Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1 540 1e-148 seq569 477 1e-129 seq1101 149 7e-31 seq990 104 3e-17 >seq1 Length=3593316 Score = 540 bits (598), Expect = 1e-148 Identities = 1196/1781 (67%), Gaps = 42/1781 (2%) Strand=Plus/Minus Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209 || |||||||||||||| | || | | ||||| |||||| | ||||| ||||| | | Sbjct 3537858 ACCTGAAATTCTCCAGAAAGAACACGTCTTGTGTATATATTAGTTGTATAAGGTTCGATA 3537799 Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269 |||||||| || || | |||||| ||||| || || || ||||| || ||||| | ||| Sbjct 3537798 GACTCATTGTTGCCAAGAATTTGTGCAGTCGAAGCTGTTGGCATTGGAGCCACAAGCAAA 3537739 Query 53270 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCC 53329 ||||||| | || ||| | |||| | ||| | | | ||||| ||||||||| Sbjct 3537738 CTATTTCGTATTCCATATTTAGCGATTCGAGATTTCAAATCATTCCAATCCCAAAGATCT 3537679 Query 53330 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTA----CTGGCGTACGATCC 53385 | ||| |||||||| || ||| |||| | |||| Sbjct 3537678 GTTGGTTTTCGATTCCACATATCAAACTGTAGAATGCCTTTAGATACTGGTG----ATCC 3537623 Query 53386 TACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACC 53445 | |||| || || ||| | |||| | | |||| ||||||||||| ||||||| || Sbjct 3537622 TTCATAAGTTTCATATTGACCTTTTTCTTGGGCTAATTCACAACTCGTTTCTAATGATCC 3537563 Query 53446 GTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGG 53505 |||||||| ||||| || |||| |||| || | | ||||| ||||| ||||| Sbjct 3537562 ATAATAAATTGTTTCAAAAATCTGAATATTGAGCAATCGAGCTTCTTCACTATCGAATGG 3537503 Query 53506 ATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 53565 |||| | | ||||||||| |||||||||||||||||||| || || || |||| ||| Sbjct 3537502 ATAACGCATCAAAATAAACGCATCTGCTAATCCTTGAACACCGATTCCCATTGGTCGATG 3537443 Query 53566 TCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT 53625 | ||| || || ||||||||| | |||||| ||| | | || |||| ||| | Sbjct 3537442 ACGAAGATTCGAACGTTGAGCTTCTGGTACAGGATAGTAAGTCACGTCGATAACTTTGTC 3537383 Query 53626 GAGGTTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCC 53682 || || | | |||| | ||||| | |||| ||| ||||||||| || Sbjct 3537382 CAGATTACGAGTTACAA---CCTTGACAATGGATTTCAATTTTTCAAAATCAAAGATTCG 3537326 Query 53683 ATCTATT------ACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTC 53736 | | || ||||| | |||||||| || || || |||||||| |||||||| || Sbjct 3537325 TTTTTTTGGATCAACAAATTTATTCAATGCGATTGAAGCTAGATTACAGACGGCTACTTC 3537266 Query 53737 AT---TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCC 53793 || ||| || | ||||| | || || || |||||||| ||| ||||| || || Sbjct 3537265 ATCTTTAG-AT--GAATATTCCACAATTTCGGTACAAAGATTCGAACATTTGATTGTACC 3537209 Query 53794 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACC 53853 | |||||||||||| ||| ||||| ||| || |||| ||| |||| || || Sbjct 3537208 GAGATTTTGTTGATTTGATTTTCGATTACAATGATCTTTGTAAACCATGTATGGTGTTCC 3537149 Query 53854 AGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGC-CTTTATTATAGATT 53912 |||||| || || ||||| | ||| || ||| | |||||||| | ||| | ||| Sbjct 3537148 AGTTTCGATTTGTGATTCAAGAATAGCAAACCAAAGAACACGAGCACGACATTGT-GATC 3537090 Query 53913 TGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACAT 53972 |||| ||||| |||| || | ||| | | |||||| || || |||||| || Sbjct 3537089 GATATCGTTTTTCATTTTCATAACCTTCATAAAGTTTTTCAAATTCTTCACCCCAACAAT 3537030 Query 53973 TGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTC 54032 || || |||||||||| |||||||||||| |||||| ||| || | | || | Sbjct 3537029 CAAATAACCCGGGACATTCATGCGGACACATCAATGACCACATTCCATCTTGATCTACGC 3536970 Query 54033 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCT 54092 ||||||| || | |||||||||||| ||||| ||||| ||| | | | |||||| Sbjct 3536969 GTTTCATGAATAAATCAGGAATCCATAGAGCATAAAATAAATCACGTGCACGTAGTTCCT 3536910 Query 54093 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 54152 | || ||||| || |||| || || | | |||||||||||||| ||||||| Sbjct 3536909 CCGAACCGGTATTTTTGCGAAGACTTAGAAAATCAAAGATATCAGAATGCCATGGTTCCA 3536850 Query 54153 AGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 54212 || |||| | ||||||| |||||||| || || ||||| | |||| ||| || | Sbjct 3536849 GATAGATGGCAAATGCTCCAGGACGTTTGTTACCACCTTGATCAACATATCGAGCAGTAT 3536790 Query 54213 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 54272 |||| || || | | ||| ||||| | ||||| || ||||| || |||| |||| Sbjct 3536789 TATTGTATACGCGTAGCATAGGAATCAAGCCATTAGAGATTCCATTTGTACCGGCAATAT 3536730 Query 54273 AGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGA 54332 | || ||| | || ||| | ||| ||||| || || || || ||| |||| Sbjct 3536729 AACTACCAGAAGATCGGATACAATGAATATTAAGACCAATGCCACCAGCTGATTTTGAGA 3536670 Query 54333 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 54392 | | || ||| |||| | ||||||||| || || || || |||||||| |||| | | Sbjct 3536669 TGATGGCACATTGTTTAAGCGTATCATATATACCTTCAATGCTATCATCACTCATAGTGA 3536610 Query 54393 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 54452 | |||||||| || | ||| | || | ||||| ||||| || || ||||| || | Sbjct 3536609 GCAGAAAACATGATGATAATTGCGGCCGTTTTGTTCCGGCATTGAACAACGTAGGTGATG 3536550 Query 54453 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCC 54512 | || |||||||| ||||| || | | ||| || || || || || | || ||||| Sbjct 3536549 CATGTGTAAACCAATTTTCCGATATCAAATTATATGTTTCAATGGCAGCATCAATATCAT 3536490 Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572 ||||||| || | || |||||| ||||| |||||||||||||| || | || Sbjct 3536489 CACGATGAATACCAATAGCACAACGCATCAACATATGCTGAGGTCTTTCTACAACTTTAC 3536430 Query 54573 TGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 54632 | ||||| ||||| || | | || ||||| ||||| ||||| ||||| || Sbjct 3536429 CGCCAATTTTGAGCAAATAACTTCGATATAATGTTTTGAAACCGAAATAATTGTAATTAA 3536370 Query 54633 AGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTAT-ATTTGTTAACTA-CATC 54690 | || || || || || || | || || | || | || | | ||| | || || Sbjct 3536369 AATCACGATCATAGATTATGGCCGAATTAA---TA-CGTTCTGAATTGGCCATTATGAT- 3536315 Query 54691 CATGGTAA--TACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTG-ACATAG 54745 || ||| | ||| | || || |||| | ||| | | |||| ||| | Sbjct 3536314 -ATCATAAATTTCTTTCGCTATGATTGGAGTTGGCAGACCAGTATGCTCATTGCTCATCG 3536256 Query 54746 TTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGAT 54805 || ||||||| | || || || ||| ||| || ||||||||||||| ||| || Sbjct 3536255 -TATATAAATCATGAATGACATCGGAAAAGTTTTTCTTAGTTTCTTTGTGTAAATTCGAA 3536197 Query 54806 ACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCT 54865 | || |||| || || |||||||| ||||| ||||| || || | || ||||| Sbjct 3536196 ATGGAAATTCGGGCAGCAAGAATGGCGTAATCAATATGTTCGGTGGTCAATGTAGCTGCG 3536137 Query 54866 ATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCC 54906 ||||| |||| || ||||||||| ||||| || || Sbjct 3536136 ATTTCAGCTGCCAATTCATCCAATTCTTTGGTTGTAACACC 3536096 Score = 461 bits (510), Expect = 9e-125 Identities = 703/991 (71%), Gaps = 18/991 (2%) Strand=Plus/Minus Query 23778 TTTATGTTTCTTTAAAAGTCAACATCTA-AAGAAAAA--TGATTGTCTTCTTGAGACATA 23834 ||| | ||| |||||| ||| |||| || ||| | |||| || | | ||||| Sbjct 930186 TTTTTTTTTGATTAAAAATCAGCATCGGTAACAAATACCTGATCTTCAGGTCGTGACATG 930127 Query 23835 ACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAAT 23894 || || ||||||| ||||| | ||||||||||| |||||||| | ||||||||||||| Sbjct 930126 ACACCACTTTTTTGATATTCGGCAACACGTTTTTCAAAAAAATTTGATTTACCTTCTAAT 930067 Query 23895 GATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAAT 23954 ||||| | |||||| ||||| ||||||| || ||||| | ||| | | | ||| Sbjct 930066 GATATTTGTTCCATAAAATCAAATGGATTTGTTGTTTTATAATGTTTTTCACAATCTAAT 930007 Query 23955 TCAGAAATCAATCTATCTGCGACAA-ACTCCATATATGTTTTCATCATTTCACAATTCAT 24013 ||| | || | ||| || |||| | || ||||| ||| | || | |||||| Sbjct 930006 TCAACCAATAAACGATCGGC-ACAATATTCAATATAATCGGACATTAATTTAGCATTCAT 929948 Query 24014 TCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTC 24073 || || | | ||||| | || | ||||||||||||||||||||| || || || Sbjct 929947 ACCGATCAATGATACTGGTAATGCATCGGTAAGAAATTCTTGTTCAATATTAACAGCATC 929888 Query 24074 TGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGA----TACAATAAATGTTTAAACA 24129 | ||||| || || || || | |||| ||| | | ||| | ||||| Sbjct 929887 AATAATAATT--TCA-ACAATTCGTTGTGATGATGGACGATTACGA-ATATGATGAAACA 929832 Query 24130 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 24189 | ||| || ||||| || |||| || || || | ||| ||||| || ||||| | Sbjct 929831 AAAGACAGGCAAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATTTGAAAAGG 929772 Query 24190 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 24249 | || || |||||||||||||| ||||| |||||||| || | |||||||| || |||| Sbjct 929771 TAAGACCAGGCATTAGGCCACGTTTTTTTAGCCAAAAAATTGCTGCAAATGAACCGGAAA 929712 Query 24250 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCA----TAACCGGCGCTG 24305 | || |||||||| || || ||||| ||||| | | ||| || |||||| | Sbjct 929711 AAAATATTCCTTCAACAGCAGCAAATGCAATTAAACGTTCGGCAAATGTAACCGAATCA- 929653 Query 24306 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 24365 || ||| |||| | |||||| | || || || | ||||||||| | | |||| Sbjct 929652 TCTTGTGTCCAACGTATAGCCCATTTAGCTTTTTTCTCTACACAAGGTAGATTACGTATA 929593 Query 24366 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 24425 ||||| || ||| | | || |||||||| ||| ||||| |||| |||||| | | Sbjct 929592 GCATTGAATAGAAAATCTTGTTCATTACGATCCGATACATAGGTATTAATCAATAATGAA 929533 Query 24426 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCG 24485 |||||||| ||||||| ||||| || || ||||||||||| || ||||| | || || Sbjct 929532 TACATTTCTGAATGAACATTTTCGATAGCAATTTGAAATCCATAAAAACAACGTGCTTCT 929473 Query 24486 GTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG 24545 | || ||||| || | ||| ||||| |||||||||||||| || || || ||||| Sbjct 929472 GGTATTTGTACATCACGAATAAAACGTTCAGCTAAATTTTCATTAACAATACCATCACTT 929413 Query 24546 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTC 24605 || |||||||| |||||||||||| || |||| |||||| | | ||| ||||||| Sbjct 929412 GCAGCAAAAAAAGCCAATACATGTGAAATGAAATGTTTTTCATTCGAATTTAATTTATTC 929353 Query 24606 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 24665 |||| | ||| | || ||| |||||||| ||||||||||||||||| || || Sbjct 929352 CAATGTACAAGATCATGGCTTAGATCTACTTCTTCAACTGTCCAAAATGATGCTTCAGCT 929293 Query 24666 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGA 24725 ||||| ||||| |||| || |||||||||||||||||||| | |||||| | ||||||| Sbjct 929292 TTTTTGTACATTGTCCAAATATCATGATATTGAATTGGAAACAAAACAAAACGATTTGGA 929233 Query 24726 TTTTTTGCAAGGATTGGTTCCATAACTAAAT 24756 |||| ||| | |||||| | |||||| Sbjct 929232 TTTTCACGAAGTAATGGTTCATCATCTAAAT 929202 Score = 120 bits (132), Expect = 4e-22 Identities = 159/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 52829 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 52888 || ||||| ||||||||||| |||||||| ||||| | || || ||| || ||||| Sbjct 3538235 GCTGGTTTTGTACGTAGATAATACATTCCGGTTTTCAATCCTGAACGCCAACCAAAAAAA 3538176 Query 52889 TGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 52948 ||||| ||| | ||| | ||| | || || | ||| || || | ||||||||| Sbjct 3538175 TGCATTGATGTCAATTTTGTGATACTGGTTTCAGCAAAATGAATGTTTAATGATTGACTT 3538116 Query 52949 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 53008 |||||||| ||||| || | || ||||||| | | ||||| || ||||| |||||| Sbjct 3538115 TGATCGATAAAGGCACCACGATCAACAGCCATCTGGACAATCGTTTTCTGTGGTATTTCC 3538056 Query 53009 CAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAA 53045 |||| |||||| || || | | ||||||||| |||| Sbjct 3538055 CAAACAGTTTTGTACAAGTTTC-GAATATCTTCCGGAA 3538019 >seq569 Length=351751 Score = 477 bits (528), Expect = 1e-129 Identities = 1083/1614 (67%), Gaps = 45/1614 (3%) Strand=Plus/Minus Query 52828 TGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAA 52887 ||| ||||| || || ||||| |||||||| ||||||| || || ||| || ||||| Sbjct 124904 TGCCGGTTTTGTTCGAAGATAATACATTCCTGTTTTTAATCCATTACGCCAACCATAAAA 124845 Query 52888 ATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACT 52947 |||||| ||| | ||| | | | || || || ||||| | ||| | |||||||| Sbjct 124844 ATGCATTGATGTAATTTTTGCTTTAGATGGTTCAGCCATATGTACATTTAATGATTGACT 124785 Query 52948 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTC 53007 ||||||||| || || || | || |||||| | || || |||||||| ||||| Sbjct 124784 TTGATCGATAAATGCACCACGATCAATAGCCATATCGATAATACATTTTTGTGGTATTTC 124725 Query 53008 CCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG------TATTCTGAAT 53061 ||| | |||||||| | | || ||||| || || | ||| ||| ||| || Sbjct 124724 CCATACTGTTTTATATAATGATTTGATATCATCCGGTA---TTGAATCAATATCCTGTAT 124668 Query 53062 AGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGT 53121 || |||| || | ||||| ||| || | ||||||||||| | | | | Sbjct 124667 TGAACCACGATTAGCAATAATAGAATTTTTCAATTCATCATTCCAAAGTCCCAAATTAAT 124608 Query 53122 TAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGT 53181 |||| || |||| | ||| ||||||| | | ||| || |||| || | | ||| Sbjct 124607 TAAATCTTTAAGTAAATGTTGATTAACAATATCAAAACTACCGGACATAACACGTCTAGT 124548 Query 53182 GTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGA 53241 || ||||| ||||| ||||| | || |||||||| || | |||||| || ||||| Sbjct 124547 ATAGATATTTGATGTATATGGTTCAAATGATTCATTATTACCAAGAATTTGTGCGGTTGA 124488 Query 53242 TGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATC 53301 ||| || ||||| ||||| |||||||||||||||| || ||| ||| | ||||| || Sbjct 124487 TGCTGTTGGCATTGGTGCAACCAATAAACTATTTCGAATACCATATTTGGAAATTTTTTC 124428 Query 53302 TTTTAGAGGTTC---CCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTG 53358 ||| | ||| ||||||||||||||| | ||| | ||| Sbjct 124427 TTTCAA---TTCAGACCAATTCCAAAGATCGGTTGGTGTACGATTCCACATATCATATTG 124371 Query 53359 TAGAATACC----GTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCT 53414 ||||||||| | |||||| |||||| ||| || || ||||| || | | | Sbjct 124370 TAGAATACCTTTTGATACTGG----TGATCCTTGATAAGTTTCATATGGACCATATTGTT 124315 Query 53415 CAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTAT 53474 | |||| ||||||||| || || |||||||| |||||||| ||||| || || | ||| Sbjct 124314 CTGCTAATTCACAACTTGCTTCCAATGCACCATAATAAATTGTTTCAAATATTTGGATAT 124255 Query 53475 TTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTA 53534 | | | || |||||||| || ||| |||||||| ||| ||| | || || || |||| Sbjct 124254 TCATTTTTTTTGCTTCCAAACTTTCATATGGATAACGTAATAGACTGAATGCATCGGCTA 124195 Query 53535 ATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAA 53594 | ||||| ||||||| || ||||||| ||| | ||| || | | | || || | Sbjct 124194 AACCTTGTACACCAAGTCCAATAGGTCGATGACGTAAATTTGAAAGTCTTGTCTCCGGTA 124135 Query 53595 TAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTGACCACAT 53654 |||||||||||| ||| |||||||| || | ||| | |||||||| || | | Sbjct 124134 ATGGATAATAATTACCATCAATAATTTTGTTTAAATTTTTTGTCATTACTTTAACAATTT 124075 Query 53655 CCTTCAGTTTGAGAAAATCAAATTGTCCATCTATT------AC-AAACATGTTCAATGCA 53707 || ||||| | |||||||||| || | || || |||| || | |||| | Sbjct 124074 TTTTAAGTTTTTCATAATCAAATTGACCGAGTTTTTGATCAACAAAACGTGGT-AATGAA 124016 Query 53708 ATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTG 53767 || ||||| | |||||| ||||| || |||| | | ||||| | || || || Sbjct 124015 ATCGATGCTAAATTACATACGGCCACTTCATCTGGTGATGAATATTCAACAATTTCTGTA 123956 Query 53768 CAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCA 53827 |||||||| ||| || || || || | |||||||||||| || ||||| | Sbjct 123955 CAAAGATTTGAACATTTAATTGTACCAAGATTTTGTTGATTTGATTTACGATTACAATGA 123896 Query 53828 TCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAG 53887 || || || | || |||| ||||| |||||||| || | |||| || || ||| Sbjct 123895 TCTTTGTATAACATATATGGAGTACCGGTTTCAATTTGTGCATCTAATATTGCAAACCAT 123836 Query 53888 ACGACACGAGCCTTTA-TTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAA 53946 | | | || |||| | | | | || | ||| | ||| ||| | ||| || Sbjct 123835 AATTGATGTGCTTTTACCTGTTG-CCTATAACGACCTTCACGTTCATATTTTTCATATAA 123777 Query 53947 TCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAA 54006 | ||||||| || || |||||| || | | ||||||||||||| ||||||||| || Sbjct 123776 TTGTTCAAATTCTTCACCCCAACAATCATGTAGACCAGGACATTCATTCGGACACATTAA 123717 Query 54007 CGACCACTCTCCGT-CATCCTTC-ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 54064 |||||| | | | ||| ||| || ||||||||||| | ||| || ||||| | || Sbjct 123716 TGACCACATTGCATCCAT--TTCAACACGTTTCATAAATAAATCCGGTATCCATAATGC- 123660 Query 54065 ATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 54123 ||| |||||||| | | | ||| || || ||||||||||| | ||| | || Sbjct 123659 ATAGAATAGATCACGTGCACGTAATTCTTCCGAACCAGTATTCTTTTTCAAATCTAAAAA 123600 Query 54124 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTT 54183 || | ||||| |||||||| ||||| | || || | | | || || ||||| Sbjct 123599 TGCAAATATATCTGAATGCCATGGTTCTAGATAGATAGCAAATGCACCTGGACGTTTTCC 123540 Query 54184 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 54243 || || ||||| | || | || || |||||| | || | |||||||||| | || Sbjct 123539 ACCACCTTGATCAACATAACGTGCTGTATTATTAAATACACGTAACATTGGAACGAGTCC 123480 Query 54244 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA-CTA-ATT 54301 ||| || |||||| || || | ||||| ||| | ||||||| | || ||| Sbjct 123479 ATTTGAAAAACCATTAGTACCAGCAATATATGATCCTTGTGAACGAATACAATGTACATT 123420 Query 54302 GATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 54361 || ||| || || || || ||| || | | ||| || |||||||| |||||||| Sbjct 123419 --TAAACCAATACCACCAGCAGATTTTGAAACAATTGCACAACGTTTTAATGTATCATAT 123362 Query 54362 ATGCCCTCTATACTATCATCCATCA-TGTTAAGTAGAAAACAGCTAGACATTTG 54414 || || || ||||||||||| || |||||| || |||||| |||||||| Sbjct 123361 ATTCCTTCAATACTATCATCGGACATTGTTAA-CAGGAAACAGGATGACATTTG 123309 Score = 181 bits (200), Expect = 1e-40 Identities = 429/643 (67%), Gaps = 24/643 (4%) Strand=Plus/Minus Query 54428 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 54487 || ||||| ||||| || || || || || ||||||||| |||||| | ||||| || Sbjct 123222 CCAGCATTGAATAATGTTGGTGATGCATGTGTAAACCATCCTTCAGACATAAGATTATAA 123163 Query 54488 GTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 54547 || ||||| || || || ||||| || ||| || || || || |||||||| ||||| Sbjct 123162 GTTTCGATTGCCGAATCAATATCATCTTTATGTATACCAACAGCAACACGCATCAACATA 123103 Query 54548 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTT 54607 || || |||| |||||| | || || ||||||| || || | | ||| ||| Sbjct 123102 TGTTGTGGTCGTTCAACAACATTACCATTAATTTTCAATAAATATGCACGATACAATGTT 123043 Query 54608 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTT------- 54660 || ||||||||||| || | | | || || || ||||| || |||| || Sbjct 123042 TTGAAACCAAAATAATTAAAACGATAATCACGATCATAAATTATTGCTGAATTTAATCGT 122983 Query 54661 ---GAGTTTATCCTTATATTTGTTAACTACATCCATGGTAA-TACTTGAAATAATCGGAG 54716 || ||| | | ||| || ||| ||||| || || || | | | | || || Sbjct 122982 TCAGAATTTTCCATAATAATT-TTATAAACATCATCGGCAATTAATGGCATTGATTGGCC 122924 Query 54717 AATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATA 54776 | ||| ||||||| |||| || | ||||| | || || || ||| Sbjct 122923 GGT-TTTATCATTTTT--CATTG-------TATACAAATCATGTATAACATCGGAAAAAT 122874 Query 54777 GtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAAT 54836 ||| ||||||||||| |||| |||||||| || || | || || || | ||||||| Sbjct 122873 TTTTCTTTGTTTCTTTTTGTAAATTTGATATGGAAATACGTGCAGCAAGTACAGCATAAT 122814 Query 54837 CCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCG 54896 | ||||| ||| || || || || ||||| || | || ||||||| ||| | Sbjct 122813 CAACATGTTTTGTTGTCATTGTAGCAGCAATTTCCGCAGCCAATTCATCCAATTGTACGG 122754 Query 54897 TTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATAT 54956 |||| | || ||| | || | || || ||||| | |||||| ||||| ||| Sbjct 122753 TTGTCATACCGGAATAAAGACCATTAATTACTTTCATTGTAATTTTAGGTGGATCAATAA 122694 Query 54957 GATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGA 55016 ||| | || || |||||||| | ||||| ||| | ||||| ||||| || ||||||| Sbjct 122693 AATCCATATTCAAACCATAACAAAGTTTTCGAATTCTTGATGTTATTTTGTCGAACATGA 122634 Query 55017 CATTTTCCTTGT-ATCCATTTCGTTTAATGACAAACATTTTTG 55058 | || ||||| |||| |||||||| ||||||||| ||| Sbjct 122633 -TTGTTTCTTGTCGACCATCACGTTTAATAACAAACATTGTTG 122592 >seq1101 Length=1082900 Score = 149 bits (164), Expect = 7e-31 Identities = 598/929 (64%), Gaps = 22/929 (2%) Strand=Plus/Minus Query 53704 TGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTC 53763 || ||| || || |||||||||| || | |||| || | | ||||| || | || Sbjct 175781 TGAAATTGAAGCAAGATTACAAATAGCGATTTCATCAGGAGAAGTGTATTGAATAACTTC 175722 Query 53764 AGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 53823 ||| || | ||| ||| ||||||||| | ||||| || ||| |||| || Sbjct 175721 AGTACATAAATTGGAGGACTGGATGGTTCCGAGGTTTTGCTGGTTAGACTTTCGATTTGC 175662 Query 53824 CGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTT 53883 ||||| ||| ||| || | || | |||||||| || || | ||| ||| || | Sbjct 175661 GGCATCTTTAAAAACCATATAGGGGTTTCCAGTTTCCATTTGAGTGACTAAAATTGCCAT 175602 Query 53884 CCAGACGACACGAGCCTTTATTATAGATT--TGTATCTCTTTTCTCTTTCGTATAGTGTA 53941 ||| | ||||||| || ||| | || |||||| |||| |||| ||| | Sbjct 175601 CCAAAGTTCACGAGCTTTGATTT--GCTTGATGTATCGACCTTCTTTTTCATATGATTCG 175544 Query 53942 TACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACAC 54001 || | | || |||| | |||||||| | || | || || ||| | ||||||| Sbjct 175543 TAGAGTTTCTCGAACTTTTTCCCCCAAACCTCGTGTAGACCGGGTGATTGGTGCGGACAC 175484 Query 54002 ATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 54061 || | ||| | | ||| | | |||| ||||||||| | |||||||||||| | Sbjct 175483 ATGAGGCTCCAGTAGCTGTCTTGGTCTACTCTTTTCATAAACAAATCAGGAATCCACAAT 175424 Query 54062 GCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 54121 || || | ||| | | | | ||| || | ||| ||| ||||| || || | | Sbjct 175423 GCGTAGAACAAATCCCGAGCACGAGCTTCTTCATGTCCGTGATTTTTTTTTAGTTCTAAG 175364 Query 54122 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTG 54181 || | | |||||| ||||||| || |||| |||| | || | | | || || | Sbjct 175363 AATTCGAAAATATCCAAATGCCATGGCTCCAGATATACTG-CAAA---GCCGCCCTTTCG 175308 Query 54182 TTT----CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 54237 | | || || || || | || | ||||| | ||| ||||| | | ||| || || Sbjct 175307 TCTTCCACCACCTTGGTCGACATAACGGGCGGTTTCATTGAAAACTTTGAGCATAGGTAT 175248 Query 54238 AATACCATTGGATGCACCATTGGT-CCCGGAGATATAGCTTCCACTG-GCACGAATATTA 54295 || ||| ||| |||||| || || || | || ||| || || || || ||| Sbjct 175247 AACACCGTTGCTAATACCATTTGTACCTTGAATTTCAG--TCCCGTGTGCCCGTATTTTA 175190 Query 54296 CTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 54355 || | ||| || | || ||||| |||| || | ||||||| |||| |||||| Sbjct 175189 TGTATAGCTAGCCCAACTCCACCTGCGTATTTACTAATAATTGCGCATTGTTTCAACGTA 175130 Query 54356 TCATAGATGCCCTCTATACTATCATCCAT--CATGTTAAGTAGAAAACAGCTAGACATTT 54413 | ||| || || || || ||| | || ||| | | | | |||||||| ||||| Sbjct 175129 TTATAAATTCCGTCAATTGAATC--CGATTGCATTTGCAACAAATAACAGCTACTCATTT 175072 Query 54414 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 54473 | || | |||| | |||||||| | || |||| ||||| | || |||| | Sbjct 175071 GAGGAAAGCGAGTTGCGGCATTAAACAGTGTGGGAGTTGCGTGAATGAAGTATTTCTGGC 175012 Query 54474 AAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCG 54532 |||| |||||| ||||| ||| ||| | || ||| || || ||| || || Sbjct 175011 TGAGTAAATTGTATGTCTCAATAATCTTGTCAAGGTCACCAATG-TGGATTTGCACAGCA 174953 Query 54533 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAG 54592 || ||||| ||||||| |||||| |||| || || || || ||||| ||| || Sbjct 174952 ACTCGCATGAACATGTATTGAGGTGTTTCTACAATTTTCTTACCAGATTTCAACAAATAA 174893 Query 54593 GATTTTTCCAAAGTTTTAAAACCAAAATA 54621 |||||||||| || || |||||||| || Sbjct 174892 GATTTTTCCATTGTCTTGAAACCAAAGTA 174864 >seq990 Length=1130841 Score = 104 bits (114), Expect = 3e-17 Identities = 171/244 (70%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 24410 ATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTA 24469 |||||||| | ||||||| |||| || || || ||||| || |||| |||||| |||| Sbjct 1099107 ATCAATCAGCAAACTATACGTTTCAGAGTGGATATTTTCCATCGCCAACTGAAATGCGTA 1099048 Query 24470 GAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATT 24529 |||| |||| || | | || | || | |||| || | | | ||||| Sbjct 1099047 GAAATCTCTAATTTCAGGGACTTGAAACTCGAGGAAAAAACGACGTCCAATGTTTTCTAA 1098988 Query 24530 CACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-T 24588 || ||||||||||| |||||||||||||||| |||| ||| || ||| ||||||| | Sbjct 1098987 AACGATTCCGTCACTTGCTGCAAAAAACGCCAGCACATATTTAATGAAACTTTTTTCGTT 1098928 Query 24589 CTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCC 24648 || | | | |||||||||||| | ||| | | | ||| | |||||| | |||| Sbjct 1098927 CTCAT-TCAAATTATTCCAATCACGCAGGTCTCCATACAAATCTATTTCTTCAGCCGTCC 1098869 Query 24649 AAAA 24652 |||| Sbjct 1098868 AAAA 1098865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593711788750560