Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1658 167 2e-36 seq1705 165 6e-36 seq1489 165 6e-36 >seq1658 Length=21299 Score = 167 bits (184), Expect = 2e-36 Identities = 160/205 (78%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 |||||| |||||||||||||||||||| ||||| | | || ||| ||| || | ||| Sbjct 17380 ATGAAGGGTGGATTCTTTTTGAATGTTGTAATCAGACAAAGTTCGACCATCCTCCAATTG 17321 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 || || ||| | ||||| | ||||||||| || || ||||| ||||||||||| | ||| Sbjct 17320 CTTTCCGGCAAAGATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGTCTTGGATTTT 17261 Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 ||||||| |||| | |||||| || |||| ||||| | || || ||||| ||||| Sbjct 17260 AGCTTTGACATTTTCAATAGTGTCCGATGGTTCCACTTCCAATGTAATGGTTTTACCAGT 17201 Query 29763 TAAGGTTTTAACAAATATCTGCATT 29787 ||||||||| ||||| || |||||| Sbjct 17200 TAAGGTTTTGACAAAAATTTGCATT 17176 Score = 165 bits (182), Expect = 6e-36 Identities = 157/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 ||| || |||||||| ||||| |||||||| || | | || || ||| || ||||| Sbjct 17609 ATGGAGAGTGGATTCCTTTTGGATGTTATAGTCAGATAATGTACGGCCATCTTCAAGTTG 17550 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||| |||||| | ||||||| ||||||||| || |||||||||||||| ||||| | ||| Sbjct 17549 TTTACCAGCAAAAATCAATCGTTGCTGATCTGGTGGAATACCCTCTTTATCTTGGATTTT 17490 Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | ||| ||| |||| | ||||| || |||| ||||| || || ||||| || ||||| Sbjct 17489 TGCTTTCACATTTTCAATCGTGTCCGATGGTTCGACTTCCAGTGTAATAGTCTTACCAGT 17430 Query 29763 TAAGGTTTTAACAAATATCTG 29783 ||||||||| ||||| || || Sbjct 17429 TAAGGTTTTGACAAAGATTTG 17409 Score = 147 bits (162), Expect = 2e-30 Identities = 182/244 (75%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 29544 ATCATTTTATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTG 29603 |||||||| | ||| ||| || | | ||||| || | ||| || ||||||||||| || Sbjct 18331 ATCATTTT-TAGTT-TCCACCACGAAGTCGCAGTACAAGATGGAGGGTGGATTCTTTCTG 18274 Query 29604 AATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCT 29663 |||||| ||||| | | || || ||| || | |||||| || ||| | ||||| | Sbjct 18273 AATGTTGTAATCGGACAAAGTACGGCCATCTTCCAATTGTTTACCGGCAAAAATCAACCG 18214 Query 29664 TTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAG 29722 ||||||||| || || ||||| ||||||||||| |||||| | ||| ||| |||| | | Sbjct 18213 TTGCTGATCTGGTGGGATACCTTCTTTGTCTTG-AATTTTAGCTTTTACATTTTCAATGG 18155 Query 29723 TGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCT 29782 | || || |||| ||||| | || || ||||| ||||| || ||||| || ||||| | Sbjct 18154 TATCCGATGGTTCCACTTCCAAGGTGATTGTTTTACCAGTCAAAGTTTTTACGAATATTT 18095 Query 29783 GCAT 29786 |||| Sbjct 18094 GCAT 18091 Score = 125 bits (138), Expect = 6e-24 Identities = 162/219 (74%), Gaps = 5/219 (2%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAG 29629 ||||| ||| | ||| || |||||||||||||| ||||| ||||| | ||| ||| || Sbjct 18078 ACGCAACACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACTCAA-GGTTCGGC 18020 Query 29630 AATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTT 29689 ||| || | ||||| || ||| | ||||||| |||||||| || || || || |||| Sbjct 18019 CATCTTCCAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTGGGATTCCTTCTT 17960 Query 29690 TGTCTTGTAATTTTTG--TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGT 29747 | ||||| |||||| | ||| ||| |||| | || || || | || ||||| | || Sbjct 17959 TATCTTG-AATTTTGGCTTTTCACATTTTCGATTGTATCTGATGGCTCAACTTCCAATGT 17901 Query 29748 TATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| ||||| || || || || ||||| ||||| Sbjct 17900 AATTGTTTTACCAGTCAAAGTCTTGACGAATATTTGCAT 17862 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAG 29629 ||||| ||| | ||| || || ||||||||||| || |||||||| | |||| || | Sbjct 17849 ACGCAACACAAGATGGAGAGTAGATTCTTTTTGGATATTATAATCACTCAAT-GTTCTGC 17791 Query 29630 AATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTT 29689 ||| || | |||||| || ||| | ||||| | ||| ||||| || ||||| || |||| Sbjct 17790 CATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTT 17731 Query 29690 TGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||| || | ||| ||| || |||| | || || || | || ||||| | ||| | Sbjct 17730 TGTCCTGGATTTTAGCTTTCACGTTTTCAATGGTATCTGATGGCTCGACTTCCAAAGTAA 17671 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | |||||||| || || ||||| ||||| || ||||| Sbjct 17670 TGGTTTTGCCGGTCAATGTTTTGACAAAAATTTGCAT 17634 Score = 104 bits (114), Expect = 2e-17 Identities = 100/126 (79%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-C 29618 ||||| | | ||| || |||||||| | || ||||||||||||||||||||||| | | Sbjct 16875 CCTCCACGAAGACGAAGTACCAAATGCAATGTCGATTCTTTTTGAATGTTATAATCGGAC 16816 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 ||| || || ||| || | |||||| |||||| | ||||||| ||||||||| || || Sbjct 16815 AAT-GTACGGCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCGTTGCTGATCTGGTGG 16757 Query 29679 AATACC 29684 |||||| Sbjct 16756 AATACC 16751 Score = 93.3 bits (102), Expect = 3e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| |||||||| | || |||||||||||||| || ||||| | | || ||| Sbjct 17164 ACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCGGACAAAGTTCGACC 17105 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACC 29684 ||| || | ||||||||||||| | ||||| | ||||||||| || |||||||| Sbjct 17104 ATCTTCTAATTGTTTGCCAGCAAAGATCAAACGTTGCTGATCTGGTGGAATACC 17051 >seq1705 Length=717327 Score = 165 bits (182), Expect = 6e-36 Identities = 166/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| || | ||| || || ||||||||||| ||||||||||| | | || || Sbjct 502188 ACGCAAGACAAGATGGAGAGTAGATTCTTTTTGGATGTTATAATCAGATAATGTACGGCC 502129 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| |||||| | ||||||| ||||||||| || || ||||| ||||| Sbjct 502128 ATCTTCAAGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCTGGTGGGATACCTTCTTT 502069 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | |||| ||| ||| |||| | ||||| || |||| ||||| | || || Sbjct 502068 ATCTTGGATTTTTGCTTTCACATTTTCAATCGTGTCCGATGGTTCGACTTCCAATGTAAT 502009 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || |||||||||||||| ||||| || ||||| Sbjct 502008 AGTCTTACCAGTTAAGGTTTTGACAAAAATTTGCAT 501973 Score = 147 bits (162), Expect = 2e-30 Identities = 182/244 (75%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 29544 ATCATTTTATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTG 29603 |||||||| | ||| ||| || | | ||||| || | ||| || ||||||||||| || Sbjct 502897 ATCATTTT-TAGTT-TCCACCACGAAGTCGCAGTACAAGATGGAGGGTGGATTCTTTCTG 502840 Query 29604 AATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCT 29663 |||||| ||||| | | || || ||| || | |||||| || ||| | ||||| | Sbjct 502839 AATGTTGTAATCGGACAAAGTACGGCCATCTTCCAATTGTTTACCGGCAAAAATCAACCG 502780 Query 29664 TTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAG 29722 ||||||||| || || ||||| ||||||||||| |||||| | ||| ||| |||| | | Sbjct 502779 TTGCTGATCTGGTGGGATACCTTCTTTGTCTTG-AATTTTAGCTTTTACATTTTCAATGG 502721 Query 29723 TGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCT 29782 | || || |||| ||||| | || || ||||| ||||| || ||||| || ||||| | Sbjct 502720 TATCCGATGGTTCCACTTCCAAGGTGATTGTTTTACCAGTCAAAGTTTTTACGAATATTT 502661 Query 29783 GCAT 29786 |||| Sbjct 502660 GCAT 502657 Score = 123 bits (136), Expect = 2e-23 Identities = 154/206 (75%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGAATCATCGAGTT 29641 ||| || |||||||||||||| || |||||||| | |||| || || ||| || | | Sbjct 502404 ATGGAGGGTGGATTCTTTTTGGATATTATAATCACTCAAT-GTTCGGCCATCTTCCAACT 502346 Query 29642 GTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATT 29701 |||| || ||| | ||||| | ||||||||| || || ||||| |||||||| || |||| Sbjct 502345 GTTTACCGGCAAAGATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGTCCTG-AATT 502287 Query 29702 TTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCA 29760 || | ||| ||| |||| | || || || | || ||||| | || || || ||||| Sbjct 502286 TTAGCTTTCACATTTTCAATGGTATCGGATGGCTCGACTTCCAATGTAATGGTCTTGCCG 502227 Query 29761 GTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| ||||| || ||||| Sbjct 502226 GTCAATGTTTTGACAAAAATTTGCAT 502201 Score = 118 bits (130), Expect = 8e-22 Identities = 160/218 (73%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAG 29629 ||| | ||| | ||| || |||||||||||||| ||||| ||||| | ||| ||| || Sbjct 502644 ACGTAACACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACTCAA-GGTTCGGC 502586 Query 29630 AATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTT 29689 ||| || | ||||| || ||| | ||||||| |||||||| || || || || |||| Sbjct 502585 CATCTTCCAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTGGGATTCCTTCTT 502526 Query 29690 TGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748 | ||||| |||||| | ||| ||| |||| | || || || | || ||||| | || Sbjct 502525 TATCTTG-AATTTTGGCTTTCACATTTTCGATTGTATCTGATGGCTCAACTTCCAATGTA 502467 Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| ||||| || || || || || || ||||| Sbjct 502466 ATTGTTTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 502429 Score = 105 bits (116), Expect = 5e-18 Identities = 94/115 (82%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAG 29629 ||| || |||||||| | || ||||||||||||||||||||||| | ||||| | || Sbjct 501432 ACGAAGTACCAAATGCAATGTCGATTCTTTTTGAATGTTATAATCGGACAATG-TACGGC 501374 Query 29630 AATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACC 29684 ||| || | |||||| |||||| | ||||||||||||||||| || |||||||| Sbjct 501373 CATCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGCTGATCTGGTGGAATACC 501319 Score = 93.3 bits (102), Expect = 3e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| |||||||| | || ||||| |||||||| |||||||| | | || ||| Sbjct 501732 ACGCAATACCAAATGCAATGTAGATTCCTTTTGAATATTATAATCGGACAAAGTTCGACC 501673 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACC 29684 ||| || | ||||||||||||| | ||||| | ||||||||| || |||||||| Sbjct 501672 ATCTTCTAATTGTTTGCCAGCAAAGATCAAACGTTGCTGATCTGGTGGAATACC 501619 >seq1489 Length=23360 Score = 165 bits (182), Expect = 6e-36 Identities = 166/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| || | ||| || || ||||||||||| ||||||||||| | | || || Sbjct 5801 ACGCAAGACAAGATGGAGAGTAGATTCTTTTTGGATGTTATAATCAGATAATGTACGGCC 5860 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| |||||| | ||||||| ||||||||| || || ||||| ||||| Sbjct 5861 ATCTTCAAGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCTGGTGGGATACCTTCTTT 5920 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | |||| ||| ||| |||| | ||||| || |||| ||||| | || || Sbjct 5921 ATCTTGGATTTTTGCTTTCACATTTTCAATCGTGTCCGATGGTTCGACTTCCAATGTAAT 5980 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || |||||||||||||| ||||| || ||||| Sbjct 5981 AGTCTTACCAGTTAAGGTTTTGACAAAAATTTGCAT 6016 Score = 147 bits (162), Expect = 2e-30 Identities = 182/244 (75%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 29544 ATCATTTTATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTG 29603 |||||||| | ||| ||| || | | ||||| || | ||| || ||||||||||| || Sbjct 5092 ATCATTTT-TAGTT-TCCACCACGAAGTCGCAGTACAAGATGGAGGGTGGATTCTTTCTG 5149 Query 29604 AATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCT 29663 |||||| ||||| | | || || ||| || | |||||| || ||| | ||||| | Sbjct 5150 AATGTTGTAATCGGACAAAGTACGGCCATCTTCCAATTGTTTACCGGCAAAAATCAACCG 5209 Query 29664 TTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAG 29722 ||||||||| || || ||||| ||||||||||| |||||| | ||| ||| |||| | | Sbjct 5210 TTGCTGATCTGGTGGGATACCTTCTTTGTCTTG-AATTTTAGCTTTTACATTTTCAATGG 5268 Query 29723 TGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCT 29782 | || || |||| ||||| | || || ||||| ||||| || ||||| || ||||| | Sbjct 5269 TATCCGATGGTTCCACTTCCAAGGTGATTGTTTTACCAGTCAAAGTTTTTACGAATATTT 5328 Query 29783 GCAT 29786 |||| Sbjct 5329 GCAT 5332 Score = 123 bits (136), Expect = 2e-23 Identities = 154/206 (75%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGAATCATCGAGTT 29641 ||| || |||||||||||||| || |||||||| | |||| || || ||| || | | Sbjct 5585 ATGGAGGGTGGATTCTTTTTGGATATTATAATCACTCAAT-GTTCGGCCATCTTCCAACT 5643 Query 29642 GTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATT 29701 |||| || ||| | ||||| | ||||||||| || || ||||| |||||||| || |||| Sbjct 5644 GTTTACCGGCAAAGATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGTCCTG-AATT 5702 Query 29702 TTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCA 29760 || | ||| ||| |||| | || || || | || ||||| | || || || ||||| Sbjct 5703 TTAGCTTTCACATTTTCAATGGTATCGGATGGCTCGACTTCCAATGTAATGGTCTTGCCG 5762 Query 29761 GTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| ||||| || ||||| Sbjct 5763 GTCAATGTTTTGACAAAAATTTGCAT 5788 Score = 118 bits (130), Expect = 8e-22 Identities = 160/218 (73%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAG 29629 ||| | ||| | ||| || |||||||||||||| ||||| ||||| | ||| ||| || Sbjct 5345 ACGTAACACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACTCAA-GGTTCGGC 5403 Query 29630 AATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTT 29689 ||| || | ||||| || ||| | ||||||| |||||||| || || || || |||| Sbjct 5404 CATCTTCCAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTGGGATTCCTTCTT 5463 Query 29690 TGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748 | ||||| |||||| | ||| ||| |||| | || || || | || ||||| | || Sbjct 5464 TATCTTG-AATTTTGGCTTTCACATTTTCGATTGTATCTGATGGCTCAACTTCCAATGTA 5522 Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| ||||| || || || || || || ||||| Sbjct 5523 ATTGTTTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 5560 Score = 105 bits (116), Expect = 5e-18 Identities = 94/115 (82%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAG 29629 ||| || |||||||| | || ||||||||||||||||||||||| | |||| || || Sbjct 6557 ACGAAGTACCAAATGCAATGTCGATTCTTTTTGAATGTTATAATCGGACAAT-GTACGGC 6615 Query 29630 AATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACC 29684 ||| || | |||||| |||||| | ||||||||||||||||| || |||||||| Sbjct 6616 CATCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGCTGATCTGGTGGAATACC 6670 Score = 93.3 bits (102), Expect = 3e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| |||||||| | || ||||| |||||||| |||||||| | | || ||| Sbjct 6257 ACGCAATACCAAATGCAATGTAGATTCCTTTTGAATATTATAATCGGACAAAGTTCGACC 6316 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACC 29684 ||| || | ||||||||||||| | ||||| | ||||||||| || |||||||| Sbjct 6317 ATCTTCTAATTGTTTGCCAGCAAAGATCAAACGTTGCTGATCTGGTGGAATACC 6370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385211190570546