Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq458 127 2e-24 >seq458 Length=503182 Score = 127 bits (140), Expect = 2e-24 Identities = 231/335 (69%), Gaps = 10/335 (3%) Strand=Plus/Minus Query 18627 ACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATGGTTTATCCGCGGG 18686 || ||||| ||||| |||||| | | || || ||||| || ||||||||||| || Sbjct 281012 ACAACAAAACGTGTATTTTGGCGTGGTGTTGTTGAAGAATTATTATGGTTTATAAAAGGT 280953 Query 18687 TCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATATGGGATATATACGGATCG 18746 ||||| ||||| ||| || | ||| |||| | || | || |||||| | | || || Sbjct 280952 TCAACTGATTCGAAAAAATTATCCGAAAAAGGTGTAAAAATTTGGGATGCAAATGGTTCA 280893 Query 18747 AGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGACACACGGGGGACCTTGGCCCCATT 18806 | ||||||| |||| ||| || | | | || || || || || || || Sbjct 280892 AAAGAATTTCTTGATAGTCTTGGTTTTATTGATCGTCAAGAAGGTGATCTAGGTCCTGTT 280833 Query 18807 TACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAATCAAACTATTTA 18866 || || || || |||||||||||||| || |||||| || ||||||||| ||| Sbjct 280832 TATGGTTTTCAATGGAGACATTTTGGTGCCGAATAT----CGTGATAATCAAACTGATTA 280777 Query 18867 CA----GCAAGGAATCGATCAGCTGCAAACTG-TTATAGATACAATTAAAACAAACCCAG 18921 | ||||| || ||||| | |||| | ||||| | ||||| |||||||| ||| Sbjct 280776 TAATGGTCAAGGTATTGATCA-ATTAAAACAGCTTATAAAAACAATCAAAACAAATCCAA 280718 Query 18922 AAAGCCGACGAATGATTATATCGTCTTGGAATCCA 18956 | || || ||||||||| || ||||||||||| Sbjct 280717 ATGATCGTCGTATGATTATAACGGCTTGGAATCCA 280683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399497563241490