Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1705 161 9e-35 seq1658 161 9e-35 seq1489 161 9e-35 >seq1705 Length=717327 Score = 161 bits (178), Expect = 9e-35 Identities = 179/236 (76%), Gaps = 6/236 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||||||||| ||||| |||||||| |||||| | ||||| | |||||||| | || Sbjct 502657 ATGCAAATATTCGTAAAAACTTTGACTGGTAAAACAATCACCTTGGAAGTGGAACCATCG 502716 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || | || |||| |||| ||| ||||||||||| || ||||| || Sbjct 502717 GATACCATTGAA--AATGTAAAAGCTAAAATTCAA-GACAAAGAAGGTATCCCACCAGAT 502773 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || ||| | ||||||||||| |||||||| ||||||| || ||| || ||||||| Sbjct 502774 CAGCAACGGTTGATTTTTGCCGGTAAACAATTGGAAGATGGCCGTACTTTGTCCGATTAC 502833 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 || ||||| ||||||||||| || ||| | || || | || | || ||||| || Sbjct 502834 AACATTCAGAAAGAATCCACCCTCCATCTTGTACTGCGACTTCGTGGTGGAAACTA 502889 Score = 149 bits (164), Expect = 5e-31 Identities = 163/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| |||||| | || ||| | ||||| ||| | || Sbjct 502429 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAAACAATTACATTGGAAGTTGAGCCATCA 502488 Query 25059 GACACTATCGAGTCACTG-AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| || |||| |||| ||| || |||||||| || ||||| || || Sbjct 502489 GATACAATCGAAAATGTGAAAGCCAAAATTCA-AGATAAAGAAGGAATCCCACCAGATCA 502547 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | ||||||||||| ||||| || ||||||| || || || | |||||||| Sbjct 502548 GCAGCGATTGATTTTTGCCGGTAAACAGTTGGAAGATGGCCGAACCTTGAGTGATTACAA 502607 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 || |||||||||||||| || ||| | ||| || Sbjct 502608 CATCCAAAAAGAATCCACTCTCCATCTTGTGTTA 502641 Score = 141 bits (156), Expect = 8e-29 Identities = 158/209 (76%), Gaps = 8/209 (4%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || || || || ||||| |||||| |||| ||| | |||||||| | || Sbjct 501744 AATGCAAATTTTCGTGAAAACATTGACTGGTAAAACCATTACATTGGAAGTGGAACCATC 501803 Query 25058 TGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 ||||||||| || |||| |||| |||||| || |||||||| || ||||| | Sbjct 501804 TGACACTATTGAAAATGTCA---AAGC-TAAAATCCAAGATAAAGAAGGTATCCCACCAG 501859 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173 |||| || || | || ||||| || || ||||| || |||| ||| ||| || ||||| Sbjct 501860 ACCAGCAACGATTGATCTTTGCTGGAAAGCAATTGGAGGATGGTCGAACTTTGTCCGATT 501919 Query 25174 ACAATATTCAAAAAGAATCCACGCTACAT 25202 |||| || ||||| |||||||| || ||| Sbjct 501920 ACAACATCCAAAAGGAATCCACCCTTCAT 501948 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || |||||||| || |||| ||| | ||||| ||| | || Sbjct 502201 ATGCAAATTTTTGTCAAAACATTGACCGGCAAGACCATTACATTGGAAGTCGAGCCATCC 502260 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || |||| || |||| ||| ||||||||||| || ||||| || || Sbjct 502261 GATACCATTGAAAATGTGAAAGCTAAAATTCAG-GACAAAGAAGGTATCCCACCAGATCA 502319 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || ||| | || |||||||| ||||| || ||||||| || || || | ||||| || Sbjct 502320 GCAACGGTTGATCTTTGCCGGTAAACAGTTGGAAGATGGCCGAACATTGAGTGATTATAA 502379 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| |||||||||||||| || ||| | || || | ||| | || || Sbjct 502380 TATCCAAAAAGAATCCACCCTCCATCTTGTCTTACGTCTACGTGGTGG 502427 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || || || ||||| | || ||| | ||||| || | || Sbjct 501973 ATGCAAATTTTTGTCAAAACCTTAACTGGTAAGACTATTACATTGGAAGTCGAACCATCG 502032 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || |||| ||||||| || |||||||| || ||||| || || Sbjct 502033 GACACGATTGAAAATGTGAAAGCAAAAATCCAAGATAAAGAAGGTATCCCACCAGATCAG 502092 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | |||||||| || |||||| | ||||||| || || | ||||| || Sbjct 502093 CAACGATTGATTTTTGCTGGTAAACAACTTGAAGATGGCCGTACATTATCTGATTATAAC 502152 Query 25179 ATTCAAAAAGAATCCACGCTACAT 25202 || ||||||||||| || || ||| Sbjct 502153 ATCCAAAAAGAATCTACTCTCCAT 502176 Score = 96.9 bits (106), Expect = 3e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 ||| |||||||| || || || || | || ||||| ||||||||||||||||||| ||| Sbjct 501618 AGGTATTCCACCAGATCAGCAACGTTTGATCTTTGCTGGCAAACAATTAGAAGATGGTCG 501677 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||| || |||||| ||||||||||| ||||| || | ||||| || Sbjct 501678 AACTTTGTCCGATTATAATATTCAAAAGGAATCTACATTGCATTTGGT 501725 >seq1658 Length=21299 Score = 161 bits (178), Expect = 9e-35 Identities = 179/236 (76%), Gaps = 6/236 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||||||||| ||||| |||||||| |||||| | ||||| | |||||||| | || Sbjct 18091 ATGCAAATATTCGTAAAAACTTTGACTGGTAAAACAATCACCTTGGAAGTGGAACCATCG 18150 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || | || |||| |||| ||| ||||||||||| || ||||| || Sbjct 18151 GATACCATTGAA--AATGTAAAAGCTAAAATTCAA-GACAAAGAAGGTATCCCACCAGAT 18207 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || ||| | ||||||||||| |||||||| ||||||| || ||| || ||||||| Sbjct 18208 CAGCAACGGTTGATTTTTGCCGGTAAACAATTGGAAGATGGCCGTACTTTGTCCGATTAC 18267 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 || ||||| ||||||||||| || ||| | || || | || | || ||||| || Sbjct 18268 AACATTCAGAAAGAATCCACCCTCCATCTTGTACTGCGACTTCGTGGTGGAAACTA 18323 Score = 152 bits (168), Expect = 4e-32 Identities = 169/223 (76%), Gaps = 8/223 (4%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| || || || || |||||| |||| ||| | |||||||| | || Sbjct 17176 AATGCAAATTTTTGTCAAAACCTTAACTGGTAAAACCATTACATTGGAAGTGGAACCATC 17235 Query 25058 TGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 |||||||| || |||| |||| |||| || ||||||||||| || ||||| | Sbjct 17236 GGACACTATTGAAAATGTCA---AAGCTAAAATCCAA-GACAAAGAAGGTATCCCACCAG 17291 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173 | || || ||| | || |||||||| || ||||| || |||| ||| ||| || |||| Sbjct 17292 ATCAGCAACGGTTGATCTTTGCCGGAAAGCAATTGGAGGATGGTCGAACTTTGTCTGATT 17351 Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 |||| ||||||||||||||||| || ||| | || || |||| Sbjct 17352 ACAACATTCAAAAAGAATCCACCCTTCATCTTGTATTACGGCT 17394 Score = 150 bits (166), Expect = 2e-31 Identities = 162/212 (76%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||||||||| || ||||||||||| |||||| | || ||| | ||||| ||| | || Sbjct 17862 ATGCAAATATTCGTCAAGACTTTGACTGGTAAAACAATTACATTGGAAGTTGAGCCATCA 17921 Query 25059 GACACTATCGAGTCACTGAA--GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || || ||||| |||| || |||| ||| || |||||||| || ||||| || | Sbjct 17922 GATACAATCGAAAATGTGAAAAGCCAAAATTCAA-GATAAAGAAGGAATCCCACCAGATC 17980 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | ||||||||||| ||||| || ||||||| || || || | ||||||| Sbjct 17981 AGCAGCGATTGATTTTTGCCGGTAAACAGTTGGAAGATGGCCGAACCTTGAGTGATTACA 18040 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTG 25208 | || |||||||||||||| || ||| | ||| Sbjct 18041 ACATCCAAAAAGAATCCACTCTCCATCTTGTG 18072 Score = 140 bits (154), Expect = 3e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || |||||||| ||| |||| || | ||||| ||| | || Sbjct 17634 ATGCAAATTTTTGTCAAAACATTGACCGGCAAAACCATTACTTTGGAAGTCGAGCCATCA 17693 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || || |||| |||||| ||||||||||| |||||||| || ||| Sbjct 17694 GATACCATTGAAAACGTGAAAGCTAAAATCCAGGACAAAGAAGGAATTCCACCAGATCAA 17753 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | ||||||||||| |||||||| ||||||| | || || | ||||| ||| Sbjct 17754 CAACGTTTGATTTTTGCCGGTAAACAATTGGAAGATGGCAGAACATTGAGTGATTATAAT 17813 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTG 25208 || ||||||||||| || || ||| | ||| Sbjct 17814 ATCCAAAAAGAATCTACTCTCCATCTTGTG 17843 Score = 105 bits (116), Expect = 6e-18 Identities = 88/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 ||| |||||||| || || || || | || ||||| ||||||||||||||||||| ||| Sbjct 17050 AGGTATTCCACCAGATCAGCAACGTTTGATCTTTGCTGGCAAACAATTAGAAGATGGTCG 17109 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||| || |||||||||||||||||||||||| || | ||||| || Sbjct 17110 AACTTTGTCCGATTACAATATTCAAAAAGAATCTACATTGCATTTGGT 17157 >seq1489 Length=23360 Score = 161 bits (178), Expect = 9e-35 Identities = 179/236 (76%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||||||||| ||||| |||||||| |||||| | ||||| | |||||||| | || Sbjct 5332 ATGCAAATATTCGTAAAAACTTTGACTGGTAAAACAATCACCTTGGAAGTGGAACCATCG 5273 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || | || |||| |||| ||| ||||||||||| || ||||| || Sbjct 5272 GATACCATTGAA--AATGTAAAAGCTAAAATTCAA-GACAAAGAAGGTATCCCACCAGAT 5216 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || ||| | ||||||||||| |||||||| ||||||| || ||| || ||||||| Sbjct 5215 CAGCAACGGTTGATTTTTGCCGGTAAACAATTGGAAGATGGCCGTACTTTGTCCGATTAC 5156 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 || ||||| ||||||||||| || ||| | || || | || | || ||||| || Sbjct 5155 AACATTCAGAAAGAATCCACCCTCCATCTTGTACTGCGACTTCGTGGTGGAAACTA 5100 Score = 149 bits (164), Expect = 5e-31 Identities = 163/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| |||||| | || ||| | ||||| ||| | || Sbjct 5560 ATGCAAATTTTCGTCAAGACTTTGACTGGTAAAACAATTACATTGGAAGTTGAGCCATCA 5501 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| |||| || |||| ||| || |||||||| || ||||| || || Sbjct 5500 GATACAATCGAAAATGTGAAAGCCAAAATTCAA-GATAAAGAAGGAATCCCACCAGATCA 5442 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | ||||||||||| ||||| || ||||||| || || || | |||||||| Sbjct 5441 GCAGCGATTGATTTTTGCCGGTAAACAGTTGGAAGATGGCCGAACCTTGAGTGATTACAA 5382 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 || |||||||||||||| || ||| | ||| || Sbjct 5381 CATCCAAAAAGAATCCACTCTCCATCTTGTGTTA 5348 Score = 141 bits (156), Expect = 8e-29 Identities = 158/209 (76%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || || || || ||||| |||||| |||| ||| | |||||||| | || Sbjct 6245 AATGCAAATTTTCGTGAAAACATTGACTGGTAAAACCATTACATTGGAAGTGGAACCATC 6186 Query 25058 TGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 ||||||||| || |||| |||| |||||| || |||||||| || ||||| | Sbjct 6185 TGACACTATTGAAAATGTCA---AAGC-TAAAATCCAAGATAAAGAAGGTATCCCACCAG 6130 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173 |||| || || | || ||||| || || ||||| || |||| ||| ||| || ||||| Sbjct 6129 ACCAGCAACGATTGATCTTTGCTGGAAAGCAATTGGAGGATGGTCGAACTTTGTCCGATT 6070 Query 25174 ACAATATTCAAAAAGAATCCACGCTACAT 25202 |||| || ||||| |||||||| || ||| Sbjct 6069 ACAACATCCAAAAGGAATCCACCCTTCAT 6041 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || |||||||| || |||| ||| | ||||| ||| | || Sbjct 5788 ATGCAAATTTTTGTCAAAACATTGACCGGCAAGACCATTACATTGGAAGTCGAGCCATCC 5729 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || |||| || |||| ||| ||||||||||| || ||||| || || Sbjct 5728 GATACCATTGAAAATGTGAAAGCTAAAATTCAG-GACAAAGAAGGTATCCCACCAGATCA 5670 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || ||| | || |||||||| ||||| || ||||||| || || || | ||||| || Sbjct 5669 GCAACGGTTGATCTTTGCCGGTAAACAGTTGGAAGATGGCCGAACATTGAGTGATTATAA 5610 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| |||||||||||||| || ||| | || || | ||| | || || Sbjct 5609 TATCCAAAAAGAATCCACCCTCCATCTTGTCTTACGTCTACGTGGTGG 5562 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || || || ||||| | || ||| | ||||| || | || Sbjct 6016 ATGCAAATTTTTGTCAAAACCTTAACTGGTAAGACTATTACATTGGAAGTCGAACCATCG 5957 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || |||| ||||||| || |||||||| || ||||| || || Sbjct 5956 GACACGATTGAAAATGTGAAAGCAAAAATCCAAGATAAAGAAGGTATCCCACCAGATCAG 5897 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | |||||||| || |||||| | ||||||| || || | ||||| || Sbjct 5896 CAACGATTGATTTTTGCTGGTAAACAACTTGAAGATGGCCGTACATTATCTGATTATAAC 5837 Query 25179 ATTCAAAAAGAATCCACGCTACAT 25202 || ||||||||||| || || ||| Sbjct 5836 ATCCAAAAAGAATCTACTCTCCAT 5813 Score = 96.9 bits (106), Expect = 3e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 ||| |||||||| || || || || | || ||||| ||||||||||||||||||| ||| Sbjct 6371 AGGTATTCCACCAGATCAGCAACGTTTGATCTTTGCTGGCAAACAATTAGAAGATGGTCG 6312 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||| || |||||| ||||||||||| ||||| || | ||||| || Sbjct 6311 AACTTTGTCCGATTATAATATTCAAAAGGAATCTACATTGCATTTGGT 6264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433318990298390