Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1705 140 2e-28 seq1658 140 2e-28 seq1489 140 2e-28 >seq1705 Length=717327 Score = 140 bits (154), Expect = 2e-28 Identities = 156/206 (76%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| || ||| ||||| || |||||||||||||| | || || | || |||||||| Sbjct 502860 ATGGAGGGTGGATTCTTTCTGAATGTTGTAATCGGACAAAGTACGGCCATCTTCCAATTG 502801 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 ||| |||||||||||||| || ||||||||| | || | |||||||||||| |||||| Sbjct 502800 TTTACCGGCAAAAATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGTCTTGAATTTT 502741 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 | || |||| || | ||| || || |||||| || | ||||| |||||||| | Sbjct 502740 -AGCTTTTACATTTTCAATGGTATCCGATGGTTCCACTTCCAAGGTGATTGTTTTACCAG 502682 Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750 | || |||||||| || || |||||| Sbjct 502681 TCAAAGTTTTTACGAATATTTGCATA 502656 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| || || | ||| ||||| |||||||| ||||| ||||| || Sbjct 502200 ACCACCACGTAGACGCAAGACAAGATGGAGAGTAGATTCTTTTTGGATGTTATAATCAGA 502141 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| || | || || | |||||| || ||||||||||| || ||||||||| | || Sbjct 502140 TAATGTACGGCCATCTTCAAGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCTGGTGG 502081 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || ||||| || || |||| || | ||||| || ||| | Sbjct 502080 GATACCTTCTTTATCTTGGATTTT-TGCTTTCACATTTTCAATCGTGTCCGATGGTTCGA 502022 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || ||||| ||||| ||||| ||||| || |||||| Sbjct 502021 CTTCCAATGTAATAGTCTTACCAGTTAAGGTTTTGACAAAAATTTGCATA 501972 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||||||||| | ||| |||||| |||||||| ||||||||||| Sbjct 502656 ACCACCACGAAGACGTAACACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACT 502597 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || || | || ||||| ||||| |||||||||||||| |||||||||||| | || Sbjct 502596 CAAGGTTCGGCCATCTTCCAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTGG 502537 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||| || |||||| |||| |||| || | || || || || | Sbjct 502536 GATTCCTTCTTTATCTTGAATTTTGGCTTTC-ACATTTTCGATTGTATCTGATGGCTCAA 502478 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || |||||||| || || || || || || || |||||| Sbjct 502477 CTTCCAATGTAATTGTTTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 502428 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | |||||| || | ||| || ||| |||||||| || || ||||| Sbjct 502428 ACCACCACGTAGACGTAAGACAAGATGGAGGGTGGATTCTTTTTGGATATTATAATCACT 502369 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| || | || ||||| ||||| |||||||| ||||| || ||||||||| | || Sbjct 502368 CAATGTTCGGCCATCTTCCAACTGTTTACCGGCAAAGATCAACCGTTGCTGATCTGGTGG 502309 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| |||||| |||| |||| || | ||| ||| || || | Sbjct 502308 GATACCTTCTTTGTCCTGAATTTTAGCTTTC-ACATTTTCAATGGTATCGGATGGCTCGA 502250 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || || || || ||||| ||||| || |||||| Sbjct 502249 CTTCCAATGTAATGGTCTTGCCGGTCAATGTTTTGACAAAAATTTGCATA 502200 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||||| || | ||| || ||| || ||||| |||||||||||||| Sbjct 501972 ACCACCACGAAGTCGTAATACGAGATGAAGGGTGGATTCCTTTTGGATGTTGTAATCGGA 501913 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || || | || |||||||| ||||| ||||| ||||| || ||||| ||| | || Sbjct 501912 CAAAGTTCGACCATCCTCCAATTGCTTTCCAGCAAAGATCAATCGTTGCTGGTCTGGTGG 501853 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || ||||| | || |||| || | ||||| || ||||| Sbjct 501852 GATACCTTCTTTATCTTGGATTTT-AGCTTTGACATTTTCAATAGTGTCAGATGGTTCCA 501794 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || |||||||| || || ||||| || || || ||||| Sbjct 501793 CTTCCAATGTAATGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCAT 501745 Score = 86.0 bits (94), Expect = 4e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||||| | || |||||||| ||||| |||||||| Sbjct 501444 ACCACCACGAAGACGAAGTACCAAATGCAATGTCGATTCTTTTTGAATGTTATAATCGGA 501385 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| || | || |||||||||||||| ||||| ||||| | ||||||||| | || Sbjct 501384 CAATGTACGGCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGCTGATCTGGTGG 501325 Query 33642 CACACCT 33648 | |||| Sbjct 501324 AATACCT 501318 >seq1658 Length=21299 Score = 140 bits (154), Expect = 2e-28 Identities = 156/206 (76%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| || ||| ||||| || |||||||||||||| | || || | || |||||||| Sbjct 18294 ATGGAGGGTGGATTCTTTCTGAATGTTGTAATCGGACAAAGTACGGCCATCTTCCAATTG 18235 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 ||| |||||||||||||| || ||||||||| | || | |||||||||||| |||||| Sbjct 18234 TTTACCGGCAAAAATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGTCTTGAATTTT 18175 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 | || |||| || | ||| || || |||||| || | ||||| |||||||| | Sbjct 18174 -AGCTTTTACATTTTCAATGGTATCCGATGGTTCCACTTCCAAGGTGATTGTTTTACCAG 18116 Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750 | || |||||||| || || |||||| Sbjct 18115 TCAAAGTTTTTACGAATATTTGCATA 18090 Score = 136 bits (150), Expect = 3e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||||| || | ||| || ||| |||||||| ||||||||||| || Sbjct 17404 ACCACCACGAAGCCGTAATACAAGATGAAGGGTGGATTCTTTTTGAATGTTGTAATCAGA 17345 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || || | || |||||||| ||||||||||| ||||| || ||||||||| | || Sbjct 17344 CAAAGTTCGACCATCCTCCAATTGCTTTCCGGCAAAGATCAACCGTTGCTGATCTGGTGG 17285 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| ||||| | || |||| || | ||||| || ||||| Sbjct 17284 GATACCTTCTTTGTCTTGGATTTT-AGCTTTGACATTTTCAATAGTGTCCGATGGTTCCA 17226 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || |||||||| ||||| ||||| ||||| || ||||| Sbjct 17225 CTTCCAATGTAATGGTTTTACCAGTTAAGGTTTTGACAAAAATTTGCAT 17177 Score = 114 bits (126), Expect = 8e-21 Identities = 164/230 (71%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| ||||| | ||| |||||| |||||||| ||||||||||| Sbjct 18090 ACCACCACGAAGACGCAACACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACT 18031 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || || | || ||||| ||||| |||||||||||||| |||||||||||| | || Sbjct 18030 CAAGGTTCGGCCATCTTCCAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTGG 17971 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||| || |||||| ||| |||| || | || || || || | Sbjct 17970 GATTCCTTCTTTATCTTGAATTTTGGCTTTTCACATTTTCGATTGTATCTGATGGCTCAA 17911 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || |||||||| || || || || || || || |||||| Sbjct 17910 CTTCCAATGTAATTGTTTTACCAGTCAAAGTCTTGACGAATATTTGCATA 17861 Score = 111 bits (122), Expect = 1e-19 Identities = 165/230 (72%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | |||||| || | ||| |||||| || ||||| ||||| || || || Sbjct 17632 CCACCACGTAGACGTAAGACAAGATGGAGAGTGGATTCCTTTTGGATGTTATAGTCAGAT 17573 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||| || | || || | |||||| || ||||||||||| || ||||||||| | || Sbjct 17572 AATGTACGGCCATCTTCAAGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCTGGTGGA 17513 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| ||||| || ||||| || || |||| || | ||||| || ||| || Sbjct 17512 ATACCCTCTTTATCTTGGATTTT-TGCTTTCACATTTTCAATCGTGTCCGATGGTTCGAC 17454 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCT-GCATA 33750 || | || || || ||||| ||||| ||||| |||||||| | ||||| Sbjct 17453 TTCCAGTGTAATAGTCTTACCAGTTAAGGTTTTGACAAAGATTTGGCATA 17404 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| ||||| | ||| ||||| |||||||| || || ||||| Sbjct 17861 ACCACCACGAAGACGCAACACAAGATGGAGAGTAGATTCTTTTTGGATATTATAATCACT 17802 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| | | || ||||||||||| ||||||||||||||||| || |||||| | || Sbjct 17801 CAATGTTCTGCCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGTTGATCTGGTGG 17742 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| ||||| |||| || | || | ||| || || || | Sbjct 17741 AATTCCTTCTTTGTCCTGGATTTTAGCTTTC-ACGTTTTCAATGGTATCTGATGGCTCGA 17683 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || ||||| || || || ||||| ||||| || ||||| Sbjct 17682 CTTCCAAAGTAATGGTTTTGCCGGTCAATGTTTTGACAAAAATTTGCAT 17634 Score = 87.8 bits (96), Expect = 1e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| | || |||||||| ||||| |||||||| | ||| || | || ||| Sbjct 16857 ACCAAATGCAATGTCGATTCTTTTTGAATGTTATAATCGGACAATGTACGGCCATCTTCC 16798 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCT 33648 ||||||||||| ||||| ||||| || ||||||||| | || | |||| Sbjct 16797 AATTGTTTTCCAGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCT 16750 Score = 84.2 bits (92), Expect = 1e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| || |||||||| | || |||||||| || ||||||||||| Sbjct 17175 CCACCACGTAGACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCGGAC 17116 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || || | || || |||||||| || ||||| |||||||| ||||||||| | || Sbjct 17115 AAAGTTCGACCATCTTCTAATTGTTTGCCAGCAAAGATCAAACGTTGCTGATCTGGTGGA 17056 Query 33643 ACACCT 33648 | |||| Sbjct 17055 ATACCT 17050 >seq1489 Length=23360 Score = 140 bits (154), Expect = 2e-28 Identities = 156/206 (76%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| || ||| ||||| || |||||||||||||| | || || | || |||||||| Sbjct 5129 ATGGAGGGTGGATTCTTTCTGAATGTTGTAATCGGACAAAGTACGGCCATCTTCCAATTG 5188 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 ||| |||||||||||||| || ||||||||| | || | |||||||||||| |||||| Sbjct 5189 TTTACCGGCAAAAATCAACCGTTGCTGATCTGGTGGGATACCTTCTTTGTCTTGAATTTT 5248 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 | || |||| || | ||| || || |||||| || | ||||| |||||||| | Sbjct 5249 -AGCTTTTACATTTTCAATGGTATCCGATGGTTCCACTTCCAAGGTGATTGTTTTACCAG 5307 Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750 | || |||||||| || || |||||| Sbjct 5308 TCAAAGTTTTTACGAATATTTGCATA 5333 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||||||||| | ||| |||||| |||||||| ||||||||||| Sbjct 5333 ACCACCACGAAGACGTAACACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACT 5392 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || || | || ||||| ||||| |||||||||||||| |||||||||||| | || Sbjct 5393 CAAGGTTCGGCCATCTTCCAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTGG 5452 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||| || |||||| |||| |||| || | || || || || | Sbjct 5453 GATTCCTTCTTTATCTTGAATTTTGGCTTTC-ACATTTTCGATTGTATCTGATGGCTCAA 5511 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || |||||||| || || || || || || || |||||| Sbjct 5512 CTTCCAATGTAATTGTTTTACCAGTCAAAGTCTTGACGAAAATTTGCATA 5561 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| || || | ||| ||||| |||||||| ||||| ||||| || Sbjct 5789 ACCACCACGTAGACGCAAGACAAGATGGAGAGTAGATTCTTTTTGGATGTTATAATCAGA 5848 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| || | || || | |||||| || ||||||||||| || ||||||||| | || Sbjct 5849 TAATGTACGGCCATCTTCAAGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCTGGTGG 5908 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || ||||| || || |||| || | ||||| || ||| | Sbjct 5909 GATACCTTCTTTATCTTGGATTTT-TGCTTTCACATTTTCAATCGTGTCCGATGGTTCGA 5967 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || ||||| ||||| ||||| ||||| || |||||| Sbjct 5968 CTTCCAATGTAATAGTCTTACCAGTTAAGGTTTTGACAAAAATTTGCATA 6017 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | |||||| || | ||| || ||| |||||||| || || ||||| Sbjct 5561 ACCACCACGTAGACGTAAGACAAGATGGAGGGTGGATTCTTTTTGGATATTATAATCACT 5620 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| || | || ||||| ||||| |||||||| ||||| || ||||||||| | || Sbjct 5621 CAATGTTCGGCCATCTTCCAACTGTTTACCGGCAAAGATCAACCGTTGCTGATCTGGTGG 5680 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| |||||| |||| |||| || | ||| ||| || || | Sbjct 5681 GATACCTTCTTTGTCCTGAATTTTAGCTTTC-ACATTTTCAATGGTATCGGATGGCTCGA 5739 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || || || || ||||| ||||| || |||||| Sbjct 5740 CTTCCAATGTAATGGTCTTGCCGGTCAATGTTTTGACAAAAATTTGCATA 5789 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||||| || | ||| || ||| || ||||| |||||||||||||| Sbjct 6017 ACCACCACGAAGTCGTAATACGAGATGAAGGGTGGATTCCTTTTGGATGTTGTAATCGGA 6076 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || || | || |||||||| ||||| ||||| ||||| || ||||| ||| | || Sbjct 6077 CAAAGTTCGACCATCCTCCAATTGCTTTCCAGCAAAGATCAATCGTTGCTGGTCTGGTGG 6136 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || ||||| | || |||| || | ||||| || ||||| Sbjct 6137 GATACCTTCTTTATCTTGGATTTT-AGCTTTGACATTTTCAATAGTGTCAGATGGTTCCA 6195 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || |||||||| || || ||||| || || || ||||| Sbjct 6196 CTTCCAATGTAATGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCAT 6244 Score = 86.0 bits (94), Expect = 4e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||||| | || |||||||| ||||| |||||||| Sbjct 6545 ACCACCACGAAGACGAAGTACCAAATGCAATGTCGATTCTTTTTGAATGTTATAATCGGA 6604 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| || | || |||||||||||||| ||||| ||||| | ||||||||| | || Sbjct 6605 CAATGTACGGCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGCTGATCTGGTGG 6664 Query 33642 CACACCT 33648 | |||| Sbjct 6665 AATACCT 6671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328697165627520