Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1658 165 2e-35 seq1705 156 9e-33 seq1489 156 9e-33 seq1399 111 3e-19 seq843 91.5 3e-13 seq33 89.7 1e-12 >seq1658 Length=21299 Score = 165 bits (182), Expect = 2e-35 Identities = 171/224 (76%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || | || ||||| | ||| ||| ||||||||||| ||||||| Sbjct 17632 CCACCACGTAGACGTAAGACAAGATGGAGAGTGGATTCCTTTTGGATGTTATAGTCAGAT 17573 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | || |||||||| || |||||||| || ||||| ||||| ||||| || || ||| Sbjct 17572 AATGTACGGCCATCTTCAAGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCTGGTGGA 17513 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||| || |||||||| |||||||| || | || || |||||||| | ||||||| Sbjct 17512 ATACCCTCTTTATCTTGGATTTTTGCTTTCACATTTTCAATCGTGTCCGATGGTTCGACT 17453 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTG 283096 || || || || |||||||| || || || || || || || || Sbjct 17452 TCCAGTGTAATAGTCTTACCAGTTAAGGTTTTGACAAAGATTTG 17409 Score = 161 bits (178), Expect = 2e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | ||| ||||| | ||| ||||||||| |||||||| |||| Sbjct 17404 ACCACCACGAAGCCGTAATACAAGATGAAGGGTGGATTCTTTTTGAATGTTGTAATCAGA 17345 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || || |||||||| | ||| || |||||||||||||| ||||| || || || Sbjct 17344 CAAAGTTCGACCATCCTCCAATTGCTTTCCGGCAAAGATCAACCGTTGCTGATCTGGTGG 17285 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| || ||||||||||| || ||||| || | || ||||||||||| | ||| || Sbjct 17284 GATACCTTCTTTGTCTTGGATTTTAGCTTTGACATTTTCAATAGTGTCCGATGGTTCCAC 17225 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||| | || || || ||||| || || || || || || || |||||| Sbjct 17224 TTCCAATGTAATGGTTTTACCAGTTAAGGTTTTGACAAAAATTTGCATT 17176 Score = 143 bits (158), Expect = 6e-29 Identities = 172/230 (75%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCA-G 282930 ||||||||| || || | || ||||| | ||| |||||||||||||||||| ||| Sbjct 18090 ACCACCACGAAGACGCAACACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACT 18031 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || |||||||| || | ||||| |||||||| ||||| || || || || | Sbjct 18030 CAAG-GTTCGGCCATCTTCCAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTG 17972 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCG 283049 | || || || || ||||| || || |||||| || | ||||| || || || | || Sbjct 17971 GGATTCCTTCTTTATCTTGAATTTTGGCTTTTCACATTTTCGATTGTATCTGATGGCTCA 17912 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| | || || || ||||| ||||||||||| |||||||| ||||| Sbjct 17911 ACTTCCAATGTAATTGTTTTACCAGTCAAAGTCTTGACGAATATTTGCAT 17862 Score = 136 bits (150), Expect = 8e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | || ||||| | || |||||||||||| || || ||| Sbjct 17861 ACCACCACGAAGACGCAACACAAGATGGAGAGTAGATTCTTTTTGGATATTATAATCACT 17802 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || | |||||| || | |||||| |||||||| |||||||||||||| || || Sbjct 17801 CAATGTTCTGCCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGTTGATCTGGTGG 17742 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || || ||||| ||||| || ||||| ||| | || || || || || | ||||| Sbjct 17741 AATTCCTTCTTTGTCCTGGATTTTAGCTTTCACGTTTTCAATGGTATCTGATGGCTCGAC 17682 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||| || || || || ||||| || || || || || ||||| Sbjct 17681 TTCCAAAGTAATGGTTTTGCCGGTCAATGTTTTGACAAAAATTTGCAT 17634 Score = 93.3 bits (102), Expect = 9e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || |||||||||| ||| || || ||||||||| ||||| || || | Sbjct 16876 ACCTCCACGAAGACGAAGTACCAAATGCAATGTCGATTCTTTTTGAATGTTATAATCGGA 16817 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || |||||||| || | |||||| || ||||||||||| ||||| || || || Sbjct 16816 CAATGTACGGCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCGTTGCTGATCTGGTGG 16757 Query 282992 AATACC 282997 |||||| Sbjct 16756 AATACC 16751 Score = 91.5 bits (100), Expect = 3e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || | ||||| ||| || || ||||||||| || ||||| || | Sbjct 17175 CCACCACGTAGACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCGGAC 17116 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | || || ||||| |||| |||||| || ||||||||||||||||| || || ||| Sbjct 17115 AAAGTTCGACCATCTTCTAATTGTTTGCCAGCAAAGATCAAACGTTGCTGATCTGGTGGA 17056 Query 282993 ATACC 282997 ||||| Sbjct 17055 ATACC 17051 >seq1705 Length=717327 Score = 156 bits (172), Expect = 9e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | ||| ||||| | ||| ||| |||||||||||||| || | Sbjct 501972 ACCACCACGAAGTCGTAATACGAGATGAAGGGTGGATTCCTTTTGGATGTTGTAATCGGA 501913 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || || |||||||| | ||| || || ||||||||||| ||||| ||||| || Sbjct 501912 CAAAGTTCGACCATCCTCCAATTGCTTTCCAGCAAAGATCAATCGTTGCTGGTCTGGTGG 501853 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| || || |||||||| || ||||| || | || |||||||| || | ||| || Sbjct 501852 GATACCTTCTTTATCTTGGATTTTAGCTTTGACATTTTCAATAGTGTCAGATGGTTCCAC 501793 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||| | || || || ||||| ||||| || || ||||| || |||||| Sbjct 501792 TTCCAATGTAATGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCATT 501744 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | || ||||| | || ||||||||||||||| || |||| Sbjct 502200 ACCACCACGTAGACGCAAGACAAGATGGAGAGTAGATTCTTTTTGGATGTTATAATCAGA 502141 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || |||||||| || |||||||| || ||||| ||||| ||||| || || || Sbjct 502140 TAATGTACGGCCATCTTCAAGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCTGGTGG 502081 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| || || |||||||| |||||||| || | || || |||||||| | |||||| Sbjct 502080 GATACCTTCTTTATCTTGGATTTTTGCTTTCACATTTTCAATCGTGTCCGATGGTTCGAC 502021 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || |||||||| || || || || || || || ||||| Sbjct 502020 TTCCAATGTAATAGTCTTACCAGTTAAGGTTTTGACAAAAATTTGCAT 501973 Score = 140 bits (154), Expect = 7e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||||||||| || || | || ||||| | ||| |||||||||||||||||| ||| Sbjct 502656 ACCACCACGAAGACGTAACACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACT 502597 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || |||||||| || | ||||| |||||||| ||||| || || || || | Sbjct 502596 CAAG-GTTCGGCCATCTTCCAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTG 502538 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || || || || ||||| || || ||||| || | ||||| || || || | || | Sbjct 502537 GGATTCCTTCTTTATCTTGAATTTTGGCTTTCACATTTTCGATTGTATCTGATGGCTCAA 502478 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| | || || || ||||| ||||||||||| ||||| || ||||| Sbjct 502477 CTTCCAATGTAATTGTTTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 502429 