||| || | ||||||||||||||| Sbjct 62127 TCGAATTCTTCACCCCAACATTCATGAAGTCCGGGACATTCATTTGGACACATCAATGAC 62068 Query 133082 CATTTTTC-TCCTGCGCTCACCCTTTTCATGAACAACGAAGGTGTCCACATGGCAAAAAA 133140 || | | ||| | || | |||||| ||||| ||| |||||| ||| | || Sbjct 62067 CACATACCATCCATTTCA-ACACGTTTCATAAACAAATCCGGTATCCACAATGCATAGAA 62009 Query 133141 TAAATCGCGAGCCTTCATATCTTCCGCGCCCATATTTCGTTTCAAGTCCaaaaaagtaaa 133200 || || || || | ||||| | || |||| ||| | |||||||| | ||| Sbjct 62008 TAGGTCACGTGCACGTAGCTCTTCGGAACCAGTATTCTTTTTTAGATCCAAAAAGGCAAA 61949 Query 133201 aaTGTCTGCATGCCAAGGCTCGATATATACGGCCAAAGCGCCTTTCCTTTT---ACCTCC 133257 ||| ||||||||||| ||||| | ||| | || || || ||| | ||| ||| || Sbjct 61948 AATATCTGCATGCCATGGCTCCAAATAGATAGCAAATGCACCTGGACGTTTTCCACCACC 61889 Query 133258 CTGATCCACAT 133268 |||||||||| Sbjct 61888 TTGATCCACAT 61878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429927060824430