Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq335 111 2e-19 >seq335 Length=939964 Score = 111 bits (122), Expect = 2e-19 Identities = 313/477 (66%), Gaps = 8/477 (2%) Strand=Plus/Plus Query 145696 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCC 145755 ||||| ||| || ||||||| | || ||||| ||| || | |||| | |||| Sbjct 24782 TGGTTATTGTAAACATGCGCGTTTGTTACGAAGTGGACGAATTCACGCGGCTTGTAGCCC 24841 Query 145756 GTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCC 145815 ||||| | ||| |||| | ||||| | ||| ||| | |||||| ||||| || Sbjct 24842 GTGAGTTTCCCGATGATGTGGCACAGCAAGCTGTACGAGGCAACGTTGAACGGCACGCCG 24901 Query 145816 AGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC-----CGCC- 145869 || ||| ||| || |||||| | || |||||||| ||| || || | Sbjct 24902 AGTCCCCAGTCTCCGCTGCGCTGAAATAGGAAGCAGGAGATCTCTTTGCGTACGGCGTCG 24961 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 | |||||| |||| || | ||| || |||||||| ||||| || |||| | || ||| Sbjct 24962 ATGTAGAATTGGCTGAGCACGTGACACGGCGGCAGCGCCATCTCGTGCAGCGCGGCAGGG 25021 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCT-GCTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988 ||||| || | || || || |||| | | | || | || ||| | ||| || Sbjct 25022 TTCCACGCCGAGAAGATGATTCTCCGCGATGTTGGCTCGCGTCG-GATGGTCTCTAGCAC 25080 Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048 || | || ||||| ||||| |||||| ||| || | | | | |||| || Sbjct 25081 TTCGCGGATTTGGTCGACGCCTTGCCCCGAGTAGTCCGCGTCACTGCCGCGGTACTGCGC 25140 Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCC 146108 || ||||||| |||||| || ||||||| ||||| || || || |||| ||| Sbjct 25141 TCCAAAGTGCCGCCACTGAAAGCCGTAGATCGGCCCAAGCTCGCCCGGCTTGTAGTGTTG 25200 Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165 || ||| | | | | ||| || || | |||||||| | ||||||||||||||| Sbjct 25201 CAACCCACGCGAGTCTAAGAATTCGCGCGTGCCGTTGGCTTGCCAGATCTTGACGCC 25257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590067048980880