Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq458 159 3e-34
>seq458
Length=503182
Score = 159 bits (176), Expect = 3e-34
Identities = 228/322 (71%), Gaps = 0/322 (0%)
Strand=Plus/Plus
Query 101919 CTGAANNATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTAT 101978
|||| ||||||||| || | ||| | | ||| | || |||||||| || || |
Sbjct 280679 CTGATGGATTCCAAGCCGTTATAATCATACGACGATCATTTGGATTTGTTTTGATTGTTT 280738
Query 101979 CAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTAT 102038
|| | |||||||||||| |||| |||| || |||||||| | | | ||
Sbjct 280739 TTATAAGCTGTTTTAATTGATCAATACCTTGACCATTATAATCAGTTTGATTATCACGAT 280798
Query 102039 ATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTC 102098
|||| || || ||||| ||||| ||||| ||||| ||||| || ||||| ||||| | |
Sbjct 280799 ATTCGGCACCAAAATGTCTCCATTGAAAACCATAAACAGGACCTAGATCACCTTCTTGAC 280858
Query 102099 TGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCA 102158
||| ||||||||| |||| | |||| | | || ||||| ||||||||||| | |
Sbjct 280859 GATCAATAAAACCAAGACTATCAAGAAATTCTTTTGAACCATTTGCATCCCAAATTTTTA 280918
Query 102159 CGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTT 102218
| || | | |||| | ||| ||||| || ||| | |||||||| || | |||||
Sbjct 280919 CACCTTTTTCGGATAATTTTTTCGAATCAGTTGAACCTTTTATAAACCATAATAATTCTT 280978
Query 102219 CAACAACACCTCTCCAAAATAC 102240
|||||||||| | |||||||||
Sbjct 280979 CAACAACACCACGCCAAAATAC 281000
Score = 86.0 bits (94), Expect = 5e-12
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 101819 ATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGA 101878
|||||||| |||| |||||| |||||||||||||| | ||| |||||||||||||||
Sbjct 280522 ATATCAGCGGATCGTTGATAAAGTTGACAGGAAAGTTCATCATTACAGACATAAAATTGT 280581
Query 101879 CTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAA 101923
|| |||||| || || || |||||||||||| ||| ||
Sbjct 280582 GCCAAACAATGACATGGTGGTAAAGCCATTTTAGGAAGATCTAAA 280626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361245379565822
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |