Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq206 114 2e-20 >seq206 Length=237414 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 168526 AAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 168585 |||| ||| ||||| || || |||| |||||||| || ||| | | ||| | ||||| Sbjct 142156 AAGAGCTTCTATGGTTTCTACAAGGATCAACTGACTCGAAAAAGCTGTCTGAAAAAGGTG 142097 Query 168586 TTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAA 168645 | ||| | ||| | | ||||| || || |||||| | ||| ||| ||| |||| Sbjct 142096 TAAAAATCTGGGATGCAAATGGATCACGAGAATTTCTCGATAGCCTTGGGTTTGCCGATC 142037 Query 168646 GAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAAT 168705 | ||||||||||| |||||||| | ||||| ||||||||||||||| || || ||| Sbjct 142036 GTCAAGAAGGTGATCTAGGTCCAGTATATGGTTTTCAATGGAGACATTTTGGTGCCGAAT 141977 Query 168706 ATATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAA 168753 || ||| || | ||||| | | ||||| || || ||||||| Sbjct 141976 ATCGAGACAAAAATTCCGATTATAATGCTCAAGGTGTTGATCAATTAA 141929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635164054837680