Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1123 735 0.0 seq1179 554 6e-153 seq1705 462 3e-125 >seq1123 Length=366939 Score = 735 bits (814), Expect = 0.0 Identities = 1239/1781 (70%), Gaps = 32/1781 (2%) Strand=Plus/Plus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 |||||||| || || | || | | ||||| |||||||| ||||||||||| | |||| Sbjct 23489 TGAAATTCTCCGGAAAGAACACGTCTTGTGTATATATTACTTGTATATGGTTCAAAAGAT 23548 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 ||||| || || |||||||| || || || || || ||||| || || || | |||||| Sbjct 23549 TCATTGTTCCCAAGAATTTGTGCTGTCGAAGCTGTAGGCATTGGAGCTACAAGCAAACTA 23608 Query 68839 TTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGAT 68898 |||| | ||||||| || ||| | |||| | || ||||||| ||||||| | | Sbjct 23609 TTTCGTATACCATGTTTTGCAATTCGAGCTTTCAAATCGTTCCAATTCCAAAGAGATGTT 23668 Query 68899 GGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATAT 68958 ||| | |||||| | || | |||||||| | ||| | | |||||| | ||| Sbjct 23669 GGTTGACGATTCCACATGTCAAACTGTAGAATACTTTTAGATACTGGTGATCCTTCATAC 23728 Query 68959 GTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAA 69018 |||||||| || || | ||||||| | |||||||||||| ||||||||||| |||||| Sbjct 23729 GTTTCATATGGACCATTTCGTTCAGCCAATTCACAACTTGCTTCTAATGCACCATAATAA 23788 Query 69019 ATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGT 69078 |||||||| ||||||| ||||||| | | |||||| ||| ||| |||||||| | Sbjct 23789 ATTGTTTCAAAAATCTGAATATTGAGCAATCGAGCTTCTTCACTTTCGTATGGATAACGC 23848 Query 69079 AAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTA 69138 | ||||| |||||||| ||||| || ||||| || ||||| || |||| ||| | | Sbjct 23849 ATTAGAATGAATGCATCGGCCAAACCTTGAACACCGATACCTATCGGTCGATGACGAAGA 23908 Query 69139 TTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTT 69198 || ||| | ||||| || | ||||||||| ||| ||| |||| ||| || ||||| Sbjct 23909 TTCGAATATCGTGCTTCCGGTACGGGATAATAAGTAACATCAATAACTTTGTTTAGATTA 23968 Query 69199 CGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATCTAT---- 69254 || || |||||||| | || | ||| ||||||| | || || | | Sbjct 23969 CGAGTGACAACTTTAACAATCGATTTCAATTTTTTAAAATCATAGATTCGATTTTTATGA 24028 Query 69255 --AACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGC---TACCTCATTAGAA 69309 |||||| | |||| || | || |||| |||||| || || | | || ||||| Sbjct 24029 TCAACAAATTTGTTCAAAGCAATCGAGGCTAAATTACAGACAGCAATTTCATCTTTAGA- 24087 Query 69310 TTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGC 69369 || ||||| | ||||| ||||| |||||| ||||||||| || || |||||||| Sbjct 24088 --TGAATATTCCACAATCTCCGTACAAAGATTAGAACATTTGATTGTACCAAGATTTTGT 24145 Query 69370 TGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATC 69429 ||||| || ||||| ||||| |||| ||| |||| || |||||||| || Sbjct 24146 TGATTTGATTTACGATTACAATGATCCTTATAAACCATATACGGTGTGCCAGTTTCGATT 24205 Query 69430 TGAGATTCGATAATAGATTTCCAAACGACCCTAGCA-TTTATTACGGTCTTGTAACGCTT 69488 || ||||| ||||| || ||||| | | |||| ||| | || || || || Sbjct 24206 TGTGATTCAATAATGGAAAACCAAAGATCACGAGCACGACATTGTGATC-GATATCGTTT 24264 Query 69489 CTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548 || |||||||| ||| ||||||| ||| ||||| || |||||| |||| ||||| Sbjct 24265 TTCATTTTCATAATGTTCATATAGCTTTTCAAATTCTTCACCCCAACAATCAAATAATCC 24324 Query 69549 AGGACATTCATTTGGACACATCAATGACCACA---CATCATCATCCTTAACTCGTTTCAT 69605 |||||| ||||| ||||||||||||||||||| |||| | |||| || |||||||| Sbjct 24325 AGGACACTCATTCGGACACATCAATGACCACATTGCATCTTGATCC---ACACGTTTCAT 24381 Query 69606 AAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCC 69665 |||| ||| ||||||||||| || ||| | ||| | | | |||||| ||| Sbjct 24382 GAATAAATCAGGAATCCAAAGGGCATAAAATAAATCACGTGCACGTAATTCTTCGGATCC 24441 Query 69666 TGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 69725 |||||||| ||||| | ||| || | ||||| |||||||||||||||||||| || Sbjct 24442 GGTATTTTTACGAAGATTTATAAAATCAAAGATATCCGAATGCCATGGTTCTAGATAGAT 24501 Query 69726 CGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATA 69785 || | |||| || ||||| || || || ||||| | |||| || || ||||| || Sbjct 24502 GGCAAATGCTCCAGGACGTTTGTTGCCACCTTGATCAACATATCGAGCCGTATTATTGTA 24561 Query 69786 GACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCC 69845 || | | ||| |||| | |||||||| ||||| || || | ||||||||| || Sbjct 24562 TACACGTAACATAGGAACCAAGCCATTAGAAAATCCATTCGTACCGGCAATATAACTACC 24621 Query 69846 TCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGC 69905 | || ||| | || | ||||| || || || || ||| || || | || Sbjct 24622 AGAAGATCGGATACAATGAACATTAAGACCAATACCGCCAGCTGATTTTGAAATAATGGC 24681 Query 69906 ACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAA 69965 |||| ||| | || ||||||||||| || || |||||||| |||| |||| ||||| Sbjct 24682 ACAATTTTTAAGGGTATCATATATACCTTCAATACTATCATCACTCATAGTAAGCAGAAA 24741 Query 69966 ACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGT 70025 ||| || | ||| | || | || || |||||||| |||||||| ||||| || || Sbjct 24742 ACATGATGATAATTGTGGCCGTTTTGTGCCGGCATTAAACAATGTAGGTGATGCATGTGT 24801 Query 70026 GAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGAT 70084 ||||| ||||| || | | ||| || |||||||| || | || ||||| ||| || Sbjct 24802 AAACCAATTTTCCGAGATTAAATTATACGTTTCAATGGCGGCATCGATATCATCAC-CAT 24860 Query 70085 GAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTA 70144 |||| || || || ||||||||||||||| || |||||||| || || | | Sbjct 24861 GAATACCAATAGCACAACGCATCAACATATGTTGGGGTCGTTCGACAACCTTGTCGCAAA 24920 Query 70145 TTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTC 70204 |||| | || || | | | ||||| || |||||||| ||||| ||| || | Sbjct 24921 TTTTGAGCAAATAACTTCGATATAATGTTTTGAAACCAAAATAATTGTAATTAAAATCAC 24980 Query 70205 TTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATA--TCCATAAC 70262 || || || || ||||||| | || | | | |||| | |||| | ||||| Sbjct 24981 GATCATAGATTATGGCAGAATTAA---TACGTTCAGAATTGGCCATTATAATTTCATAAA 25037 Query 70263 AGTAGGT-GAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTG--AATAA 70319 | | || ||||| |||| ||| |||| | | ||| || |||| |||| Sbjct 25038 TTTCTTTCGATATAATTGGAGTGGGTTGACCAGTATGTTCATT--GATCGTTGTATATAA 25095 Query 70320 ATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTAT 70379 ||| | || ||||| || ||| |||||||| || |||||||||||||| ||||| Sbjct 25096 ATCATGAATAACATCGGAGAAATTTTTCTTTGTTTCTTTATGTAAATTTGATATAGCTAT 25155 Query 70380 TCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGC 70439 || || || ||||| ||||| ||| ||||| || || | || ||||| ||||| || Sbjct 25156 TCGAGCGGCAAGAATGGCATAATCAATATGTTCAGTGGTCAATGTGGCTGCAATTTCTGC 25215 Query 70440 AGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATA 70480 ||||| ||| |||||| | |||||||| || ||||| Sbjct 25216 TGCTAATTCATCCAATTCTTTTGTTGTAACACCAGAATATA 25256 Score = 109 bits (120), Expect = 8e-19 Identities = 159/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 68365 TTATCCAATGTAAACTGAATGGG-TGAGGATGCGGGTTTTGTACGTAGATAGTACATACC 68423 ||||||| ||||| || || | || | | || ||||| ||||||| ||| ||||| || Sbjct 23073 TTATCCACCGTAAATTGTATAGCCTGTGCA-GCCGGTTTCGTACGTAAATAATACATTCC 23131 Query 68424 GGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGG 68483 |||||||| ||| || ||| || | |||||||| ||| | ||| | | | |||| Sbjct 23132 GGTTTTCAATCCTGAACGCCAACCAAAAAAATGCATTGATGTCAATTTCGTAATATTTGG 23191 Query 68484 ATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGC 68543 ||||| | |||||| || | |||||||||||||| ||| | || || | ||| | || Sbjct 23192 CTCGGCAAAATGAATGTTTAATGATTGACTTTGATCAATGTATGCACCACGATCAACAGC 23251 Query 68544 CATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTT 68585 ||| | | ||| | || || | |||||||||| ||| || Sbjct 23252 CATCTGGACAATTGTTTTCTGTGATATTTCCCAAACAGTTTT 23293 >seq1179 Length=350002 Score = 554 bits (614), Expect = 6e-153 Identities = 1108/1630 (68%), Gaps = 19/1630 (1%) Strand=Plus/Minus Query 68365 TTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCG 68424 ||||||| |||||| || || | | | ||| |||||||| |||| ||| ||||| || Sbjct 63288 TTATCCACTGTAAATTGTATAGCTTGTGCTGCCGGTTTTGTTCGTAAATAATACATTCCT 63229 Query 68425 GTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGA 68484 ||||||| || || |||||| ||||||||||| || | ||| | | | ||| Sbjct 63228 GTTTTCAATCCATTACGCCATCCATAGAAATGCATCGAAGTAATTTTTGCTTTAGATGGT 63169 Query 68485 TCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCC 68544 || || ||||||| ||| | |||||||||||||| || || || || | ||| ||| Sbjct 63168 TCAGCCATATGAACATTGAGTGATTGACTTTGATCAATAAATGCACCACGATCAATGGCC 63109 Query 68545 ATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCA 68604 || | | ||||| || || || |||||||| | |||||| | | | ||| |||||| Sbjct 63108 ATATCAACAATACATTTCTGTGGTATTTCCCATACAGTCTTGTATAACGCTTTAATATCA 63049 Query 68605 TCTGGAA--GGCTCG-TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATC 68661 || || | | ||| |||| || || || |||| || | || || || | || | Sbjct 63048 TCCGGTATTGAATCGATATTCTGTATTGAACCACGATTAGCAATGATAATGGTTTTCAAT 62989 Query 68662 TCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGA 68721 || ||| |||| | | ||||| | | || | ||| ||||||| | | | Sbjct 62988 TCTTCACTCCAAAGGCCAAGATTGATTAAATCAGTGAGCAAATGTTGATTAACAACATCA 62929 Query 68722 AATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCA 68781 || ||||| | || | | ||||||||| || ||||||||||| | |||||| Sbjct 62928 AAACTACCAGACATTACACGTCTAGTGTAAATGTTTGATGTATATGGTTCAAATGATTCA 62869 Query 68782 TTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTT 68841 ||||| || | |||||| || || ||||| |||||||| ||||| || | |||||||||| Sbjct 62868 TTATTGCCTAAAATTTGTGCTGTAGATGCTGTTGGCATTGGTGCAACAAGTAAACTATTT 62809 Query 68842 CTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGT 68901 | | ||||| | ||||| |||| | | ||||||||||||||||||| |||| Sbjct 62808 CGTATACCATTTTGAGCAATTTTTGCTTTCAATTCATTCCAATCCCAAAGATCAGTTGGT 62749 Query 68902 ACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTT 68961 ||||| | ||| ||||||||||| || || | | |||||| | ||||||| Sbjct 62748 GTGCGGTTCCACATATCATATTGTAGAATACCTTTCGATACTGGTGATCCTTCATATGTT 62689 Query 68962 TCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATT 69021 ||||| || || | |||||| | |||||||||||| || |||||||| ||||||||| Sbjct 62688 TCATATGGGCCAAATTTTTCAGCCAATTCACAACTTGCTTCCAATGCACCATAATAAATT 62629 Query 69022 GTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAA 69081 ||||| || || | |||| | | || ||||| ||||| || |||||||| | | Sbjct 62628 GTTTCAAATATTTGAATATTCATTTGTTTAGCTTCGAGACTTTCATATGGATAACGCATT 62569 Query 69082 AGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTT 69141 | | |||||||| || || || || || ||||| || || |||| ||| | ||| Sbjct 62568 AAGTTGAATGCATCGGCTAAACCTTGTACACCAATTCCAATCGGTCGATGACGTAGATTC 62509 Query 69142 GAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGG 69201 |||| || ||||| || | |||||| ||||| |||| |||||||| || | |||| Sbjct 62508 GAACGTTTCGCTTCCGGTAATGGATAAAAATTACTATCGATAATTTTGTTCAAATTTTTT 62449 Query 69202 ACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGT--CCATCTAT----- 69254 | ||||||||| | || || ||||| | |||||||| || | || | Sbjct 62448 GTCATTACTTTAACAATTTCTTTGAGTTTATCATAATCAAAT-GTAAAAAGCTTTGGATC 62390 Query 69255 AACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGC 69314 ||||| || || | || || | ||||||||| || | |||| || || Sbjct 62389 GACAAAACGTGGCAATGAAATTGAAGCCAAATTACAAACGGCAATTTCATCAGCTGATGA 62330 Query 69315 ATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATT 69374 ||||| | || || ||||| ||||| ||||||||| || |||| |||||| ||||| Sbjct 62329 ATATTCAACAATTTCCGTACAAAGATTTGAACATTTGATGGTTCCCAAATTTTGTTGATT 62270 Query 69375 ACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGA 69434 || ||||| || || || | || | ||||||||||||||||| || | Sbjct 62269 TGATTTACGATTACAATGATCTTTATATACCATGTATGGAGTACCAGTTTCAATTTGTGC 62210 Query 69435 TTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACG--CTTCTCT 69492 || | ||| | ||| | | || || | | | | ||||| |||| | Sbjct 62209 ATCCAAAATGGCAAACCATAAATCATGTGCTTTCACTTGTGACCGATAACGACCTTCAC- 62151 Query 69493 TTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGA 69552 ||||||||| ||||||| ||||||||| || |||||| |||| | ||| ||| Sbjct 62150 -GCTCATATTGTTCATATAGCTTTTCGAATTCTTCACCCCAACATTCATGAAGTCCGGGA 62092 Query 69553 CATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGA 69612 |||||||||||||||||||||||||||| | |||| | ||| ||||||||||| | | Sbjct 62091 CATTCATTTGGACACATCAATGACCACATACCATCCATTTCAACACGTTTCATAAACAAA 62032 Query 69613 TCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAtt 69671 || || ||||| | || ||| || || || | | | ||||| || ||||| Sbjct 62031 TCCGGTATCCACAATGC-ATAGAATAGGTCACGTGCACGTAGCTCTTCGGAACCAGTATT 61973 Query 69672 ttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCAT 69731 ||||| ||||| | ||| | | |||||| | ||||||||| || | ||| || || | Sbjct 61972 CTTTTTTAGATCCAAAAAGGCAAAAATATCTGCATGCCATGGCTCCAAATAGATAGCAAA 61913 Query 69732 GACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCT 69791 | || || ||||| || || ||||| | || | ||||||||||| | || | Sbjct 61912 TGCACCTGGACGTTTTCCACCACCTTGATCCACATAACGTGCAGTGTTATTGAATACACG 61853 Query 69792 CAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGC 69851 | ||| || | | |||||| || |||||| || |||| |||||| || || Sbjct 61852 TAACATTGGTACTAAACCATTGGAAAAACCATTCGTACCAGCAATATATGAACCATGTGA 61793 Query 69852 GCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACG 69911 |||||| | || | || || || || || || ||| || || | ||||| | Sbjct 61792 ACGAATACAATGAACATTAAGGCCAATACCACCGGCAGATTTCGAAATAATTGCACATTG 61733 Query 69912 TTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCA-TGTTAAGAAGAAAACAGC 69970 ||||||||| ||||| || || || ||||||||||| || ||| || |||||| || Sbjct 61732 TTTCAATGTATCATAGATGCCTTCAATGCTATCATCGCCCATTGTCAATAAGAAACAAGA 61673 Query 69971 TAGACATTTG 69980 | |||||||| Sbjct 61672 T-GACATTTG 61664 Score = 145 bits (160), Expect = 1e-29 Identities = 319/474 (67%), Gaps = 8/474 (2%) Strand=Plus/Minus Query 69999 ATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTC 70058 ||| || |||||||| ||||| || || |||||| ||| || | ||||| |||||||| Sbjct 61565 ATTGAACAATGTAGGTGATGCATGTGTAAACCATCCTTCGGACATAAGATTATATGTTTC 61506 Query 70059 AATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTG 70118 || |||| || ||||| | |||||| || | || ||||||||||||||||| || Sbjct 61505 GATTGCTGCATCAATATCATCTTTATGAATACCAACGGCAACACGCATCAACATATGTTG 61446 Query 70119 AGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAA 70178 || ||||| || | ||| | | |||||||||| || || | || ||||| || Sbjct 61445 TGGACGTTCAACAGCTTTTTGACCAATTTTCAACAAATACGAACGATACAATGTTTTGAA 61386 Query 70179 CCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTT 70238 |||||||| ||| || | | |||| || ||||| || | ||||||| | ||| Sbjct 61385 ACCAAAATAATTGAATCGATAATCTCGATCATAAATGATCGCTGAATTTAATCGTTCC-- 61328 Query 70239 ATATTTGG---TAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCA-T 70294 | |||| ||| || || |||| | | || | || | |||| ||| | Sbjct 61327 -GAATTGGCCATAATAATTTCATAAACATCATCGGCAATCAATGGCATTGGTTTGCCAGT 61269 Query 70295 TTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTT 70354 |||| | ||| | | | ||||| | | ||||| ||| ||| ||||||| Sbjct 61268 TTTTTCACTCTTCATCG-TATACAAATCATGTACGACATCGGAAAAATTTTTCTTTGTTT 61210 Query 70355 CCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTG 70414 | || ||||||||||| |||| || || || || || ||||||| ||| ||||| || Sbjct 61209 CTTTTTGTAAATTTGAAATGGAAATCCTTGCGGCCAGTTTAGCATAATCAACATGTTTTG 61150 Query 70415 TAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAA 70468 | || || || || ||||| ||||| || ||| |||| | ||| |||| Sbjct 61149 TGGTCATTGTTGCCGCAATTTCGGCAGCCAATTCATCCAATTGAACAGTGGTAA 61096 >seq1705 Length=717327 Score = 462 bits (512), Expect = 3e-125 Identities = 690/964 (72%), Gaps = 40/964 (4%) Strand=Plus/Plus Query 39271 TTAAAAGTCAACATCTA-AAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 39326 |||||| ||| ||||| || ||| || | |||||| | |||||| || || ||| Sbjct 625389 TTAAAAATCAGCATCTGTAACAAATATC-TGATCTTCAGGCCGTGACATGACACCACTTT 625447 Query 39327 TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386 |||| ||||| |||| ||||| ||||||||||| | ||| ||||||||||| || | || Sbjct 625448 TTTGATATTCGGCAACACGTTTTTCGAAAAAATTTGATTTACCTTCCAATGAAATTTGTT 625507 Query 39387 CCATGAAATCAAACGGATTAGTTGCATTATAtttttttttA-AATCCTAATTCTGAAATC 39445 |||| || ||||| ||||| | | ||||| | ||||| | ||| | |||||| | Sbjct 625508 CCATAAATTCAAATGGATTGGCCGTTTTATAATGTTTTTCACAATTC-AATTCTACCAAT 625566 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 || | ||||||| | |||| || || ||| | || ||||||| || || | | Sbjct 625567 AAACGATCTGCACAATATTCAATATAATCGGACATTAATTTTGAATTCATGCCAATCAAT 625626 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565 |||||||| || || || | || || | ||| || ||| || ||| Sbjct 625627 GAAACTGGTAATGCATCGGTCAAGAATTCCTGTTCAATCGATACAGC----------ATC 625676 Query 39566 GATGTTACTACCTCATCACT-CGGTG----GATGCA--ATAA-----ATGTTTAAACATT 39613 ||| || || ||| || | || || |||| | || | ||| | ||||| | Sbjct 625677 GATAATAATA--TCAACAATTCGTTGTGGTGATGGACGATTACGAATATGGTGAAACAAT 625734 Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 ||||| || || |||||||||| || ||||| | ||| ||||| || |||||||| Sbjct 625735 AAGCATGCAAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATTCGAAAATGTA 625794 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAG 39733 || |||||||| || ||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 625795 AGACCAGGCATGAGGCCACGTTTTTTAAGCCAAAAAATTGCGGCAAATGAACCAGAAAAA 625854 Query 39734 AAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCG----TAACTTGTATCATT 39789 ||||| ||||| || ||||||||||||| | | || || ||||| | ||||| Sbjct 625855 AAGATTCCTTCAACGGCTGCAAATGCAATCAAACGTTCAGCGAATGTAACT-GAATCATC 625913 Query 39790 ATGTATCCA-CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAG 39848 || |||| | | | ||||| | |||||| || | ||||||||| | | ||| | Sbjct 625914 CTGGGTCCAACGTATA-GCCCATTTAGCTTTTTTTTCTACACAAGGTAAATTACGTATGG 625972 Query 39849 CATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTAT 39908 |||| || ||| ||| || |||| || ||| |||||||||| || || | || Sbjct 625973 CATTGAATAGAAAATCTTGTTCACTACGATCCGATACATATGTATTGATCAATAATGAAT 626032 Query 39909 ACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAG 39968 ||||||||||||| | |||||||| || || ||||| || |||||||| | |||||| | Sbjct 626033 ACATTTCTGAATGAACATTTTCAATGGCAATTTGAAAGCCATAAAAACAACGTGCTTCTG 626092 Query 39969 TAATTTGTACCTC-TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTA 40027 |||||||| || ||| |||| | ||| |||| ||||||||| || || ||||| || Sbjct 626093 GTATTTGTACATCACGAATAAAA-CGTTCGGCCAGATTTTCATTGACAATACCATCGCTT 626151 Query 40028 GCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTC 40087 || ||||||||||||||||||||| |||| |||| |||||||| | |||||| |||| Sbjct 626152 GCAGCAAAAAATGCCAATACATGTGTAATGAAATGTTTTTCATTTGCATTCAATTGATTC 626211 Query 40088 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCC 40147 || | ||||| || ||| ||||||||| ||||||| || || || || || Sbjct 626212 CAATGGGCAATATCACGACTTAGATCCACTTCTTCAACTGTCCAGAATGATGCTTCAGCT 626271 Query 40148 TTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGA 40207 ||||| |||||| |||| || ||| ||||||| |||||||| | |||||| | ||||||| Sbjct 626272 TTTTTATACATGATCCAAATGTCATGATATTGAATTGGAAACAAAACAAAACGATTTGGA 626331 Query 40208 TTTT 40211 |||| Sbjct 626332 TTTT 626335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686894151669840