Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1705 96.9 4e-15 >seq1705 Length=717327 Score = 96.9 bits (106), Expect = 4e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 59971 CATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGT 60030 |||| || ||||| | || || |||||| ||| ||||||||||| || ||||| || | Sbjct 625900 CATTCGCTGAACGTTTGATTGCATTTGCAGCCGTTGAAGGAATCTTTTTTTCTGGTTCAT 625841 Query 60031 TCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACG 60090 | || ||||| ||||| ||||| |||||||||||||| || || | || || || | Sbjct 625840 TTGCCGCAATTTTTTGGCTTAAAAAACGTGGCCTCATGCCTGGTCTTACATTTTCGAATG 625781 Query 60091 AGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCA 60131 | ||||||| || || || || | ||| || |||||| Sbjct 625780 AATTGATTTCACGTGATGAAGGATTACATTGTGATTTTGCA 625740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548513102708640