Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1179 150 2e-31 seq1123 145 8e-30 seq1705 125 7e-24 seq1489 125 7e-24 seq1658 122 9e-23 >seq1179 Length=350002 Score = 150 bits (166), Expect = 2e-31 Identities = 465/712 (65%), Gaps = 13/712 (2%) Strand=Plus/Minus Query 154587 GACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTG--TATTGCACAATTTCTGCGC 154644 || ||||| || |||||||||||||| |||| || || |||| |||||||| | | Sbjct 62367 GAAGCCAAATTACAAACGGCAATTTCATCAG--CTGATGAATATTCAACAATTTCCGTAC 62310 Query 154645 ACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGT 154704 | | ||| ||| ||||| |||| |||| ||||| ||||| || || | Sbjct 62309 AAAGATTTGAACATTTGATGGTTCCCAAATTTTGTTGATTTGATTTACGATTACAATGAT 62250 Query 154705 CTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAAACA 154764 |||| || | ||||| || || || ||||| | ||| | || | ||| | | || || Sbjct 62249 CTTTATATACCATGTATGGAGTACCAGTTTCAATTTGTGCATCCAAAATGG--CAAACCA 62192 Query 154765 GACTTC--GCGCCTCAACTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAG 154822 | || | || | ||||| | | | ||| ||| | |||||||||||| || || Sbjct 62191 TAAATCATGTGCTTTCACTTGTGACCGATAACGACCTTCACGCTCATATTGTTCATATAG 62132 Query 154823 TTTTTCAAACTCTAAACTGTACACGTCCGACAAA-CCGGGACAGCGGTCGGGACACATCA 154881 ||||| || ||| || | || | | || |||||||| | |||||||||| Sbjct 62131 CTTTTCGAATTCTTCACCCCA-ACATTCATGAAGTCCGGGACATTCATTTGGACACATCA 62073 Query 154882 ATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGT 154941 |||||||||| | | || || |||||||||||||||||||| | |||||| || | Sbjct 62072 ATGACCACATACCATCCATTTCAACACGTTTCATAAACAAATCCGGTATCCACAATGCAT 62013 Query 154942 ACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAAT 155001 | || | ||||| || | ||||| | || | || |||| || |||||| Sbjct 62012 AGAATAGGTCACGTGCACGTAGCTCTTCGGAACCAGTATTCTTTTTTAGATCCAAAAAGG 61953 Query 155002 CATATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGTTTT---C 155058 || | || || || ||||| ||||| ||||| | || | || ||| |||||| | Sbjct 61952 CAAAAATATCTGCATGCCATGGCTCCAAATAGATAGCAAATGCACCTGGACGTTTTCCAC 61893 Query 155059 CTCCTTGATCCACGTGACGCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGC 155118 | ||||||||||| | ||| || |||||| | || || |||| |||| | | || Sbjct 61892 CACCTTGATCCACATAACGTGCAGTGTTATTGAATACACGTAACATTGGTACTAAACCAT 61833 Query 155119 TGGCCGTGCCGTTGGTGCCACGTATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAA 155178 ||| || || || ||| || || | | ||| ||||||||||| Sbjct 61832 TGGAAAAACCATTCGTACCAGCAATATATGAACCATGTGAACGAATACAATGAACATTAA 61773 Query 155179 CGCCCAAACCTCCGCCGTATTTAGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTC 155238 ||| | ||| ||| | |||| || || ||||| | ||| || || || || | Sbjct 61772 GGCCAATACCACCGGCAGATTTCGAAATAATTGCACATTGTTTCAATGTATCATAGATGC 61713 Query 155239 CTTTGATGCTGTCTTCTTTCAACGTCAACAAGAAACACGAAGATAATTGAGG 155290 ||| ||||| || || || ||||| |||||||| || || | ||| || Sbjct 61712 CTTCAATGCTATCATCGCCCATTGTCAATAAGAAACAAGATGACATTTGTGG 61661 >seq1123 Length=366939 Score = 145 bits (160), Expect = 8e-30 Identities = 863/1380 (63%), Gaps = 27/1380 (2%) Strand=Plus/Plus Query 154064 ATTGCTGGTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGT 154123 ||| || || | || || || ||||| ||||| || | ||||| ||||| | ||||| Sbjct 23524 ATTACTTGTATATGGTTCAAAAGATTCATTGTTCCCAAGAATTTGTGCTGTCGAAGCTGT 23583 Query 154124 GGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAA 154183 ||||| || || | |||| ||||| | ||| ||||||||||| || ||| || Sbjct 23584 AGGCATTGGAGCTACAAGCAAACTATTTCGTATACCATGTTTTGCAATTCGAGCTTTCAA 23643 Query 154184 ATCTGCCCAATTCCACA-AGTTGGTAGGTTGCACG-TTCCACATGTCGTATTGCAAAACA 154241 ||| ||||||||| | || || | ||||| ||| ||||||||||| | || | || | Sbjct 23644 ATCGTTCCAATTCCAAAGAGATGTT-GGTTG-ACGATTCCACATGTCAAACTGTAGAATA 23701 Query 154242 CCCAAACTCGCCGGACTGTCACT--ATAACTAGAGTACGGCCCGTTCAGTTTTGCCAAGT 154299 | | | || || || ||| | || || || || ||| ||||| | Sbjct 23702 CTTTTAGATACTGG--TGATCCTTCATACGTTTCATATGGACCATTTCGTTCAGCCAATT 23759 Query 154300 CGCAACTGGCTTCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTT 154359 | ||||| |||||||| || |||| || | ||||| ||| || | || | || | Sbjct 23760 CACAACTTGCTTCTAATGCACCATAATAAATTGTTTCAAAAATCTGAATATTGAGCAATC 23819 Query 154360 TGGCTTTGTCACTTTCGTACGGCAATCCCAATATACAAAAAGCATCGGCGAGCCCTTGAA 154419 |||| ||||||||||| || | | || || | || |||||||| | ||||||| Sbjct 23820 GAGCTTCTTCACTTTCGTATGGATAACGCATTAGAATGAATGCATCGGCCAAACCTTGAA 23879 Query 154420 TGCCCACTCCAACGGGTCTGTGTTTTAAATTCGATTCTTTGGCAGCCTCCAGAGGATAAT 154479 || | || | |||| || | |||||| | | || || | ||||||| Sbjct 23880 CACCGATACCTATCGGTCGATGACGAAGATTCGAATATCGTGCTTCCGGTACGGGATAAT 23939 Query 154480 AATTGATATCGATAATTTTATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATG 154539 || | | ||| |||| ||| |||| || Sbjct 23940 AAGTAACATCAATAACTTTGTTTAGATTACGAGTGACAACTTTAACAATCGATTTCAATT 23999 Query 154540 CGACAAAATCAAACACTCCGCTTTTA--ATAAAACGATTTACACACA-CA---GACGCCA 154593 ||||||| | | || ||||| || || |||| || | || || || | Sbjct 24000 TTTTAAAATCATAGATTCGATTTTTATGATCAACAAATTTGTTCAAAGCAATCGAGGCTA 24059 Query 154594 AGTTGCAAACGGCAATTTCTTC---AGAACTACTGTATTGCACAATTTCTGCGCACAAAT 154650 | || || || |||||||| || ||| | |||| |||||| || | || | || Sbjct 24060 AATTACAGACAGCAATTTCATCTTTAGATGAA---TATTCCACAATCTCCGTACAAAGAT 24116 Query 154651 TACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCTTTGT 154710 || ||| || || || || |||| ||||| ||||| || || || || | Sbjct 24117 TAGAACATTTGATTGTACCAAGATTTTGTTGATTTGATTTACGATTACAATGATCCTTAT 24176 Query 154711 ACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAAACAGACTTC 154770 | | || ||||| ||||| ||||| | ||| | ||||||||| | || || | || Sbjct 24177 AAACCATATACGGTGTGCCAGTTTCGATTTGTGATTCAATAATGGAA--AACCAAAGATC 24234 Query 154771 GCGC-CTCAAC-TTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGTTTTTC 154828 || | | || ||| | | |||| ||||| | ||||| ||||| || || ||||| Sbjct 24235 ACGAGCACGACATTGTGATCGATATCGTTTTTCATTTTCATAATGTTCATATAGCTTTTC 24294 Query 154829 AAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAATGACCA 154888 ||| ||| || | || | || || ||||| | ||||||||||||||||| Sbjct 24295 AAATTCTTCACCCCAACAATCAAATAATCCAGGACACTCATTCGGACACATCAATGACCA 24354 Query 154889 CATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAA 154948 |||| | | ||| | || |||||||| || ||||| || | ||| | || || || || Sbjct 24355 CATTGCATCTTGATCCACACGTTTCATGAATAAATCAGGAATCCAAAGGGCATAAAATAA 24414 Query 154949 ATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATCATATAT 155008 |||||| || | ||||| | || | ||| | ||| | ||||||| | || Sbjct 24415 ATCACGTGCACGTAATTCTTCGGATCCGGTATTTTTACGAAGATTTATAAAATCAAAGAT 24474 Query 155009 GTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGT---TTTCCTCCTTG 155065 || | ||||| || |||| ||| | ||| | || || ||| || || ||||| Sbjct 24475 ATCCGAATGCCATGGTTCTAGATAGATGGCAAATGCTCCAGGACGTTTGTTGCCACCTTG 24534 Query 155066 ATCCACGTGACGCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGGCCGT 155125 ||| || | || | ||||||||| || || |||| || ||| ||| | | Sbjct 24535 ATCAACATATCGAGCCGTATTATTGTATACACGTAACATAGGAACCAAGCCATTAGAAAA 24594 Query 155126 GCCGTTGGTGCCACGTATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAACGCCCAA 155185 || || || || || || || || || ||||||||||| || | Sbjct 24595 TCCATTCGTACCGGCAATATAACTACCAGAAGATCGGATACAATGAACATTAAGACCAAT 24654 Query 155186 ACCTCCGCCGTATTTAGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTCCTTTGAT 155245 ||| || | |||| || || ||||| | | || || || || |||| || Sbjct 24655 ACCGCCAGCTGATTTTGAAATAATGGCACAATTTTTAAGGGTATCATATATACCTTCAAT 24714 Query 155246 GCTGTCTTCTTTCAACGTCAACAAGAAACACGAAGATAATTGAGGTTGAGGGCAGCCGGC 155305 || || || ||| || | || ||||| || |||||||| || | |||||| Sbjct 24715 ACTATCATCACTCATAGTAAGCAGAAAACATGATGATAATTGTGGCCGTTTTGTGCCGGC 24774 Query 155306 CGCAAATAATGTAGGACTAGCGTGTGTAAACATTTTGTTGGCGGTTAAGTTGTAAGTTTC 155365 ||| |||||||| || ||||||||| || | | | |||| || || ||||| Sbjct 24775 ATTAAACAATGTAGGTGATGCATGTGTAAACCAATTTTCCGAGATTAAATTATACGTTTC 24834 Query 155366 GATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGCATGTGTTG 155425 |||||||| || || ||| ||| || ||||| || || ||||||| ||| ||||| Sbjct 24835 AATGGCGGCATCGATATCATCACCATGAATACCAATAGCACAACGCATCAACATATGTTG 24894 >seq1705 Length=717327 Score = 125 bits (138), Expect = 7e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTC 64293 ||| ||||| | || ||||||||||| ||||||||||| | ||| || | ||||| Sbjct 502638 CACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACTCAAGGTTCGGCCATCTTC 502579 Query 64294 AAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353 | ||| || |||||| |||| | |||||||| || || || ||||||||||| ||||| Sbjct 502578 CAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTGGGATTCCTTCTTTATCTTG 502519 Query 64354 TATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCT 64412 ||||| ||||| ||| || | |||||| | || ||||| | || | || | Sbjct 502518 AATTTTG-GCTTTCACATTTTCGATTGTATCTGATGGCTCAACTTCCAATGTAATTGTTT 502460 Query 64413 TGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || |||||||| || |||||||||||||| Sbjct 502459 TACCAGTCAAAGTCTTGACGAAAATTTGCAT 502429 Score = 122 bits (134), Expect = 9e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || |||||||| |||||||||||||| | | || || | ||| Sbjct 502868 AGTACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAATCGGACAAAGTACGGCCATCT 502809 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | || || |||||| |||| | ||| ||||| || || || || |||||||| ||| Sbjct 502808 TCCAATTGTTTACCGGCAAAAATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGTCT 502749 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| |||||| || | ||||| | |||||||| | || | || Sbjct 502748 TGAATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCCACTTCCAAGGTGATTGTT 502689 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || ||||||||||||||||| |||||||| Sbjct 502688 TTACCAGTCAAAGTTTTTACGAATATTTGCAT 502657 Score = 113 bits (124), Expect = 5e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||||| || ||||| ||||| ||||||||||| | | || || | || || Sbjct 501953 ACGAGATGAAGGGTGGATTCCTTTTGGATGTTGTAATCGGACAAAGTTCGACCATCCTCC 501894 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 | ||||| || ||| | || | || |||||||| || || || |||||||| ||||| Sbjct 501893 AATTGCTTTCCAGCAAAGATCAATCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGG 501834 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 | |||| ||||| ||| || | || ||| | |||||||| | || | ||| || Sbjct 501833 A-TTTTAGCTTTGACATTTTCAATAGTGTCAGATGGTTCCACTTCCAATGTAATGGTTTT 501775 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || ||||| ||||| ||||||||||||||| Sbjct 501774 ACCAGTCAATGTTTTCACGAAAATTTGCATT 501744 Score = 107 bits (118), Expect = 2e-18 Identities = 155/215 (72%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 64230 TAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGT 64289 |||| || ||||| | || ||||||||||| || || ||||| | || || | | Sbjct 502413 TAAG-ACAAGATGGAGGGTGGATTCTTTTTGGATATTATAATCACTCAATGTTCGGCCAT 502355 Query 64290 CTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTT 64349 |||| | ||| || |||||| | || | ||| ||||| || || || || |||||||| | Sbjct 502354 CTTCCAACTGTTTACCGGCAAAGATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGT 502295 Query 64350 CTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 | || | |||| ||||| ||| || | ||||| | || ||||| | || | | Sbjct 502294 CCTG-AATTTTAGCTTTCACATTTTCAATGGTATCGGATGGCTCGACTTCCAATGTAATG 502236 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||||||| ||||| || ||||||||||| Sbjct 502235 GTCTTGCCGGTCAATGTTTTGACAAAAATTTGCAT 502201 Score = 102 bits (112), Expect = 8e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||| | || ||||||||||| ||||| ||||| | | || || | |||||| Sbjct 502181 ACAAGATGGAGAGTAGATTCTTTTTGGATGTTATAATCAGATAATGTACGGCCATCTTCA 502122 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 || || || || ||| |||| | || ||||| || || || || |||||||| ||||| Sbjct 502121 AGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCTGGTGGGATACCTTCTTTATCTTGG 502062 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 | |||||||||| ||| || | || || | || ||||| | || | ||||| Sbjct 502061 A-TTTTTGCTTTCACATTTTCAATCGTGTCCGATGGTTCGACTTCCAATGTAATAGTCTT 502003 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || ||||| || ||||||||||| Sbjct 502002 ACCAGTTAAGGTTTTGACAAAAATTTGCAT 501973 >seq1489 Length=23360 Score = 125 bits (138), Expect = 7e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTC 64293 ||| ||||| | || ||||||||||| ||||||||||| | ||| || | ||||| Sbjct 5351 CACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACTCAAGGTTCGGCCATCTTC 5410 Query 64294 AAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353 | ||| || |||||| |||| | |||||||| || || || ||||||||||| ||||| Sbjct 5411 CAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTGGGATTCCTTCTTTATCTTG 5470 Query 64354 TATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCT 64412 | |||| ||||| ||| || | |||||| | || ||||| | || | || | Sbjct 5471 -AATTTTGGCTTTCACATTTTCGATTGTATCTGATGGCTCAACTTCCAATGTAATTGTTT 5529 Query 64413 TGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || |||||||| || |||||||||||||| Sbjct 5530 TACCAGTCAAAGTCTTGACGAAAATTTGCAT 5560 Score = 122 bits (134), Expect = 9e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || |||||||| |||||||||||||| | | || || | ||| Sbjct 5121 AGTACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAATCGGACAAAGTACGGCCATCT 5180 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | || || |||||| |||| | ||| ||||| || || || || |||||||| ||| Sbjct 5181 TCCAATTGTTTACCGGCAAAAATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGTCT 5240 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| |||||| || | ||||| | |||||||| | || | || Sbjct 5241 TGAATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCCACTTCCAAGGTGATTGTT 5300 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || ||||||||||||||||| |||||||| Sbjct 5301 TTACCAGTCAAAGTTTTTACGAATATTTGCAT 5332 Score = 113 bits (124), Expect = 5e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||||| || ||||| ||||| ||||||||||| | | || || | || || Sbjct 6036 ACGAGATGAAGGGTGGATTCCTTTTGGATGTTGTAATCGGACAAAGTTCGACCATCCTCC 6095 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 | ||||| || ||| | || | || |||||||| || || || |||||||| ||||| Sbjct 6096 AATTGCTTTCCAGCAAAGATCAATCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGG 6155 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 | |||| ||||| ||| || | || ||| | |||||||| | || | ||| || Sbjct 6156 A-TTTTAGCTTTGACATTTTCAATAGTGTCAGATGGTTCCACTTCCAATGTAATGGTTTT 6214 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || ||||| ||||| ||||||||||||||| Sbjct 6215 ACCAGTCAATGTTTTCACGAAAATTTGCATT 6245 Score = 107 bits (118), Expect = 2e-18 Identities = 155/215 (72%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 64230 TAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGT 64289 |||| || ||||| | || ||||||||||| || || ||||| | || || | | Sbjct 5576 TAAG-ACAAGATGGAGGGTGGATTCTTTTTGGATATTATAATCACTCAATGTTCGGCCAT 5634 Query 64290 CTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTT 64349 |||| | ||| || |||||| | || | ||| ||||| || || || || |||||||| | Sbjct 5635 CTTCCAACTGTTTACCGGCAAAGATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGT 5694 Query 64350 CTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 | || | |||| ||||| ||| || | ||||| | || ||||| | || | | Sbjct 5695 CCTG-AATTTTAGCTTTCACATTTTCAATGGTATCGGATGGCTCGACTTCCAATGTAATG 5753 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||||||| ||||| || ||||||||||| Sbjct 5754 GTCTTGCCGGTCAATGTTTTGACAAAAATTTGCAT 5788 Score = 102 bits (112), Expect = 8e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||| | || ||||||||||| ||||| ||||| | | || || | |||||| Sbjct 5808 ACAAGATGGAGAGTAGATTCTTTTTGGATGTTATAATCAGATAATGTACGGCCATCTTCA 5867 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 || || || || ||| |||| | || ||||| || || || || |||||||| ||||| Sbjct 5868 AGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCTGGTGGGATACCTTCTTTATCTTGG 5927 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 | |||||||||| ||| || | || || | || ||||| | || | ||||| Sbjct 5928 A-TTTTTGCTTTCACATTTTCAATCGTGTCCGATGGTTCGACTTCCAATGTAATAGTCTT 5986 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || ||||| || ||||||||||| Sbjct 5987 ACCAGTTAAGGTTTTGACAAAAATTTGCAT 6016 >seq1658 Length=21299 Score = 122 bits (134), Expect = 9e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || |||||||| |||||||||||||| | | || || | ||| Sbjct 18302 AGTACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAATCGGACAAAGTACGGCCATCT 18243 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | || || |||||| |||| | ||| ||||| || || || || |||||||| ||| Sbjct 18242 TCCAATTGTTTACCGGCAAAAATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGTCT 18183 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| |||||| || | ||||| | |||||||| | || | || Sbjct 18182 TGAATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCCACTTCCAAGGTGATTGTT 18123 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || ||||||||||||||||| |||||||| Sbjct 18122 TTACCAGTCAAAGTTTTTACGAATATTTGCAT 18091 Score = 120 bits (132), Expect = 3e-22 Identities = 155/212 (73%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTC 64293 ||| ||||| | || ||||||||||| ||||||||||| | ||| || | ||||| Sbjct 18072 CACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACTCAAGGTTCGGCCATCTTC 18013 Query 64294 AAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353 | ||| || |||||| |||| | |||||||| || || || ||||||||||| ||||| Sbjct 18012 CAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTGGGATTCCTTCTTTATCTTG 17953 Query 64354 TATTTTTTGCTTT--ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 | |||| ||||| ||| || | |||||| | || ||||| | || | || Sbjct 17952 -AATTTTGGCTTTTCACATTTTCGATTGTATCTGATGGCTCAACTTCCAATGTAATTGTT 17894 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || |||||||| || ||||| |||||||| Sbjct 17893 TTACCAGTCAAAGTCTTGACGAATATTTGCAT 17862 Score = 113 bits (124), Expect = 5e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||||| || ||||||||||||||||||||||| | | || || | || || Sbjct 17385 ACAAGATGAAGGGTGGATTCTTTTTGAATGTTGTAATCAGACAAAGTTCGACCATCCTCC 17326 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 | ||||| |||||| | || | ||| ||||| || || || || |||||||| ||||| Sbjct 17325 AATTGCTTTCCGGCAAAGATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGTCTTGG 17266 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 | |||| ||||| ||| || | || || | |||||||| | || | ||| || Sbjct 17265 A-TTTTAGCTTTGACATTTTCAATAGTGTCCGATGGTTCCACTTCCAATGTAATGGTTTT 17207 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || || || ||||| || |||||||||||| Sbjct 17206 ACCAGTTAAGGTTTTGACAAAAATTTGCATT 17176 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTC 64293 ||| ||||| | || ||||||||||| || || ||||| | || | | ||||| Sbjct 17843 CACAAGATGGAGAGTAGATTCTTTTTGGATATTATAATCACTCAATGTTCTGCCATCTTC 17784 Query 64294 AAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353 | || || |||||| |||| | || || || || || |||||||||||||| || || Sbjct 17783 CAATTGTTTACCGGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTTGTCCTG 17724 Query 64354 TATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCT 64412 ||||| ||||| || || | ||||| | || ||||| | ||| | ||| | Sbjct 17723 GATTTTA-GCTTTCACGTTTTCAATGGTATCTGATGGCTCGACTTCCAAAGTAATGGTTT 17665 Query 64413 TGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||| ||||| || ||||||||||| Sbjct 17664 TGCCGGTCAATGTTTTGACAAAAATTTGCAT 17634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499634145074640