Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq1 269 3e-67
>seq1
Length=3593316
Score = 269 bits (298), Expect = 3e-67
Identities = 596/882 (68%), Gaps = 14/882 (2%)
Strand=Plus/Minus
Query 15902 ACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAA 15961
||||| || |||| || || ||| |||||||| || || || | ||| || |||||
Sbjct 930126 ACACCACTTTTTTGATATTCGGCAACACGTTTTTCAAAAAAATTTGATTTACCTTCTAAT 930067
Query 15962 GATATATTTTCCATAAAATCAAAGGGATTAGTAGCTGAA-AATATCTTAGAGTACCCCAG 16020
||||| | ||||||||||||||| ||||| || | | | ||| | || | | | |
Sbjct 930066 GATATTTGTTCCATAAAATCAAATGGATTTGTTGTTTTATAATGTTTTTCACAATCTAA- 930008
Query 16021 TTCCGTAACTAATCTATCTGCTACAA-ATTCTATATATTGACACATTAAGTCGCAATTAA 16079
||| | ||| | ||| || |||| |||| ||||| | ||||||| | ||| |
Sbjct 930007 TTCAACCAATAAACGATCGGC-ACAATATTCAATATAATCGGACATTAATTTAGCATTCA 929949
Query 16080 TTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTT 16139
| || || | | ||| || | || | || | ||||| |||||| || ||| || |
Sbjct 929948 TACCGATCAATGATACTGGTAATGCATCGGTAAGAAATTCTTGTTCAATATTAACAGCAT 929889
Query 16140 CTTTAATGATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGG---TGTTTAAACA 16196
| |||| || || |||| | || | || | | || | || | |||||
Sbjct 929888 CAATAATAATTTCAACAATTCGTTGT---GATGATGGACGATTACGAATATGATGAAACA 929832
Query 16197 TTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAG 16256
||||| || || || ||||||| |||||| || | || | ||| || ||||| |
Sbjct 929831 AAAGACAGGCAAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATTTGAAAAGG 929772
Query 16257 TTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAA 16316
| | || |||||| || ||||| |||| ||| || || || |||||||| || ||||
Sbjct 929771 TAAGACCAGGCATTAGGCCACGTTTTTTTAGCCAAAAAATTGCTGCAAATGAACCGGAAA 929712
Query 16317 AGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTAT 16376
| ||||| || ||||||| ||||| || ||||| ||||| || | ||| | | ||
Sbjct 929711 AAAATATTCCTTCAACAGCAGCAAATGCAATTAAACGTTCGGCAAATGTAACCGAATCAT 929652
Query 16377 TACGAATCCATTTCTGTA-CCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATG 16435
| |||| | || |||||| ||||||| | || |||| | | |||
Sbjct 929651 CTTGTGTCCAACG-TATAGCCCATTTAGCTTTTTTCTCTACACAAGGTAGATTACGTATA 929593
Query 16436 GCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTG 16495
|| || || | |||| ||| | | ||| || ||| |||| ||||| |||
Sbjct 929592 GCATTGAATAGAAAATCTTGTTCATTACGATCCGATACATAGGTATTAATCAATAATGAA 929533
Query 16496 TACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCC 16555
||||||||||| || | || || || || || ||||||||||| || || || || ||
Sbjct 929532 TACATTTCTGAATGAACATTTTCGATAGCAATTTGAAATCCATAAAAACAACGTGCTTCT 929473
Query 16556 GCTATTTGTACTTCCACGTA-AAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACT 16614
| ||||||||| || ||| | ||| ||||| || | || ||||| || ||||| |||||
Sbjct 929472 GGTATTTGTACATC-ACGAATAAAACGTTCAGCTAAATTTTCATTAACAATACCATCACT 929414
Query 16615 TGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATG 16674
|||||||||||| ||||||| || |||||||| |||||| | || | | |||
Sbjct 929413 TGCAGCAAAAAAAGCCAATACATGTGAAATGAAATGTTTTTCATTCGAATTTAATTTATT 929354
Query 16675 CCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGC 16734
||||| | | ||| | | || ||| |||||||| |||||||| || | ||
Sbjct 929353 CCAATGTACAAGATCATGGCTTAGATCTACTTCTTCAACTGTCCAAAATGATGCTTCAGC 929294
Query 16735 CTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776
||||| |||||| |||||||||||| ||||| || |||||
Sbjct 929293 TTTTTTGTACATTGTCCAAATATCATGATATTGAATTGGAAA 929252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511405948877040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |