Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq745 86.0 8e-12 >seq745 Length=126491 Score = 86.0 bits (94), Expect = 8e-12 Identities = 207/312 (66%), Gaps = 1/312 (0%) Strand=Plus/Minus Query 32649 TATGAAATCAGAATAGCCAGAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATAT 32708 ||| |||| ||| | |||| || | |||| |||||||| || |||| || |||| Sbjct 76364 TATCAAATTAGATT-GCCATTGCAATTTGGTGGTATTTTATATCGAAAGCAATCGAATTG 76306 Query 32709 CTAGATACTATTTTCTTCATAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTA 32768 | ||||| | || | ||||| | | ||| || || ||| ||||| || | Sbjct 76305 ATCGATACATTATTAATAATAATCAAACGCAAAGCCAATCAGCTTACATTTTTACATATC 76246 Query 32769 TACCACCATTTTACCATGTTTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGA 32828 || || |||| || ||||||| | | | ||| | || |||| | | || ||| Sbjct 76245 TATCATCATTCAACAATGTTTATTGTTTGGTGGGTCGGTGCAAAATTTGTGCCCGGTGGA 76186 Query 32829 CAGGCATTTTTTGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTATTAC 32888 ||| || || ||| | |||| | || ||||||| | |||||||| ||||| Sbjct 76185 TCAGCAGTTACCGGTGCATTAGTCAATTGTATTGTACATGTACTTATGTATAGCTATTAT 76126 Query 32889 GGATTAACAGCAATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAAAAATATTTAACT 32948 | ||| || || | |||| |||| |||| ||||||||||||||||||| || Sbjct 76125 GCCTTAGCATCATTCGGTCAACGTTTGCAGCCATATTTATGGTGGAAAAAATATTTGACA 76066 Query 32949 ATCATACAATTG 32960 |||||||||||| Sbjct 76065 ATCATACAATTG 76054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603167937169440