Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1430 89.7 4e-13 seq1289 89.7 4e-13 seq1156 89.7 4e-13 seq954 89.7 4e-13 seq851 89.7 4e-13 seq839 89.7 4e-13 seq829 89.7 4e-13 seq803 89.7 4e-13 seq801 89.7 4e-13 seq789 89.7 4e-13 seq328 89.7 4e-13 seq1255 86.0 5e-12 >seq1430 Length=310067 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 121835 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 121776 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 | ||||||| || ||||||||||| ||| || ||||| Sbjct 121775 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 121738 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 121835 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 121776 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 | ||||||| || ||||||||||| ||| || ||||| Sbjct 121775 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 121738 >seq1289 Length=313075 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 293496 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 293437 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 | ||||||| || ||||||||||| ||| || ||||| Sbjct 293436 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 293399 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 293496 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 293437 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 | ||||||| || ||||||||||| ||| || ||||| Sbjct 293436 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 293399 >seq1156 Length=376316 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 22032 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 21973 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 | ||||||| || ||||||||||| ||| || ||||| Sbjct 21972 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 21935 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 22032 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 21973 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 | ||||||| || ||||||||||| ||| || ||||| Sbjct 21972 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 21935 >seq954 Length=66514 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 48141 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 48082 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 | ||||||| || ||||||||||| ||| || ||||| Sbjct 48081 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 48044 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 48141 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 48082 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 | ||||||| || ||||||||||| ||| || ||||| Sbjct 48081 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 48044 >seq851 Length=522413 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 510217 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 510158 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 | ||||||| || ||||||||||| ||| || ||||| Sbjct 510157 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 510120 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 510217 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 510158 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 | ||||||| || ||||||||||| ||| || ||||| Sbjct 510157 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 510120 >seq839 Length=72495 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 66562 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 66621 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 | ||||||| || ||||||||||| ||| || ||||| Sbjct 66622 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 66659 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 66562 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 66621 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 | ||||||| || ||||||||||| ||| || ||||| Sbjct 66622 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 66659 >seq829 Length=1740722 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 985584 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 985525 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 | ||||||| || ||||||||||| ||| || ||||| Sbjct 985524 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 985487 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 985584 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 985525 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 | ||||||| || ||||||||||| ||| || ||||| Sbjct 985524 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 985487 >seq803 Length=117798 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 105953 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 105894 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 | ||||||| || ||||||||||| ||| || ||||| Sbjct 105893 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 105856 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 105953 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 105894 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 | ||||||| || ||||||||||| ||| || ||||| Sbjct 105893 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 105856 >seq801 Length=119047 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 105979 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 105920 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 | ||||||| || ||||||||||| ||| || ||||| Sbjct 105919 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 105882 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 105979 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 105920 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 | ||||||| || ||||||||||| ||| || ||||| Sbjct 105919 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 105882 >seq789 Length=136861 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 89327 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 89268 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 | ||||||| || ||||||||||| ||| || ||||| Sbjct 89267 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 89230 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 89327 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 89268 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 | ||||||| || ||||||||||| ||| || ||||| Sbjct 89267 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 89230 >seq328 Length=1149099 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 907964 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 908023 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 | ||||||| || ||||||||||| ||| || ||||| Sbjct 908024 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 908061 Score = 89.7 bits (98), Expect = 4e-13 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||| |||| || || ||| || ||| | Sbjct 907964 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATC 908023 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 | ||||||| || ||||||||||| ||| || ||||| Sbjct 908024 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 908061 >seq1255 Length=349262 Score = 86.0 bits (94), Expect = 5e-12 Identities = 80/98 (82%), Gaps = 3/98 (3%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||| |||| || || ||| ||| || | Sbjct 322923 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAAG-AATC 322865 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 | ||||||| || ||||||||||| ||| || ||||| Sbjct 322864 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 322827 Score = 86.0 bits (94), Expect = 5e-12 Identities = 80/98 (82%), Gaps = 3/98 (3%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||| |||| || || ||| ||| || | Sbjct 322923 CATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAAG-AATC 322865 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 | ||||||| || ||||||||||| ||| || ||||| Sbjct 322864 ATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 322827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397054144328212