Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq757 179 8e-40
seq1212 114 3e-20
>seq757
Length=524386
Score = 179 bits (198), Expect = 8e-40
Identities = 377/557 (68%), Gaps = 4/557 (1%)
Strand=Plus/Plus
Query 281468 GATTTTACCTTTGAACCCCTTGTACCACGGTTTCATTTCGACGAGGTCCTC-TCCAGATA 281526
|||| | || | || || ||| |||| ||||||||| | ||| | ||| |||| |
Sbjct 430471 GATTGTGCCAGTAAATCCTTTGAACCATGGTTTCATTG-GTCGAATTTCTCGTCCATGCA 430529
Query 281527 TCAAACGCTTCACGTTGTCTACGATGTCTTTGGGATTATAACTGGGAATGTTAGTAGACC 281586
| ||||| || | || || || || || | ||||||||| ||||||| || ||| ||
Sbjct 430530 TTAAACGTTTAATATTTTCAACAATTTCCCTTGGATTATAATTGGGAATTTTTGTACTCC 430589
Query 281587 AACCGGTTCCAATACCACTTGAACCATTTACCAAAATACTCGGGATAATAGGTACATAAC 281646
|||| || |||||||| | ||||| ||||||| | || ||||| || ||||||
Sbjct 430590 AACCAGTACCAATACCTTCGGCTCCATTGACCAAAACCATTGGAATAATTGGAACATAAT 430649
Query 281647 ATTCTGGTTCAATTTTATCACCATCATCATACAAATACTTCAGAAGGTTATCATCTGTAT 281706
|||||||||||||||| | ||||||||| | ||| |||| | ||||||| ||
Sbjct 430650 ATTCTGGTTCAATTTTTAGATTATCATCATAAAGATAATTCAATAATGGATCATCT-AAT 430708
Query 281707 CGACGAAAACCTGTCGCGTCT-TAGGGTTCAGTTTCGTGAAGATATACCTTGCACTCGCG 281765
| |||| | || || || || || | ||||| ||||| | | ||| ||
Sbjct 430709 TGTGGAAATAATTTCCTTGCTACAGTATTAAGCATGGTGAATATATAACGAGGACTGGCA 430768
Query 281766 TGGTCTTTACCACCCTGCAGCCTCGACCCAAACTGACCCTCCGGCAACAACCAGTTAATG 281825
||||| ||||| || || | | || || ||||| ||| ||||| |||||||
Sbjct 430769 GCATCTTTGCCACCTTGAAGTCGTGTACCGAATTGACCAATCGGTAACAATAAGTTAATA 430828
Query 281826 TTATTGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGCGATACCTCA 281885
|| || || ||||| ||| || |||| || | ||||||| | ||| ||||| |||
Sbjct 430829 TTGTTACTTCCGACAAAATTTTGTGCCAAATTTATGATTGTCGACATAAGTGATACTTCA 430888
Query 281886 CCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCACTGAACTGTGCTACCTTCACGTCT 281945
|| || ||||| || || |||||| | || |||| || || || || || || ||
Sbjct 430889 CCATGATGATAAGCACTATGTTCGCCGACCGAACCGGCTAATTGAGCCACTTTAACTTCA 430948
Query 281946 GATGTCAAGTTGCGTTTGAAAGCGCAATATAATACTTTTCGTTGAGAAGGCTTGAAACCA 282005
| | || ||||||||| | |||| ||||| ||||| ||| || || |||
Sbjct 430949 CGTTTATCATTACGTTTGAAACAAGTAAATAACACTTTACGTTGGCCAGGTTTCAATCCA 431008
Query 282006 TCAACGACAGACGGAAT 282022
|| || | || |||||
Sbjct 431009 TCCACCAACGAAGGAAT 431025
>seq1212
Length=1133891
Score = 114 bits (126), Expect = 3e-20
Identities = 255/378 (67%), Gaps = 6/378 (2%)
Strand=Plus/Plus
Query 61088 TCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAAGGAC 61147
||||||| || || ||| ||||||| ||||| |||||| | || ||| |||| ||
Sbjct 1007896 TCAAGCAAGTACTTCAGAATTGTATGGTAAAGTACAAGAAGTACCGCAACGTGAAACAAC 1007955
Query 61148 TCCGTTTTATCCTCGTAGCCCGTATGGTGTTGCAAAACTATACGCTTACTGGATTTGTAA 61207
|| |||||||| || || || |||||||||||| || || || |||||| |
Sbjct 1007956 ACCATTTTATCCACGATCTCCATACGGTGTTGCAAAATCATTTGCCTATTGGATTGTTGT 1008015
Query 61208 AAATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCG-ATTTGTTTCAATCACGAGA 61266
||||| || || | |||| |||||||| || | | | ||| |||||||| ||
Sbjct 1008016 CAATTATCGTGAAGCTTATGAAATGTTTG-CCGTCAATGGTATTCTATTCAATCATGAAT 1008074
Query 61267 GTCCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTACGAAGGCGGTTGCAAATATTT 61326
|| | | ||| | ||||| || ||||| ||||| | || ||||| |||
Sbjct 1008075 CACCTAGACGTGGTGAAACATTTGTCACACGTAAGATTACACGTGGTGTGGCAAAAATTG 1008134
Query 61327 TTAACGGTGTCG--AAAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGGG 61384
|| | ||| || ||| ||| | | || || | || || ||| ||||||||||
Sbjct 1008135 TT--CTTAATCGACAAGAATTCATCGAATTGGGTAATTTGGATTCAAAACGAGATTGGGG 1008192
Query 61385 ATATGCGGAAGATTATATCGAGGCTATGTGGTTGATGTTGCAACAAGATACTCCAGATGA 61444
|||| |||||| | || || |||||||| ||||| |||||||| | ||| || ||
Sbjct 1008193 CCATGCACGTGATTATGTTGAAGCCATGTGGTTAATGTTACAACAAGAAAATCCGGAAGA 1008252
Query 61445 CTACGTTATTGCGACTGG 61462
| || ||||| || ||
Sbjct 1008253 TTTTGTCATTGCAACCGG 1008270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057806082444860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |