Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq458 163 2e-35
>seq458
Length=503182
Score = 163 bits (180), Expect = 2e-35
Identities = 235/330 (71%), Gaps = 6/330 (2%)
Strand=Plus/Plus
Query 97290 ATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTAT 97349
||||||||| || | ||| | | ||| |||| ||||| | || || || || |
Sbjct 280686 ATTCCAAGCCGTTATAATCATACGACGATCATTTGGATTTGTTTTGATTGTTTTTATAAG 280745
Query 97350 CTGCTTTAATTGATCAACGCCTTCTCCACCATAAT---TGTGCTTAAGACCTTGATATTC 97406
||| ||||||||||||| |||| ||| ||||| | || ||| || |||||||
Sbjct 280746 CTGTTTTAATTGATCAATACCTTGACCATTATAATCAGTTTGATTATCAC---GATATTC 280802
Query 97407 TGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATC 97466
|| |||||||| |||||||| || ||||||||||| || || || ||||||| | |||
Sbjct 280803 GGCACCAAAATGTCTCCATTGAAAACCATAAACAGGACCTAGATCACCTTCTTGACGATC 280862
Query 97467 ACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC 97526
| |||||||| |||| | | | | || ||||||||||||||||| | |||||
Sbjct 280863 AATAAAACCAAGACTATCAAGAAATTCTTTTGAACCATTTGCATCCCAAATTTTTACACC 280922
Query 97527 AGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCAC 97586
| | | | | ||| ||||| || ||| | |||||||| || |||||||| ||
Sbjct 280923 TTTTTCGGATAATTTTTTCGAATCAGTTGAACCTTTTATAAACCATAATAATTCTTCAAC 280982
Query 97587 AACACCTCTCCAAAATACTCTCTTAGTTGT 97616
|||||| | ||||||||| | || |||||
Sbjct 280983 AACACCACGCCAAAATACACGTTTTGTTGT 281012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346778412659540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |