Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq458 127 2e-24
>seq458
Length=503182
Score = 127 bits (140), Expect = 2e-24
Identities = 231/335 (69%), Gaps = 10/335 (3%)
Strand=Plus/Minus
Query 18627 ACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATGGTTTATCCGCGGG 18686
|| ||||| ||||| |||||| | | || || ||||| || ||||||||||| ||
Sbjct 281012 ACAACAAAACGTGTATTTTGGCGTGGTGTTGTTGAAGAATTATTATGGTTTATAAAAGGT 280953
Query 18687 TCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATATGGGATATATACGGATCG 18746
||||| ||||| ||| || | ||| |||| | || | || |||||| | | || ||
Sbjct 280952 TCAACTGATTCGAAAAAATTATCCGAAAAAGGTGTAAAAATTTGGGATGCAAATGGTTCA 280893
Query 18747 AGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGACACACGGGGGACCTTGGCCCCATT 18806
| ||||||| |||| ||| || | | | || || || || || || ||
Sbjct 280892 AAAGAATTTCTTGATAGTCTTGGTTTTATTGATCGTCAAGAAGGTGATCTAGGTCCTGTT 280833
Query 18807 TACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAATCAAACTATTTA 18866
|| || || || |||||||||||||| || |||||| || ||||||||| |||
Sbjct 280832 TATGGTTTTCAATGGAGACATTTTGGTGCCGAATAT----CGTGATAATCAAACTGATTA 280777
Query 18867 CA----GCAAGGAATCGATCAGCTGCAAACTG-TTATAGATACAATTAAAACAAACCCAG 18921
| ||||| || ||||| | |||| | ||||| | ||||| |||||||| |||
Sbjct 280776 TAATGGTCAAGGTATTGATCA-ATTAAAACAGCTTATAAAAACAATCAAAACAAATCCAA 280718
Query 18922 AAAGCCGACGAATGATTATATCGTCTTGGAATCCA 18956
| || || ||||||||| || |||||||||||
Sbjct 280717 ATGATCGTCGTATGATTATAACGGCTTGGAATCCA 280683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399497563241490
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |