Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1658 82.4 5e-11 >seq1658 Length=21299 Score = 82.4 bits (90), Expect = 5e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || ||||||||||| |||| | || |||| || ||||| || || || || Sbjct 17596 TCCTTTTGGATGTTATAGTCAGATAATGTACGGCCATCTTCAAGTTGTTTACCAGCAAAA 17537 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||||||||| ||| | || | ||||| || || | |||||| ||| || | Sbjct 17536 ATCAATCGTTGCTGATCTGGTGGAATACCCTCTTTATCTTGGATTTTTGCTTTCACATTT 17477 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| || | ||||| || | || || ||||| || || | ||| || ||| Sbjct 17476 TCAATCGTGTCCGATGGTTCGACTTCCAGTGTAATAGTCTTACCAGTTAAGGTTTTGACA 17417 Query 34967 AAGATCTG 34974 ||||| || Sbjct 17416 AAGATTTG 17409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325686028236014