Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq335 111 2e-19
>seq335
Length=939964
Score = 111 bits (122), Expect = 2e-19
Identities = 313/477 (66%), Gaps = 8/477 (2%)
Strand=Plus/Plus
Query 145696 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCC 145755
||||| ||| || ||||||| | || ||||| ||| || | |||| | ||||
Sbjct 24782 TGGTTATTGTAAACATGCGCGTTTGTTACGAAGTGGACGAATTCACGCGGCTTGTAGCCC 24841
Query 145756 GTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCC 145815
||||| | ||| |||| | ||||| | ||| ||| | |||||| ||||| ||
Sbjct 24842 GTGAGTTTCCCGATGATGTGGCACAGCAAGCTGTACGAGGCAACGTTGAACGGCACGCCG 24901
Query 145816 AGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC-----CGCC- 145869
|| ||| ||| || |||||| | || |||||||| ||| || || |
Sbjct 24902 AGTCCCCAGTCTCCGCTGCGCTGAAATAGGAAGCAGGAGATCTCTTTGCGTACGGCGTCG 24961
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929
| |||||| |||| || | ||| || |||||||| ||||| || |||| | || |||
Sbjct 24962 ATGTAGAATTGGCTGAGCACGTGACACGGCGGCAGCGCCATCTCGTGCAGCGCGGCAGGG 25021
Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCT-GCTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988
||||| || | || || || |||| | | | || | || ||| | ||| ||
Sbjct 25022 TTCCACGCCGAGAAGATGATTCTCCGCGATGTTGGCTCGCGTCG-GATGGTCTCTAGCAC 25080
Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048
|| | || ||||| ||||| |||||| ||| || | | | | |||| ||
Sbjct 25081 TTCGCGGATTTGGTCGACGCCTTGCCCCGAGTAGTCCGCGTCACTGCCGCGGTACTGCGC 25140
Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCC 146108
|| ||||||| |||||| || ||||||| ||||| || || || |||| |||
Sbjct 25141 TCCAAAGTGCCGCCACTGAAAGCCGTAGATCGGCCCAAGCTCGCCCGGCTTGTAGTGTTG 25200
Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165
|| ||| | | | | ||| || || | |||||||| | |||||||||||||||
Sbjct 25201 CAACCCACGCGAGTCTAAGAATTCGCGCGTGCCGTTGGCTTGCCAGATCTTGACGCC 25257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590067048980880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |