Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq1 134 2e-26
seq391 122 1e-22
>seq1
Length=3593316
Score = 134 bits (148), Expect = 2e-26
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
||||||| | ||||| |||||||||||||| || |||||||| || |||||||| |
Sbjct 1031598 TTCCACCACGAAGTCGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGG 1031657
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| | |||| | ||| || ||||||||||| ||||| ||||| | |||||||| || |
Sbjct 1031658 ACAATGTTCGACCATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTG 1031717
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
|||| |||||||| ||||| |||||| || ||| |
Sbjct 1031718 GAATACCTTCTTTGTCTTGGATTTTTGCTTTGACATTTTCGATAGTATCCGATGGTTCCA 1031777
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|||| | ||||| |||||||| || |||||||| | ||| |||||||||
Sbjct 1031778 CTTCCAAGGTGATGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCATT 1031827
Score = 125 bits (138), Expect = 1e-23
Identities = 101/122 (83%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125
|||||||||||||| || |||||||| |||||||||||| || | |||| || |||
Sbjct 1033042 AATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCGACAATGTTCGGCCATCT 1033101
Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185
|| | |||||| |||||||| ||||||| ||||||||| || ||||| |||||||||||
Sbjct 1033102 TCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTTATCC 1033161
Query 146186 TG 146187
||
Sbjct 1033162 TG 1033163
Score = 123 bits (136), Expect = 4e-23
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 146066 AATACCAAATGTAAAGTAGATT-CTTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124
||||||||||| || || |||| |||| || ||||||||||| || | ||| | | |||
Sbjct 1033270 AATACCAAATGCAATGTTGATTCCTTTTGA-ATATTATAATCGGACAAAGTACGACCATC 1033328
Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184
|| |||||||| |||||||| ||||||| ||||||||| || ||||| |||||||||||
Sbjct 1033329 TTCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGAATGCCTTCTTTATC 1033388
Query 146185 TTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACTTCTAGTGTGATTGT 146244
||| || || || ||| ||||| | ||||| ||
Sbjct 1033389 TTGAATTTTGGCTTTAACATTTTCGATGGTGTCCGATGGTTCGACTTCCAAAGTGATGGT 1033448
Query 146245 TTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||||| || |||||||| | ||| ||||||||
Sbjct 1033449 TTTACCAGTCAATGTTTTTACGAAGATTTGCAT 1033481
Score = 107 bits (118), Expect = 3e-18
Identities = 224/327 (69%), Gaps = 9/327 (3%)
Strand=Plus/Plus
Query 209102 GTTCATGAATATGGTGATGTGAGTAATGGTTGTACATCAGCAGGAGAACATTTTAATCCA 209161
|||||||||| |||||| | |||||||||||||| || || | |||| |||||||
Sbjct 603596 GTTCATGAATTTGGTGACAATACAAATGGTTGTACATCGGCTGGTGCTCATTATAATCCA 603655
Query 209162 TATAATAGACAACATGGAGATATTAGTGATAAAATACATCGTCATGTTGGTGATTTTGGT 209221
| |||| | |||||| | ||||||| | | | ||||||||||||||||| ||
Sbjct 603656 TTGAATAAAACACATGGTGCACCTAGTGATGA---AGAACGTCATGTTGGTGATTTAGGC 603712
Query 209222 AATGTGTATGCAGACGAAAATGGCGTTGCTAATATTGATTTTCACGATGATATTATATCA 209281
||| | | || | || || || ||||||||| ||| || | ||| |||| ||||
Sbjct 603713 AATATTGAAGCCAATGATAAAGGTGTTGCTAATGTTGTAATTGAAGAT-TCATTA-ATCA 603770
Query 209282 --TTGTGTGG-AACAAATAATATAATAGGAAGAACATTAGTAGTTCATGATTCGCCTGAT 209338
||| ||| | |||| | || | ||| | |||| || || |||| | || |||
Sbjct 603771 GTTTGACTGGTGAAAAATCA-ATTGTTGGACGTTCATTGGTTGTACATGCTGATCCAGAT 603829
Query 209339 GATTTAGGAAAAACTGATCACCCTTTGAGTAAAACAAGTGGTAATTCTGGCGGAAGATTA 209398
||| | ||| || || || || ||||||| |||||| | || ||| | |
Sbjct 603830 GATCTTGGACGTGGTGGACATGAATTAAGCAAAACAACCGGTAATGCAGGTGGACGTCTT 603889
Query 209399 GGTTGTGGTATTATTGGTATTGCAAAA 209425
| ||||||| ||||||| || |||||
Sbjct 603890 GTTTGTGGTGTTATTGGCGTTACAAAA 603916
Score = 107 bits (118), Expect = 3e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128
||||||||||| || |||||||| ||||| ||||| || | || | || ||| ||
Sbjct 1031846 ACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCGGATAAGGTACGGCCATCTTCC 1031905
Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
|||||||| ||||| |||||||| | ||||||||| || ||||| ||||| ||||||||
Sbjct 1031906 AATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCCTTATCTTG 1031964
Score = 107 bits (118), Expect = 3e-18
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125
||||||||||| ||||| || ||||| || || ||||| || | || | | |||
Sbjct 1032299 AATACCAAATGCAAAGTTGACTCTTTTTGGATGTTGTAATCCGATAATGTACGACCATCT 1032358
Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185
||||||||||| || ||||| ||||| | |||||| || || |||||||| ||||||||
Sbjct 1032359 TCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGTGGAATTCCCTCTTTATCC 1032418
Query 146186 TGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACTTCTAGTGTGATTGTT 146245
|| ||||| || ||| || |||| |||||| |||
Sbjct 1032419 TGAATTTTTGCCTTCACATTTTCGATTGTATCAGATGGTTCAACGTCTAATGTGATGGTT 1032478
Query 146246 TTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
||||| || |||||||| | ||| ||||||||
Sbjct 1032479 TTACCAGTCAATGTTTTCACGAAAATTTGCAT 1032510
Score = 86.0 bits (94), Expect = 9e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125
||||| | ||| | || |||||||| || || ||||| || | |||| || |||
Sbjct 1032527 AATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCGACAATGTTCGGCCATCT 1032586
Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185
|| | ||||| ||||| |||||||| | |||||| || || |||||||||||||| |||
Sbjct 1032587 TCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTGGAATTCCTTCTTTGTCT 1032646
Query 146186 TG 146187
||
Sbjct 1032647 TG 1032648
>seq391
Length=841353
Score = 122 bits (134), Expect = 1e-22
Identities = 109/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||||||| | || || || ||||| || |||||||| ||||| || |||||
Sbjct 251390 CCTCCTCTAAGCCGTAGCACTAAGTGTAACGTCGATTCTTTCTGGATATTGTAGTCTGAC 251449
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||| ||| ||||||||||||||||||||||| |||| ||| ||||| || |||
Sbjct 251450 AAAGTTCTAGAATCTTCTAATTGTTTTCCAGCAAAAATTAATCGTTGTTGATCAGGCGGA 251509
Query 146171 ATTCCTTCTTTATCTTG 146187
|||||||| ||||| ||
Sbjct 251510 ATTCCTTCCTTATCCTG 251526
Score = 107 bits (118), Expect = 3e-18
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||||||||||| | || || ||||| || |||||||| ||||| || |||||
Sbjct 251162 CCACCTCTAAGTCGAAGCACTAAGTGTAATGTGGATTCTTTCTGGATATTGTAGTCTGAC 251221
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||| ||| ||||| ||||||||||||||||| |||| || || || || |||
Sbjct 251222 AAAGTTCTAGAATCTTCTAACTGTTTTCCAGCAAAAATTAATCGCTGTTGGTCTGGCGGA 251281
Query 146171 ATTCCTTCTTTATCTTG 146187
|| |||||||| || ||
Sbjct 251282 ATCCCTTCTTTGTCCTG 251298
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||||||| | | || ||||| | || |||||||| || || || || ||
Sbjct 730826 CCTCCTCTAAGACGAAGCACTAAATGAATTGTGGATTCTTTCTGGATGTTGTAGTCGGAT 730885
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| | | | || |||| ||| || ||||||||||| | ||||||||||||||| |||
Sbjct 730886 AAAGTGCGGTTGTCGTCTAGTTGCTTACCAGCAAAAATAAGTCTTTGCTGATCCGGGGGA 730945
Query 146171 ATTCCTTCTTTATCTTG 146187
||||||||||| |||||
Sbjct 730946 ATTCCTTCTTTGTCTTG 730962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743514113226240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |