Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq458 163 2e-35 >seq458 Length=503182 Score = 163 bits (180), Expect = 2e-35 Identities = 235/330 (71%), Gaps = 6/330 (2%) Strand=Plus/Plus Query 97290 ATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTAT 97349 ||||||||| || | ||| | | ||| |||| ||||| | || || || || | Sbjct 280686 ATTCCAAGCCGTTATAATCATACGACGATCATTTGGATTTGTTTTGATTGTTTTTATAAG 280745 Query 97350 CTGCTTTAATTGATCAACGCCTTCTCCACCATAAT---TGTGCTTAAGACCTTGATATTC 97406 ||| ||||||||||||| |||| ||| ||||| | || ||| || ||||||| Sbjct 280746 CTGTTTTAATTGATCAATACCTTGACCATTATAATCAGTTTGATTATCAC---GATATTC 280802 Query 97407 TGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATC 97466 || |||||||| |||||||| || ||||||||||| || || || ||||||| | ||| Sbjct 280803 GGCACCAAAATGTCTCCATTGAAAACCATAAACAGGACCTAGATCACCTTCTTGACGATC 280862 Query 97467 ACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC 97526 | |||||||| |||| | | | | || ||||||||||||||||| | ||||| Sbjct 280863 AATAAAACCAAGACTATCAAGAAATTCTTTTGAACCATTTGCATCCCAAATTTTTACACC 280922 Query 97527 AGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCAC 97586 | | | | | ||| ||||| || ||| | |||||||| || |||||||| || Sbjct 280923 TTTTTCGGATAATTTTTTCGAATCAGTTGAACCTTTTATAAACCATAATAATTCTTCAAC 280982 Query 97587 AACACCTCTCCAAAATACTCTCTTAGTTGT 97616 |||||| | ||||||||| | || ||||| Sbjct 280983 AACACCACGCCAAAATACACGTTTTGTTGT 281012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346778412659540