Score = 127 bits (140), Expect = 4e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | || ||||| | ||| |||||||||||| || || ||| Sbjct 502428 ACCACCACGTAGACGTAAGACAAGATGGAGGGTGGATTCTTTTTGGATATTATAATCACT 502369 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || |||||||| || | ||||| |||||||||||||| ||||| || || || Sbjct 502368 CAATGTTCGGCCATCTTCCAACTGTTTACCGGCAAAGATCAACCGTTGCTGATCTGGTGG 502309 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| || ||||| || || || ||||| || | || || || || || | ||||| Sbjct 502308 GATACCTTCTTTGTCCTGAATTTTAGCTTTCACATTTTCAATGGTATCGGATGGCTCGAC 502249 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || ||||| || ||||| || || || || || ||||| Sbjct 502248 TTCCAATGTAATGGTCTTGCCGGTCAATGTTTTGACAAAAATTTGCAT 502201 Score = 93.3 bits (102), Expect = 9e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || |||||||||| ||| || || ||||||||| ||||| || || | Sbjct 501444 ACCACCACGAAGACGAAGTACCAAATGCAATGTCGATTCTTTTTGAATGTTATAATCGGA 501385 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || |||||||| || | |||||| || ||||||||||| | ||| || || || Sbjct 501384 CAATGTACGGCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGCTGATCTGGTGG 501325 Query 282992 AATACC 282997 |||||| Sbjct 501324 AATACC 501319 >seq1489 Length=23360 Score = 156 bits (172), Expect = 9e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | ||| ||||| | ||| ||| |||||||||||||| || | Sbjct 6017 ACCACCACGAAGTCGTAATACGAGATGAAGGGTGGATTCCTTTTGGATGTTGTAATCGGA 6076 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || || |||||||| | ||| || || ||||||||||| ||||| ||||| || Sbjct 6077 CAAAGTTCGACCATCCTCCAATTGCTTTCCAGCAAAGATCAATCGTTGCTGGTCTGGTGG 6136 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| || || |||||||| || ||||| || | || |||||||| || | ||| || Sbjct 6137 GATACCTTCTTTATCTTGGATTTTAGCTTTGACATTTTCAATAGTGTCAGATGGTTCCAC 6196 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||| | || || || ||||| ||||| || || ||||| || |||||| Sbjct 6197 TTCCAATGTAATGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCATT 6245 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | || ||||| | || ||||||||||||||| || |||| Sbjct 5789 ACCACCACGTAGACGCAAGACAAGATGGAGAGTAGATTCTTTTTGGATGTTATAATCAGA 5848 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || |||||||| || |||||||| || ||||| ||||| ||||| || || || Sbjct 5849 TAATGTACGGCCATCTTCAAGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCTGGTGG 5908 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| || || |||||||| |||||||| || | || || |||||||| | |||||| Sbjct 5909 GATACCTTCTTTATCTTGGATTTTTGCTTTCACATTTTCAATCGTGTCCGATGGTTCGAC 5968 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || |||||||| || || || || || || || ||||| Sbjct 5969 TTCCAATGTAATAGTCTTACCAGTTAAGGTTTTGACAAAAATTTGCAT 6016 Score = 140 bits (154), Expect = 7e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCA-G 282930 ||||||||| || || | || ||||| | ||| |||||||||||||||||| ||| Sbjct 5333 ACCACCACGAAGACGTAACACAAGATGGAGAGTGGATTCTTTTTGGATGTTGTAATCACT 5392 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || |||||||| || | ||||| |||||||| ||||| || || || || | Sbjct 5393 CAAG-GTTCGGCCATCTTCCAACTGTTTACCGGCAAAAATCAATCGCTGCTGATCTGGTG 5451 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || || || || ||||| || || ||||| || | ||||| || || || | || | Sbjct 5452 GGATTCCTTCTTTATCTTGAATTTTGGCTTTCACATTTTCGATTGTATCTGATGGCTCAA 5511 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| | || || || ||||| ||||||||||| ||||| || ||||| Sbjct 5512 CTTCCAATGTAATTGTTTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 5560 Score = 127 bits (140), Expect = 4e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | || ||||| | ||| |||||||||||| || || ||| Sbjct 5561 ACCACCACGTAGACGTAAGACAAGATGGAGGGTGGATTCTTTTTGGATATTATAATCACT 5620 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || |||||||| || | ||||| |||||||||||||| ||||| || || || Sbjct 5621 CAATGTTCGGCCATCTTCCAACTGTTTACCGGCAAAGATCAACCGTTGCTGATCTGGTGG 5680 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| || ||||| || || || ||||| || | || || || || || | ||||| Sbjct 5681 GATACCTTCTTTGTCCTGAATTTTAGCTTTCACATTTTCAATGGTATCGGATGGCTCGAC 5740 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || ||||| || ||||| || || || || || ||||| Sbjct 5741 TTCCAATGTAATGGTCTTGCCGGTCAATGTTTTGACAAAAATTTGCAT 5788 Score = 93.3 bits (102), Expect = 9e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || |||||||||| ||| || || ||||||||| ||||| || || | Sbjct 6545 ACCACCACGAAGACGAAGTACCAAATGCAATGTCGATTCTTTTTGAATGTTATAATCGGA 6604 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || |||||||| || | |||||| || ||||||||||| | ||| || || || Sbjct 6605 CAATGTACGGCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGCTGATCTGGTGG 6664 Query 282992 AATACC 282997 |||||| Sbjct 6665 AATACC 6670 >seq1399 Length=306096 Score = 111 bits (122), Expect = 3e-19 Identities = 253/372 (68%), Gaps = 14/372 (4%) Strand=Plus/Plus Query 43993 ACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGACTCCGTTTTAT 44052 || || || ||||| || || || || || | |||||| |||| || || || ||| Sbjct 139326 ACTTCAGAATTGTATGGCAAAGTACAAGAAGTGCCTCAACGTGAAACAACACCATTCTAT 139385 Query 44053 CCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGGATTTGTAAAAATTATCGC 44112 || || ||||| |||||||| || || || ||||||||| | |||||||| Sbjct 139386 CCACGATCACCATACGGTGTGGCAAAATCATTCGCTTATTGGATTGTTGTCAATTATCGT 139445 Query 44113 GAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAATCACGAAAGTCC-CAACAG 44171 || | |||| ||||| | ||| || ||||||||| ||| || | || | Sbjct 139446 GAAGCTTATGAAATGTTTGCCGTCAATGGTATACTTTTCAATCATGAATCACCTCGAC-G 139504 Query 44172 AGGTCATCAGTTCGTGACTCGTAAAATCACGAAAGCGGT--TGCGAATATTTTC---AAC 44226 ||| | || || ||||||||||| || | ||||| |||||| ||| || ||| Sbjct 139505 CGGTGAAACATTTGTCACTCGTAAAATTAC--ACGCGGTGTTGCGAAAATTCTCCTAAAC 139562 Query 44227 GGGACAGAAAA-ATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGGGATATGC 44285 || |||| | || || || | || || | || || |||||||||||||| | || Sbjct 139563 CGGCAAGAATATAT---TGAAT-TGGGTAATCTGGATTCAAAAAGAGATTGGGGCCACGC 139618 Query 44286 CTTGGATTATGTAGAAGCCATGTGGCTGATGTTGCAACAAGACAGGTCAGACGACTACGT 44345 |||||||| ||||| |||||||| ||||| ||||| || | |||| || | || Sbjct 139619 ACGTGATTATGTGGAAGCAATGTGGCTAATGTTACAACAGGAAAATCCAGAAGATTTTGT 139678 Query 44346 TATTGCAACTGG 44357 ||| |||||||| Sbjct 139679 TATCGCAACTGG 139690 >seq843 Length=119161 Score = 91.5 bits (100), Expect = 3e-13 Identities = 386/601 (64%), Gaps = 14/601 (2%) Strand=Plus/Plus Query 273511 TACCTTTGAAACCTTTGTACCACGGCTTCATGGCTACCATAGGTTCACCCTTC---ATCA 273567 ||||| ||||| |||| ||||| || ||||| | ||| |||||| | || | || Sbjct 22664 TACCTCTGAAATCTTTATACCATGGATTCAT---TTCCAAAGGTTCTTCATTACGAAGCA 22720 Query 273568 GTCGCTCCACATTACCAATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGACCAAC 273627 ||| | | ||| ||| |||| || || | ||| | ||||| || ||| ||||| Sbjct 22721 TTCGTTTAATGTTATCAACAATAGCTCGTGGATCATAATTAGGAACCTTGGTACTCCAAC 22780 Query 273628 CGGTGCCAATACCGGAAGAACCATTCACCAGAATACTCGGGATAATTGGGACATAATATT 273687 ||||||||||||| | |||||| || | || | || || ||||| ||||| |||| Sbjct 22781 CGGTGCCAATACCTTCTGCACCATTGACTAAAACCATTGGAATGATTGGAACATAGTATT 22840 Query 273688 CGGGCTCAATTTTATCACCATCGTCGTAAAGGTACTTCAACAAAGCATCATCCGTATCAA 273747 | || |||||| | | ||| || || |||| ||| || | ||||||| || Sbjct 22841 CAGGTTCAATTCTTAGATTATCATCATACTGGTAAGCCAATAATGGATCATCC-AATGGT 22899 Query 273748 CGAAA-ACCTTTCGCGTCTGAGGATTCAGTTTCGTGAAAATGTACCTGGCACTCGCATGG 273806 |||| | || | | | ||| | | |||||||| || | | ||| ||| Sbjct 22900 GGAAATAATTTCCTTGCCAATGGACTTAAACATGTGAAAATATAACGAGGACTAGCAGCA 22959 Query 273807 TCCTTGCCACCTTGCAGCCTCGAACCAAACTGACCCTCGGGCAGTAGCCAGTTTATGTTG 273866 || ||||||||||| || || | |||||||| || || | || || || || Sbjct 22960 TCTTTGCCACCTTGAAGTCTTGTTCCAAACTGGCCAAGTGGTTGAAGTAGATTAATATTA 23019 Query 273867 TTGCTACCGACGTAATCCTGAGCCATATTCACGATAGTCCCCTGAAGGGATACCTCGCCG 273926 || || || || ||| ||| |||| ||| | || || | | || | || ||| Sbjct 23020 TTACTTCCCACAAAATTCTGTGCCAAATTGATAATGGTTGACATCAAAGACATTTCACCG 23079 Query 273927 TGGTGATAGGCGCTGTGTTCGGCGATATAACCACTGAACTGAGCAACCTTCACAT--CGC 273984 || |||||||| || ||| | | | ||| || || || || || || | || Sbjct 23080 TGATGATAGGCACTCAATTCACCAACCGATCCAGCTAATTGGGCCACTTTTACTTCACGT 23139 Query 273985 TCGTCAAGTTTCGCTTGAATGCGGAATACAACACCTTCCGCTGCGAGGGCTTGAACCCAT 274044 | |||| || || ||||| | ||| ||| || ||||| || || || |||| Sbjct 23140 TTGTCA--TTACGTTTGAAACAAGTATATGTCACTTTACGCTGTCCAGGTTTAAATCCAT 23197 Query 274045 CAACGACCGATGGAATACTGCGTTCCAAAT-CATACCGAGAGAACAAAATCAGTTCCTTG 274103 | || |||||| ||| ||||| || |||| | ||||| | ||||| ||| ||| Sbjct 23198 CCACCGACGATGGTATAGATCGTTCATTATCCATATTG-GAGAAAAGAATCAATTCTTTG 23256 Query 274104 T 274104 | Sbjct 23257 T 23257 >seq33 Length=218725 Score = 89.7 bits (98), Expect = 1e-12 Identities = 223/335 (67%), Gaps = 8/335 (2%) Strand=Plus/Plus Query 273511 TACCTTTGAAACCTTTGTACCACGGCTTCATGGCTACCATAGGTTCACCCTTC---ATCA 273567 ||||| ||||| |||| ||||| || ||||| | ||| |||||| | || | || Sbjct 14104 TACCTCTGAAATCTTTATACCATGGATTCAT---TTCCAAAGGTTCTTCATTACGAAGCA 14160 Query 273568 GTCGCTCCACATTACCAATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGACCAAC 273627 ||| | | ||| ||| |||| || || | ||| | ||||| || ||| ||||| Sbjct 14161 TTCGTTTAATGTTATCAACAATAGCTCGTGGATCATAATTAGGAACCTTGGTACTCCAAC 14220 Query 273628 CGGTGCCAATACCGGAAGAACCATTCACCAGAATACTCGGGATAATTGGGACATAATATT 273687 ||||||||||||| | |||||| || | || | || || ||||| ||||| |||| Sbjct 14221 CGGTGCCAATACCTTCTGCACCATTGACTAAAACCATTGGAATGATTGGAACATAGTATT 14280 Query 273688 CGGGCTCAATTTTATCACCATCGTCGTAAAGGTACTTCAACAAAGCATCATCCGTATCAA 273747 | || |||||| | | ||| || || |||| ||| || | ||||||| || Sbjct 14281 CAGGTTCAATTCTTAGATTATCATCATACTGGTAAGCCAATAATGGATCATCC-AATGGT 14339 Query 273748 CGAAA-ACCTTTCGCGTCTGAGGATTCAGTTTCGTGAAAATGTACCTGGCACTCGCATGG 273806 |||| | || | | | ||| | | |||||||| || | | ||| ||| Sbjct 14340 GGAAATAATTTCCTTGCCAATGGACTTAAACATGTGAAAATATAACGAGGACTAGCAGCA 14399 Query 273807 TCCTTGCCACCTTGCAGCCTCGAACCAAACTGACC 273841 || ||||||||||| || || | |||||||| || Sbjct 14400 TCTTTGCCACCTTGAAGTCTTGTTCCAAACTGGCC 14434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046716320243724